data_GST # _chem_comp.id GST _chem_comp.name "GERANYL S-THIOLODIPHOSPHATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H20 O6 P2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "S-[(2E)-3,7-DIMETHYLOCTA-2,6-DIENYL] TRIHYDROGEN THIODIPHOSPHATE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-05-11 _chem_comp.pdbx_modified_date 2021-03-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 330.275 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GST _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1ZB6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GST PA PA P 0 1 N N N 19.534 27.534 3.619 4.379 0.240 0.051 PA GST 1 GST O1A O1A O 0 1 N N N 19.609 28.204 2.288 4.670 1.481 -0.933 O1A GST 2 GST O2A O2A O 0 1 N N N 20.362 26.298 3.674 4.161 -0.984 -0.752 O2A GST 3 GST O3A O3A O 0 1 N N N 18.121 27.257 4.002 5.639 0.024 1.029 O3A GST 4 GST O1B O1B O 0 1 N N N 20.124 28.585 4.679 3.065 0.547 0.928 O1B GST 5 GST PB PB P 0 1 N N R 20.529 28.366 6.198 1.795 0.229 -0.009 PB GST 6 GST O2B O2B O 0 1 N N N 20.225 29.576 7.030 1.838 1.093 -1.210 O2B GST 7 GST O3B O3B O 0 1 N N N 19.816 27.203 6.821 1.833 -1.317 -0.458 O3B GST 8 GST S1 S1 S 0 1 N N N 22.118 28.106 6.368 0.009 0.607 1.069 S1 GST 9 GST C1 C1 C 0 1 N N N 22.785 28.278 7.611 -1.219 0.176 -0.194 C1 GST 10 GST C2 C2 C 0 1 N N N 23.948 27.320 7.744 -1.293 -1.323 -0.332 C2 GST 11 GST C3 C3 C 0 1 N N N 25.237 27.674 7.899 -2.385 -1.960 0.013 C3 GST 12 GST C10 C10 C 0 1 N N N 25.862 28.840 7.172 -2.516 -3.436 -0.261 C10 GST 13 GST C4 C4 C 0 1 N N N 26.165 26.878 8.794 -3.511 -1.216 0.685 C4 GST 14 GST C5 C5 C 0 1 N N N 27.559 27.525 8.868 -4.528 -0.772 -0.368 C5 GST 15 GST C6 C6 C 0 1 N N N 28.644 26.503 9.103 -5.654 -0.028 0.304 C6 GST 16 GST C7 C7 C 0 1 N N N 29.414 26.374 10.200 -5.965 1.182 -0.089 C7 GST 17 GST C9 C9 C 0 1 N N N 30.505 27.374 10.507 -5.290 1.780 -1.296 C9 GST 18 GST C8 C8 C 0 1 N N N 29.296 25.257 11.211 -6.998 1.978 0.667 C8 GST 19 GST H1A H1A H 0 1 N N N 19.080 28.992 2.252 4.806 2.257 -0.371 H1A GST 20 GST H3A H3A H 0 1 N N N 18.073 26.830 4.849 6.403 -0.157 0.465 H3A GST 21 GST H3B H3B H 0 1 N N N 20.058 27.071 7.730 1.803 -1.844 0.352 H3B GST 22 GST H11 1H1 H 0 1 N N N 23.105 29.335 7.761 -0.928 0.614 -1.149 H11 GST 23 GST H12 2H1 H 0 1 N N N 22.080 28.189 8.470 -2.195 0.562 0.100 H12 GST 24 GST H2 H2 H 0 1 N N N 23.842 26.222 7.725 -0.446 -1.873 -0.715 H2 GST 25 GST H101 1H10 H 0 0 N N N 26.930 29.133 7.300 -1.610 -3.796 -0.748 H101 GST 26 GST H102 2H10 H 0 0 N N N 25.687 28.685 6.081 -2.660 -3.969 0.678 H102 GST 27 GST H103 3H10 H 0 0 N N N 25.240 29.740 7.388 -3.372 -3.610 -0.913 H103 GST 28 GST H41 1H4 H 0 1 N N N 25.727 26.729 9.809 -3.112 -0.340 1.197 H41 GST 29 GST H42 2H4 H 0 1 N N N 26.225 25.810 8.476 -3.998 -1.869 1.408 H42 GST 30 GST H51 1H5 H 0 1 N N N 27.769 28.137 7.960 -4.927 -1.648 -0.880 H51 GST 31 GST H52 2H5 H 0 1 N N N 27.590 28.332 9.636 -4.042 -0.118 -1.091 H52 GST 32 GST H6 H6 H 0 1 N N N 28.915 25.733 8.360 -6.204 -0.493 1.108 H6 GST 33 GST H91 1H9 H 0 1 N N N 31.142 27.267 11.415 -5.738 2.747 -1.522 H91 GST 34 GST H92 2H9 H 0 1 N N N 31.175 27.438 9.618 -4.227 1.911 -1.091 H92 GST 35 GST H93 3H9 H 0 1 N N N 30.048 28.391 10.522 -5.415 1.114 -2.150 H93 GST 36 GST H81 1H8 H 0 1 N N N 29.933 25.150 12.119 -7.985 1.784 0.247 H81 GST 37 GST H82 2H8 H 0 1 N N N 28.236 25.247 11.558 -6.986 1.683 1.717 H82 GST 38 GST H83 3H8 H 0 1 N N N 29.379 24.300 10.644 -6.770 3.040 0.586 H83 GST 39 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GST PA O1A SING N N 1 GST PA O2A DOUB N N 2 GST PA O3A SING N N 3 GST PA O1B SING N N 4 GST O1A H1A SING N N 5 GST O3A H3A SING N N 6 GST O1B PB SING N N 7 GST PB O2B DOUB N N 8 GST PB O3B SING N N 9 GST PB S1 SING N N 10 GST O3B H3B SING N N 11 GST S1 C1 SING N N 12 GST C1 C2 SING N N 13 GST C1 H11 SING N N 14 GST C1 H12 SING N N 15 GST C2 C3 DOUB N E 16 GST C2 H2 SING N N 17 GST C3 C10 SING N N 18 GST C3 C4 SING N N 19 GST C10 H101 SING N N 20 GST C10 H102 SING N N 21 GST C10 H103 SING N N 22 GST C4 C5 SING N N 23 GST C4 H41 SING N N 24 GST C4 H42 SING N N 25 GST C5 C6 SING N N 26 GST C5 H51 SING N N 27 GST C5 H52 SING N N 28 GST C6 C7 DOUB N N 29 GST C6 H6 SING N N 30 GST C7 C9 SING N N 31 GST C7 C8 SING N N 32 GST C9 H91 SING N N 33 GST C9 H92 SING N N 34 GST C9 H93 SING N N 35 GST C8 H81 SING N N 36 GST C8 H82 SING N N 37 GST C8 H83 SING N N 38 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GST SMILES ACDLabs 10.04 "O=P(O)(OP(=O)(O)O)SC/C=C(/CC/C=C(\C)C)C" GST SMILES_CANONICAL CACTVS 3.341 "CC(C)=CCCC(/C)=C/CS[P@@](O)(=O)O[P](O)(O)=O" GST SMILES CACTVS 3.341 "CC(C)=CCCC(C)=CCS[P](O)(=O)O[P](O)(O)=O" GST SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=CCCC(=CCS[P@](=O)(O)OP(=O)(O)O)C)C" GST SMILES "OpenEye OEToolkits" 1.5.0 "CC(=CCCC(=CCSP(=O)(O)OP(=O)(O)O)C)C" GST InChI InChI 1.03 "InChI=1S/C10H20O6P2S/c1-9(2)5-4-6-10(3)7-8-19-18(14,15)16-17(11,12)13/h5,7H,4,6,8H2,1-3H3,(H,14,15)(H2,11,12,13)/b10-7+" GST InChIKey InChI 1.03 AKIXWSDUEPPMKM-JXMROGBWSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GST "SYSTEMATIC NAME" ACDLabs 10.04 "S-[(2E)-3,7-dimethylocta-2,6-dien-1-yl] trihydrogen thiodiphosphate" GST "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3,7-dimethylocta-2,6-dienylsulfanyl-phosphonooxy-phosphinic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GST "Create component" 2005-05-11 RCSB GST "Modify descriptor" 2011-06-04 RCSB GST "Modify synonyms" 2021-03-13 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id GST _pdbx_chem_comp_synonyms.name "S-[(2E)-3,7-DIMETHYLOCTA-2,6-DIENYL] TRIHYDROGEN THIODIPHOSPHATE" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? ##