data_GT0 # _chem_comp.id GT0 _chem_comp.name "5-(hydroxymethyl)-4-(methoxymethyl)-2-methylpyridin-3-ol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H13 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ginkgotoxin _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-04-13 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 183.204 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GT0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4EN4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GT0 C8 C8 C 0 1 Y N N 28.731 8.124 39.588 1.102 1.725 0.183 C8 GT0 1 GT0 N1 N1 N 0 1 Y N N 29.626 8.826 38.749 2.188 0.986 0.282 N1 GT0 2 GT0 C7 C7 C 0 1 Y N N 30.567 8.151 37.962 2.158 -0.320 0.104 C7 GT0 3 GT0 C4 C4 C 0 1 Y N N 30.638 6.733 38.008 0.968 -0.966 -0.197 C4 GT0 4 GT0 C6 C6 C 0 1 Y N N 29.743 6.007 38.858 -0.198 -0.216 -0.309 C6 GT0 5 GT0 C2 C2 C 0 1 Y N N 28.776 6.714 39.659 -0.122 1.154 -0.114 C2 GT0 6 GT0 C1 C1 C 0 1 N N N 29.843 4.461 38.900 -1.513 -0.877 -0.635 C1 GT0 7 GT0 O3 O3 O 0 1 N N N 30.372 4.011 40.177 -2.167 -1.259 0.577 O3 GT0 8 GT0 C3 C3 C 0 1 N N N 31.794 4.242 40.282 -3.429 -1.898 0.380 C3 GT0 9 GT0 C5 C5 C 0 1 N N N 27.789 5.966 40.582 -1.358 2.009 -0.219 C5 GT0 10 GT0 O2 O2 O 0 1 N N N 26.923 6.890 41.271 -1.015 3.374 0.029 O2 GT0 11 GT0 C9 C9 C 0 1 N N N 31.498 8.962 37.080 3.429 -1.120 0.228 C9 GT0 12 GT0 O1 O1 O 0 1 N N N 31.570 6.048 37.230 0.942 -2.312 -0.381 O1 GT0 13 GT0 H1 H1 H 0 1 N N N 28.009 8.669 40.178 1.167 2.792 0.341 H1 GT0 14 GT0 H2 H2 H 0 1 N N N 28.841 4.031 38.753 -2.145 -0.178 -1.183 H2 GT0 15 GT0 H3 H3 H 0 1 N N N 30.510 4.121 38.094 -1.334 -1.761 -1.246 H3 GT0 16 GT0 H4 H4 H 0 1 N N N 32.152 3.888 41.260 -3.861 -2.157 1.347 H4 GT0 17 GT0 H5 H5 H 0 1 N N N 32.314 3.696 39.482 -4.101 -1.221 -0.148 H5 GT0 18 GT0 H6 H6 H 0 1 N N N 31.999 5.318 40.184 -3.290 -2.804 -0.210 H6 GT0 19 GT0 H7 H7 H 0 1 N N N 27.176 5.283 39.975 -1.780 1.916 -1.219 H7 GT0 20 GT0 H8 H8 H 0 1 N N N 28.359 5.386 41.323 -2.091 1.680 0.517 H8 GT0 21 GT0 H9 H9 H 0 1 N N N 26.326 6.408 41.831 -1.764 3.983 -0.022 H9 GT0 22 GT0 H10 H10 H 0 1 N N N 31.278 10.033 37.200 3.918 -1.180 -0.744 H10 GT0 23 GT0 H11 H11 H 0 1 N N N 32.541 8.767 37.371 4.096 -0.633 0.940 H11 GT0 24 GT0 H12 H12 H 0 1 N N N 31.351 8.673 36.029 3.194 -2.125 0.579 H12 GT0 25 GT0 H13 H13 H 0 1 N N N 31.483 5.114 37.380 0.778 -2.817 0.428 H13 GT0 26 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GT0 C9 C7 SING N N 1 GT0 O1 C4 SING N N 2 GT0 C7 C4 DOUB Y N 3 GT0 C7 N1 SING Y N 4 GT0 C4 C6 SING Y N 5 GT0 N1 C8 DOUB Y N 6 GT0 C6 C1 SING N N 7 GT0 C6 C2 DOUB Y N 8 GT0 C1 O3 SING N N 9 GT0 C8 C2 SING Y N 10 GT0 C2 C5 SING N N 11 GT0 O3 C3 SING N N 12 GT0 C5 O2 SING N N 13 GT0 C8 H1 SING N N 14 GT0 C1 H2 SING N N 15 GT0 C1 H3 SING N N 16 GT0 C3 H4 SING N N 17 GT0 C3 H5 SING N N 18 GT0 C3 H6 SING N N 19 GT0 C5 H7 SING N N 20 GT0 C5 H8 SING N N 21 GT0 O2 H9 SING N N 22 GT0 C9 H10 SING N N 23 GT0 C9 H11 SING N N 24 GT0 C9 H12 SING N N 25 GT0 O1 H13 SING N N 26 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GT0 SMILES ACDLabs 12.01 "Oc1c(c(cnc1C)CO)COC" GT0 InChI InChI 1.03 "InChI=1S/C9H13NO3/c1-6-9(12)8(5-13-2)7(4-11)3-10-6/h3,11-12H,4-5H2,1-2H3" GT0 InChIKey InChI 1.03 SVINQHQHARVZFF-UHFFFAOYSA-N GT0 SMILES_CANONICAL CACTVS 3.370 "COCc1c(O)c(C)ncc1CO" GT0 SMILES CACTVS 3.370 "COCc1c(O)c(C)ncc1CO" GT0 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1c(c(c(cn1)CO)COC)O" GT0 SMILES "OpenEye OEToolkits" 1.7.6 "Cc1c(c(c(cn1)CO)COC)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GT0 "SYSTEMATIC NAME" ACDLabs 12.01 "5-(hydroxymethyl)-4-(methoxymethyl)-2-methylpyridin-3-ol" GT0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "5-(hydroxymethyl)-4-(methoxymethyl)-2-methyl-pyridin-3-ol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GT0 "Create component" 2012-04-13 RCSB GT0 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id GT0 _pdbx_chem_comp_synonyms.name ginkgotoxin _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##