data_GT3 # _chem_comp.id GT3 _chem_comp.name "2-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-N-[(2R,3R)-1,3-bis(oxidanyl)butan-2-yl]ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H16 N6 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-03 _chem_comp.pdbx_modified_date 2020-11-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 296.283 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GT3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7BPF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GT3 O6 O1 O 0 1 N N N -5.676 -13.702 -0.468 5.268 0.731 0.850 O6 GT3 1 GT3 C6 C1 C 0 1 N N N -6.096 -12.735 -1.132 4.275 0.178 0.408 C6 GT3 2 GT3 N1 N1 N 0 1 N N N -6.832 -13.043 -2.272 4.249 -1.162 0.232 N1 GT3 3 GT3 C2 C2 C 0 1 N N N -7.349 -12.056 -3.085 3.132 -1.770 -0.259 C2 GT3 4 GT3 N2 N2 N 0 1 N N N -8.026 -12.442 -4.200 3.135 -3.132 -0.427 N2 GT3 5 GT3 N3 N3 N 0 1 N N N -7.150 -10.789 -2.744 2.053 -1.089 -0.575 N3 GT3 6 GT3 C4 C3 C 0 1 Y N N -6.419 -10.501 -1.612 2.005 0.240 -0.428 C4 GT3 7 GT3 C5 C4 C 0 1 Y N N -5.916 -11.448 -0.816 3.121 0.923 0.071 C5 GT3 8 GT3 N7 N4 N 0 1 Y N N -5.278 -10.855 0.219 2.799 2.238 0.118 N7 GT3 9 GT3 C8 C5 C 0 1 Y N N -5.392 -9.561 0.051 1.584 2.400 -0.316 C8 GT3 10 GT3 N9 N5 N 0 1 Y N N -6.113 -9.338 -1.060 1.051 1.192 -0.663 N9 GT3 11 GT3 C2B C6 C 0 1 N N N -6.384 -8.024 -1.499 -0.295 0.958 -1.192 C2B GT3 12 GT3 C2A C7 C 0 1 N N N -7.890 -7.744 -1.424 -1.222 0.592 -0.062 C2A GT3 13 GT3 O2A O2 O 0 1 N N N -8.681 -8.477 -0.823 -0.800 0.533 1.074 O2A GT3 14 GT3 "N2'" N6 N 0 1 N N N -8.269 -6.578 -1.978 -2.520 0.331 -0.312 "N2'" GT3 15 GT3 "C2'" C8 C 0 1 N N R -9.682 -6.181 -1.901 -3.421 -0.025 0.786 "C2'" GT3 16 GT3 "C3'" C9 C 0 1 N N R -9.941 -5.370 -0.618 -4.859 0.331 0.402 "C3'" GT3 17 GT3 C3A C10 C 0 1 N N N -9.843 -6.255 0.644 -4.931 1.808 0.008 C3A GT3 18 GT3 "O3'" O3 O 0 1 N N N -9.008 -4.296 -0.522 -5.271 -0.477 -0.702 "O3'" GT3 19 GT3 "C1'" C11 C 0 1 N N N -10.086 -5.328 -3.100 -3.324 -1.527 1.060 "C1'" GT3 20 GT3 "O1'" O4 O 0 1 N N N -11.475 -5.586 -3.385 -3.806 -2.250 -0.074 "O1'" GT3 21 GT3 H1 H1 H 0 1 N N N -6.990 -14.002 -2.507 5.029 -1.693 0.456 H1 GT3 22 GT3 H2 H2 H 0 1 N N N -8.407 -11.753 -4.817 2.347 -3.579 -0.775 H2 GT3 23 GT3 H3 H3 H 0 1 N N N -8.143 -13.414 -4.403 3.924 -3.647 -0.198 H3 GT3 24 GT3 H4 H4 H 0 1 N N N -4.976 -8.802 0.697 1.071 3.348 -0.387 H4 GT3 25 GT3 H5 H5 H 0 1 N N N -6.044 -7.910 -2.539 -0.656 1.864 -1.679 H5 GT3 26 GT3 H6 H6 H 0 1 N N N -5.848 -7.308 -0.858 -0.264 0.143 -1.915 H6 GT3 27 GT3 H7 H7 H 0 1 N N N -7.600 -5.991 -2.435 -2.858 0.378 -1.221 H7 GT3 28 GT3 H8 H8 H 0 1 N N N -10.314 -7.081 -1.879 -3.137 0.527 1.682 H8 GT3 29 GT3 H9 H9 H 0 1 N N N -10.963 -4.966 -0.671 -5.517 0.149 1.252 H9 GT3 30 GT3 H10 H10 H 0 1 N N N -10.033 -5.643 1.538 -4.272 1.989 -0.841 H10 GT3 31 GT3 H11 H11 H 0 1 N N N -10.590 -7.060 0.586 -5.955 2.061 -0.266 H11 GT3 32 GT3 H12 H12 H 0 1 N N N -8.836 -6.693 0.707 -4.616 2.424 0.850 H12 GT3 33 GT3 H13 H13 H 0 1 N N N -9.175 -3.801 0.272 -4.728 -0.367 -1.494 H13 GT3 34 GT3 H14 H14 H 0 1 N N N -9.471 -5.595 -3.972 -2.284 -1.795 1.247 H14 GT3 35 GT3 H15 H15 H 0 1 N N N -9.945 -4.263 -2.864 -3.926 -1.777 1.934 H15 GT3 36 GT3 H16 H16 H 0 1 N N N -11.748 -5.064 -4.130 -3.774 -3.211 0.029 H16 GT3 37 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GT3 N2 C2 SING N N 1 GT3 "O1'" "C1'" SING N N 2 GT3 "C1'" "C2'" SING N N 3 GT3 C2 N3 DOUB N N 4 GT3 C2 N1 SING N N 5 GT3 N3 C4 SING N N 6 GT3 N1 C6 SING N N 7 GT3 "N2'" "C2'" SING N N 8 GT3 "N2'" C2A SING N N 9 GT3 "C2'" "C3'" SING N N 10 GT3 C4 N9 SING Y N 11 GT3 C4 C5 DOUB Y N 12 GT3 C2B C2A SING N N 13 GT3 C2B N9 SING N N 14 GT3 C2A O2A DOUB N N 15 GT3 C6 C5 SING N N 16 GT3 C6 O6 DOUB N N 17 GT3 N9 C8 SING Y N 18 GT3 C5 N7 SING Y N 19 GT3 "C3'" "O3'" SING N N 20 GT3 "C3'" C3A SING N N 21 GT3 C8 N7 DOUB Y N 22 GT3 N1 H1 SING N N 23 GT3 N2 H2 SING N N 24 GT3 N2 H3 SING N N 25 GT3 C8 H4 SING N N 26 GT3 C2B H5 SING N N 27 GT3 C2B H6 SING N N 28 GT3 "N2'" H7 SING N N 29 GT3 "C2'" H8 SING N N 30 GT3 "C3'" H9 SING N N 31 GT3 C3A H10 SING N N 32 GT3 C3A H11 SING N N 33 GT3 C3A H12 SING N N 34 GT3 "O3'" H13 SING N N 35 GT3 "C1'" H14 SING N N 36 GT3 "C1'" H15 SING N N 37 GT3 "O1'" H16 SING N N 38 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GT3 InChI InChI 1.03 "InChI=1S/C11H16N6O4/c1-5(19)6(3-18)14-7(20)2-17-4-13-8-9(17)15-11(12)16-10(8)21/h4-6,18-19H,2-3H2,1H3,(H,14,20)(H3,12,15,16,21)/t5-,6-/m1/s1" GT3 InChIKey InChI 1.03 ASZZNRVPFUUWEN-PHDIDXHHSA-N GT3 SMILES_CANONICAL CACTVS 3.385 "C[C@@H](O)[C@@H](CO)NC(=O)Cn1cnc2C(=O)NC(=Nc12)N" GT3 SMILES CACTVS 3.385 "C[CH](O)[CH](CO)NC(=O)Cn1cnc2C(=O)NC(=Nc12)N" GT3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]([C@@H](CO)NC(=O)Cn1cnc2c1N=C(NC2=O)N)O" GT3 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C(CO)NC(=O)Cn1cnc2c1N=C(NC2=O)N)O" # _pdbx_chem_comp_identifier.comp_id GT3 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-~{N}-[(2~{R},3~{R})-1,3-bis(oxidanyl)butan-2-yl]ethanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GT3 "Create component" 2020-04-03 PDBJ GT3 "Initial release" 2020-11-25 RCSB ##