data_GTR # _chem_comp.id GTR _chem_comp.name "beta-D-galactopyranuronic acid" _chem_comp.type "D-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H10 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "beta-D-galacturonic acid; D-galacturonic acid; galacturonic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2001-11-15 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 194.139 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GTR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1KCC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 GTR "beta-D-galacturonic acid" PDB ? 2 GTR "D-galacturonic acid" PDB ? 3 GTR "galacturonic acid" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GTR C1 C1 C 0 1 N N R 17.771 46.226 -4.721 1.106 1.303 -0.342 C1 GTR 1 GTR C2 C2 C 0 1 N N R 18.574 46.641 -5.943 1.793 0.027 0.152 C2 GTR 2 GTR C3 C3 C 0 1 N N S 19.030 45.471 -6.656 1.096 -1.189 -0.464 C3 GTR 3 GTR C4 C4 C 0 1 N N R 19.890 44.533 -5.756 -0.392 -1.151 -0.101 C4 GTR 4 GTR C5 C5 C 0 1 N N S 19.018 44.243 -4.519 -0.994 0.171 -0.585 C5 GTR 5 GTR C6 C6 C 0 1 N N N 19.792 43.426 -3.504 -2.443 0.242 -0.179 C6 GTR 6 GTR O1 O1 O 0 1 N Y N 17.334 47.338 -4.000 1.715 2.441 0.272 O1 GTR 7 GTR O2 O2 O 0 1 N N N 17.743 47.469 -6.782 3.166 0.041 -0.241 O2 GTR 8 GTR O3 O3 O 0 1 N N N 19.865 45.897 -7.815 1.682 -2.387 0.049 O3 GTR 9 GTR O4 O4 O 0 1 N N N 21.126 45.178 -5.414 -0.539 -1.251 1.317 O4 GTR 10 GTR O5 O5 O 0 1 N N N 18.600 45.458 -3.858 -0.280 1.261 0.002 O5 GTR 11 GTR O6A O61 O 0 1 N N N 20.156 43.888 -2.401 -2.809 1.081 0.610 O6A GTR 12 GTR O6B O62 O 0 1 N N N 20.015 42.260 -3.851 -3.328 -0.627 -0.693 O6B GTR 13 GTR H1 H1 H 0 1 N N N 16.913 45.623 -5.052 1.211 1.376 -1.425 H1 GTR 14 GTR H2 H2 H 0 1 N N N 19.444 47.223 -5.604 1.724 -0.025 1.239 H2 GTR 15 GTR H3 H3 H 0 1 N N N 18.166 44.899 -7.025 1.207 -1.163 -1.548 H3 GTR 16 GTR H4 H4 H 0 1 N N N 20.078 43.593 -6.295 -0.906 -1.983 -0.581 H4 GTR 17 GTR H5 H5 H 0 1 N N N 18.136 43.670 -4.839 -0.917 0.228 -1.671 H5 GTR 18 GTR HO1 HO1 H 0 1 N Y N 16.836 47.050 -3.244 1.330 3.286 0.005 HO1 GTR 19 GTR HO2 HO2 H 0 1 N Y N 18.234 47.735 -7.550 3.669 0.789 0.110 HO2 GTR 20 GTR HO3 HO3 H 0 1 N Y N 20.167 45.130 -8.287 2.627 -2.474 -0.140 HO3 GTR 21 GTR HO4 HO4 H 0 1 N Y N 21.644 44.600 -4.866 -1.458 -1.233 1.620 HO4 GTR 22 GTR HO6B HO6 H 0 0 N N N 20.487 41.809 -3.161 -4.246 -0.542 -0.402 HO6B GTR 23 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GTR C1 C2 SING N N 1 GTR C1 O1 SING N N 2 GTR C1 O5 SING N N 3 GTR C1 H1 SING N N 4 GTR C2 C3 SING N N 5 GTR C2 O2 SING N N 6 GTR C2 H2 SING N N 7 GTR C3 C4 SING N N 8 GTR C3 O3 SING N N 9 GTR C3 H3 SING N N 10 GTR C4 C5 SING N N 11 GTR C4 O4 SING N N 12 GTR C4 H4 SING N N 13 GTR C5 C6 SING N N 14 GTR C5 O5 SING N N 15 GTR C5 H5 SING N N 16 GTR C6 O6A DOUB N N 17 GTR C6 O6B SING N N 18 GTR O1 HO1 SING N N 19 GTR O2 HO2 SING N N 20 GTR O3 HO3 SING N N 21 GTR O4 HO4 SING N N 22 GTR O6B HO6B SING N N 23 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GTR SMILES ACDLabs 12.01 "C1(C(C(C(C(C(=O)O)O1)O)O)O)O" GTR InChI InChI 1.03 "InChI=1S/C6H10O7/c7-1-2(8)4(5(10)11)13-6(12)3(1)9/h1-4,6-9,12H,(H,10,11)/t1-,2+,3+,4-,6+/m0/s1" GTR InChIKey InChI 1.03 AEMOLEFTQBMNLQ-DTEWXJGMSA-N GTR SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1O[C@@H]([C@H](O)[C@H](O)[C@H]1O)C(O)=O" GTR SMILES CACTVS 3.385 "O[CH]1O[CH]([CH](O)[CH](O)[CH]1O)C(O)=O" GTR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[C@@H]1([C@H]([C@H](O[C@H]([C@@H]1O)O)C(=O)O)O)O" GTR SMILES "OpenEye OEToolkits" 1.7.6 "C1(C(C(OC(C1O)O)C(=O)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GTR "SYSTEMATIC NAME" ACDLabs 12.01 "beta-D-galactopyranuronic acid" GTR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,3R,4S,5R,6R)-3,4,5,6-tetrakis(oxidanyl)oxane-2-carboxylic acid" GTR "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 DGalpAb GTR "COMMON NAME" GMML 1.0 "b-D-galactopyranuronic acid" GTR "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-D-GalpA GTR "SNFG CARBOHYDRATE SYMBOL" GMML 1.0 GalA # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support GTR "CARBOHYDRATE ISOMER" D PDB ? GTR "CARBOHYDRATE RING" pyranose PDB ? GTR "CARBOHYDRATE ANOMER" beta PDB ? GTR "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GTR "Create component" 2001-11-15 RCSB GTR "Modify descriptor" 2011-06-04 RCSB GTR "Modify descriptor" 2012-01-05 RCSB GTR "Modify coordinates" 2012-01-05 RCSB GTR "Modify name" 2015-10-06 PDBJ GTR "Other modification" 2019-08-12 RCSB GTR "Other modification" 2019-12-19 RCSB GTR "Other modification" 2020-07-03 RCSB GTR "Modify name" 2020-07-17 RCSB GTR "Modify synonyms" 2020-07-17 RCSB GTR "Modify atom id" 2020-07-17 RCSB GTR "Modify component atom id" 2020-07-17 RCSB ##