data_GU1 # _chem_comp.id GU1 _chem_comp.name "2,3-di-O-methyl-beta-D-glucopyranuronic acid" _chem_comp.type "D-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C8 H14 O7" _chem_comp.mon_nstd_parent_comp_id BDP _chem_comp.pdbx_synonyms "2,3-di-O-methyl-beta-D-glucuronic acid; 2,3-di-O-methyl-D-glucuronic acid; 2,3-di-O-methyl-glucuronic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-06-22 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 222.193 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GU1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1TB6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 GU1 "2,3-di-O-methyl-beta-D-glucuronic acid" PDB ? 2 GU1 "2,3-di-O-methyl-D-glucuronic acid" PDB ? 3 GU1 "2,3-di-O-methyl-glucuronic acid" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GU1 O1 O1 O 0 1 N Y N 56.916 -2.433 -12.695 -1.487 2.681 0.147 O1 GU1 1 GU1 C1 C1 C 0 1 N N R 57.097 -2.547 -11.275 -0.811 1.475 0.508 C1 GU1 2 GU1 C2 C2 C 0 1 N N R 57.822 -1.293 -10.814 -1.497 0.284 -0.166 C2 GU1 3 GU1 O2 O2 O 0 1 N N N 59.121 -1.280 -11.426 -2.841 0.177 0.305 O2 GU1 4 GU1 C7 C7 C 0 1 N N N 59.434 0.025 -11.921 -3.789 0.912 -0.472 C7 GU1 5 GU1 C3 C3 C 0 1 N N S 57.931 -1.318 -9.295 -0.730 -0.997 0.178 C3 GU1 6 GU1 O3 O3 O 0 1 N N N 58.689 -0.202 -8.791 -1.319 -2.105 -0.507 O3 GU1 7 GU1 C8 C8 C 0 1 N N N 58.199 1.081 -9.198 -1.192 -3.350 0.184 C8 GU1 8 GU1 O5 O5 O 0 1 N N N 55.820 -2.677 -10.627 0.550 1.545 0.080 O5 GU1 9 GU1 C5 C5 C 0 1 N N S 55.904 -2.702 -9.191 1.328 0.394 0.416 C5 GU1 10 GU1 C6 C6 C 0 1 N N N 54.496 -2.847 -8.609 2.745 0.590 -0.057 C6 GU1 11 GU1 O6B O38 O 0 1 N N N 54.327 -3.451 -7.547 3.683 -0.324 0.239 O6B GU1 12 GU1 O6A O37 O 0 1 N N N 53.532 -2.364 -9.196 3.037 1.568 -0.703 O6A GU1 13 GU1 C4 C4 C 0 1 N N S 56.546 -1.424 -8.669 0.728 -0.840 -0.262 C4 GU1 14 GU1 O4 O4 O 0 1 N N N 56.594 -1.436 -7.232 1.470 -2.001 0.119 O4 GU1 15 GU1 HO1 HO1 H 0 1 N Y N 56.464 -3.203 -13.020 -1.107 3.478 0.539 HO1 GU1 16 GU1 H1 H1 H 0 1 N N N 57.686 -3.440 -11.017 -0.846 1.350 1.590 H1 GU1 17 GU1 H2 H2 H 0 1 N N N 57.277 -0.384 -11.107 -1.499 0.429 -1.246 H2 GU1 18 GU1 H71 H71 H 0 1 N N N 60.431 0.012 -12.385 -4.786 0.779 -0.050 H71 GU1 19 GU1 H72 H72 H 0 1 N N N 58.685 0.322 -12.670 -3.527 1.970 -0.459 H72 GU1 20 GU1 H73 H73 H 0 1 N N N 59.426 0.744 -11.089 -3.778 0.547 -1.499 H73 GU1 21 GU1 H3 H3 H 0 1 N N N 58.496 -2.215 -9.001 -0.772 -1.169 1.253 H3 GU1 22 GU1 H81 H81 H 0 1 N N N 58.835 1.870 -8.769 -0.136 -3.582 0.322 H81 GU1 23 GU1 H82 H82 H 0 1 N N N 58.220 1.150 -10.296 -1.678 -3.277 1.157 H82 GU1 24 GU1 H83 H83 H 0 1 N N N 57.166 1.209 -8.842 -1.664 -4.139 -0.400 H83 GU1 25 GU1 H5 H5 H 0 1 N N N 56.527 -3.555 -8.883 1.321 0.255 1.497 H5 GU1 26 GU1 HO6B H38 H 0 0 N N N 53.403 -3.451 -7.326 4.578 -0.155 -0.086 HO6B GU1 27 GU1 H4 H4 H 0 1 N N N 55.954 -0.540 -8.948 0.772 -0.719 -1.344 H4 GU1 28 GU1 HO4 HO4 H 0 1 N Y N 55.712 -1.503 -6.886 2.404 -1.970 -0.128 HO4 GU1 29 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GU1 O1 C1 SING N N 1 GU1 O1 HO1 SING N N 2 GU1 C1 C2 SING N N 3 GU1 C1 O5 SING N N 4 GU1 C1 H1 SING N N 5 GU1 C2 O2 SING N N 6 GU1 C2 C3 SING N N 7 GU1 C2 H2 SING N N 8 GU1 O2 C7 SING N N 9 GU1 C7 H71 SING N N 10 GU1 C7 H72 SING N N 11 GU1 C7 H73 SING N N 12 GU1 C3 O3 SING N N 13 GU1 C3 C4 SING N N 14 GU1 C3 H3 SING N N 15 GU1 O3 C8 SING N N 16 GU1 C8 H81 SING N N 17 GU1 C8 H82 SING N N 18 GU1 C8 H83 SING N N 19 GU1 O5 C5 SING N N 20 GU1 C5 C6 SING N N 21 GU1 C5 C4 SING N N 22 GU1 C5 H5 SING N N 23 GU1 C6 O6B SING N N 24 GU1 C6 O6A DOUB N N 25 GU1 O6B HO6B SING N N 26 GU1 C4 O4 SING N N 27 GU1 C4 H4 SING N N 28 GU1 O4 HO4 SING N N 29 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GU1 SMILES ACDLabs 11.02 "O=C(O)C1OC(O)C(OC)C(OC)C1O" GU1 SMILES_CANONICAL CACTVS 3.352 "CO[C@H]1[C@H](O)O[C@@H]([C@@H](O)[C@@H]1OC)C(O)=O" GU1 SMILES CACTVS 3.352 "CO[CH]1[CH](O)O[CH]([CH](O)[CH]1OC)C(O)=O" GU1 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CO[C@H]1[C@@H]([C@H](O[C@H]([C@@H]1OC)O)C(=O)O)O" GU1 SMILES "OpenEye OEToolkits" 1.7.0 "COC1C(C(OC(C1OC)O)C(=O)O)O" GU1 InChI InChI 1.03 "InChI=1S/C8H14O7/c1-13-4-3(9)5(7(10)11)15-8(12)6(4)14-2/h3-6,8-9,12H,1-2H3,(H,10,11)/t3-,4-,5-,6+,8+/m0/s1" GU1 InChIKey InChI 1.03 YEGNNGDFCAGXPA-GRJZWZNASA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GU1 "SYSTEMATIC NAME" ACDLabs 11.02 "2,3-di-O-methyl-beta-D-glucopyranuronic acid" GU1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2S,3S,4S,5R,6R)-3,6-dihydroxy-4,5-dimethoxy-oxane-2-carboxylic acid" GU1 "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-D-GlcpAOMe3OMe # _pdbx_chem_comp_related.comp_id GU1 _pdbx_chem_comp_related.related_comp_id BDP _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 GU1 C1 BDP C1 "Carbohydrate core" 2 GU1 C2 BDP C2 "Carbohydrate core" 3 GU1 C3 BDP C3 "Carbohydrate core" 4 GU1 C4 BDP C4 "Carbohydrate core" 5 GU1 C5 BDP C5 "Carbohydrate core" 6 GU1 C6 BDP C6 "Carbohydrate core" 7 GU1 O1 BDP O1 "Carbohydrate core" 8 GU1 O2 BDP O2 "Carbohydrate core" 9 GU1 O3 BDP O3 "Carbohydrate core" 10 GU1 O6A BDP O6A "Carbohydrate core" 11 GU1 O6B BDP O6B "Carbohydrate core" 12 GU1 O4 BDP O4 "Carbohydrate core" 13 GU1 O5 BDP O5 "Carbohydrate core" 14 GU1 H1 BDP H1 "Carbohydrate core" 15 GU1 H2 BDP H2 "Carbohydrate core" 16 GU1 H3 BDP H3 "Carbohydrate core" 17 GU1 HO6B BDP HO6B "Carbohydrate core" 18 GU1 H4 BDP H4 "Carbohydrate core" 19 GU1 H5 BDP H5 "Carbohydrate core" 20 GU1 HO1 BDP HO1 "Carbohydrate core" 21 GU1 HO4 BDP HO4 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support GU1 "CARBOHYDRATE ISOMER" D PDB ? GU1 "CARBOHYDRATE RING" pyranose PDB ? GU1 "CARBOHYDRATE ANOMER" beta PDB ? GU1 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GU1 "Create component" 2004-06-22 RCSB GU1 "Modify descriptor" 2011-06-04 RCSB GU1 "Other modification" 2020-07-03 RCSB GU1 "Modify parent residue" 2020-07-17 RCSB GU1 "Modify name" 2020-07-17 RCSB GU1 "Modify synonyms" 2020-07-17 RCSB GU1 "Modify linking type" 2020-07-17 RCSB GU1 "Modify atom id" 2020-07-17 RCSB GU1 "Modify component atom id" 2020-07-17 RCSB GU1 "Modify leaving atom flag" 2020-07-17 RCSB ##