data_GU3 # _chem_comp.id GU3 _chem_comp.name "methyl 3-O-methyl-2,6-di-O-sulfo-alpha-D-glucopyranoside" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C8 H16 O12 S2" _chem_comp.mon_nstd_parent_comp_id GLC _chem_comp.pdbx_synonyms ;methyl 3-O-methyl-2,6-di-O-sulfo-alpha-D-glucoside; methyl 3-O-methyl-2,6-di-O-sulfo-D-glucoside; methyl 3-O-methyl-2,6-di-O-sulfo-glucoside ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-06-22 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 368.335 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GU3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1TB6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 GU3 "methyl 3-O-methyl-2,6-di-O-sulfo-alpha-D-glucoside" PDB ? 2 GU3 "methyl 3-O-methyl-2,6-di-O-sulfo-D-glucoside" PDB ? 3 GU3 "methyl 3-O-methyl-2,6-di-O-sulfo-glucoside" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GU3 O4 O4 O 0 1 N N N 58.535 -2.222 -21.198 0.699 2.832 -0.363 O4 GU3 1 GU3 O50 O50 O 0 1 N N N 53.751 -3.478 -24.268 5.452 -1.331 -0.498 O50 GU3 2 GU3 S6 S6 S 0 1 N N N 54.279 -3.511 -22.865 4.719 -0.378 0.259 S6 GU3 3 GU3 O51 O51 O 0 1 N N N 53.157 -3.231 -21.909 4.710 -0.883 1.694 O51 GU3 4 GU3 O52 O52 O 0 1 N N N 54.854 -4.866 -22.578 5.066 0.999 0.320 O52 GU3 5 GU3 O6 O6 O 0 1 N N N 55.293 -2.511 -22.713 3.285 -0.437 -0.249 O6 GU3 6 GU3 C6 C6 C 0 1 N N N 56.571 -2.654 -23.338 2.442 0.594 0.269 C6 GU3 7 GU3 C5 C5 C 0 1 N N R 57.409 -1.384 -23.172 1.033 0.437 -0.306 C5 GU3 8 GU3 O5 O5 O 0 1 N N N 56.655 -0.284 -23.709 0.462 -0.787 0.161 O5 GU3 9 GU3 C1 C1 C 0 1 N N S 57.355 0.970 -23.637 -0.851 -1.046 -0.339 C1 GU3 10 GU3 O1 O1 O 0 1 N N N 58.568 0.945 -24.404 -0.817 -1.089 -1.767 O1 GU3 11 GU3 C8 C8 C 0 1 N N N 58.264 0.896 -25.801 -0.143 -2.232 -2.298 C8 GU3 12 GU3 C2 C2 C 0 1 N N R 57.678 1.298 -22.178 -1.798 0.068 0.115 C2 GU3 13 GU3 O2 O2 O 0 1 N N N 58.405 2.529 -22.123 -3.099 -0.158 -0.431 O2 GU3 14 GU3 S2 S2 S 0 1 N N N 57.553 3.617 -21.750 -4.043 -0.900 0.503 S2 GU3 15 GU3 O54 O54 O 0 1 N N N 57.156 3.467 -20.311 -5.200 -1.213 -0.260 O54 GU3 16 GU3 O55 O55 O 0 1 N N N 56.329 3.624 -22.617 -3.260 -1.883 1.166 O55 GU3 17 GU3 O53 O53 O 0 1 N N N 58.280 4.918 -21.924 -4.487 0.088 1.572 O53 GU3 18 GU3 C3 C3 C 0 1 N N S 58.516 0.170 -21.570 -1.262 1.416 -0.379 C3 GU3 19 GU3 O3 O3 O 0 1 N N N 58.742 0.484 -20.188 -2.099 2.469 0.103 O3 GU3 20 GU3 C7 C7 C 0 1 N N N 59.912 -0.180 -19.701 -2.155 3.607 -0.758 C7 GU3 21 GU3 C4 C4 C 0 1 N N R 57.744 -1.137 -21.707 0.162 1.611 0.150 C4 GU3 22 GU3 HO4 HO4 H 0 1 N Y N 58.710 -2.842 -21.896 1.602 3.017 -0.072 HO4 GU3 23 GU3 H61 H6 H 0 1 N N N 57.104 -3.497 -22.873 2.402 0.520 1.355 H61 GU3 24 GU3 H62 H6A H 0 1 N N N 56.418 -2.836 -24.412 2.844 1.568 -0.014 H62 GU3 25 GU3 H5 H5 H 0 1 N N N 58.363 -1.493 -23.709 1.084 0.424 -1.394 H5 GU3 26 GU3 H1 H1 H 0 1 N N N 56.701 1.746 -24.061 -1.205 -2.003 0.045 H1 GU3 27 GU3 H8 H8 H 0 1 N N N 57.173 0.883 -25.939 0.890 -2.237 -1.952 H8 GU3 28 GU3 H8A H8A H 0 1 N N N 58.686 1.781 -26.299 -0.644 -3.139 -1.961 H8A GU3 29 GU3 H8B H8B H 0 1 N N N 58.699 -0.014 -26.239 -0.161 -2.191 -3.387 H8B GU3 30 GU3 H2 H2 H 0 1 N N N 56.744 1.398 -21.605 -1.856 0.075 1.204 H2 GU3 31 GU3 H3 H3 H 0 1 N N N 59.483 0.064 -22.084 -1.253 1.427 -1.468 H3 GU3 32 GU3 H7 H7 H 0 1 N N N 60.611 -0.350 -20.533 -1.154 4.022 -0.878 H7 GU3 33 GU3 H7A H7A H 0 1 N N N 60.397 0.446 -18.937 -2.543 3.308 -1.732 H7A GU3 34 GU3 H7B H7B H 0 1 N N N 59.627 -1.146 -19.258 -2.811 4.361 -0.322 H7B GU3 35 GU3 H4 H4 H 0 1 N N N 56.810 -1.070 -21.130 0.145 1.651 1.240 H4 GU3 36 GU3 H15 H15 H 0 1 N N N 53.501 -3.172 -21.025 5.581 -0.887 2.115 H15 GU3 37 GU3 H16 H16 H 0 1 N N N 58.434 5.312 -21.073 -5.096 -0.285 2.224 H16 GU3 38 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GU3 O4 C4 SING N N 1 GU3 O4 HO4 SING N N 2 GU3 O50 S6 DOUB N N 3 GU3 S6 O51 SING N N 4 GU3 S6 O52 DOUB N N 5 GU3 S6 O6 SING N N 6 GU3 O6 C6 SING N N 7 GU3 C6 C5 SING N N 8 GU3 C6 H61 SING N N 9 GU3 C6 H62 SING N N 10 GU3 C5 O5 SING N N 11 GU3 C5 C4 SING N N 12 GU3 C5 H5 SING N N 13 GU3 O5 C1 SING N N 14 GU3 C1 O1 SING N N 15 GU3 C1 C2 SING N N 16 GU3 C1 H1 SING N N 17 GU3 O1 C8 SING N N 18 GU3 C8 H8 SING N N 19 GU3 C8 H8A SING N N 20 GU3 C8 H8B SING N N 21 GU3 C2 O2 SING N N 22 GU3 C2 C3 SING N N 23 GU3 C2 H2 SING N N 24 GU3 O2 S2 SING N N 25 GU3 S2 O54 DOUB N N 26 GU3 S2 O55 DOUB N N 27 GU3 S2 O53 SING N N 28 GU3 C3 O3 SING N N 29 GU3 C3 C4 SING N N 30 GU3 C3 H3 SING N N 31 GU3 O3 C7 SING N N 32 GU3 C7 H7 SING N N 33 GU3 C7 H7A SING N N 34 GU3 C7 H7B SING N N 35 GU3 C4 H4 SING N N 36 GU3 O51 H15 SING N N 37 GU3 O53 H16 SING N N 38 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GU3 SMILES ACDLabs 10.04 "O=S(=O)(O)OCC1OC(OC)C(OS(=O)(=O)O)C(OC)C1O" GU3 SMILES_CANONICAL CACTVS 3.341 "CO[C@H]1O[C@H](CO[S](O)(=O)=O)[C@@H](O)[C@H](OC)[C@H]1O[S](O)(=O)=O" GU3 SMILES CACTVS 3.341 "CO[CH]1O[CH](CO[S](O)(=O)=O)[CH](O)[CH](OC)[CH]1O[S](O)(=O)=O" GU3 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CO[C@H]1[C@@H]([C@H](O[C@@H]([C@@H]1OS(=O)(=O)O)OC)COS(=O)(=O)O)O" GU3 SMILES "OpenEye OEToolkits" 1.5.0 "COC1C(C(OC(C1OS(=O)(=O)O)OC)COS(=O)(=O)O)O" GU3 InChI InChI 1.03 "InChI=1S/C8H16O12S2/c1-16-6-5(9)4(3-18-21(10,11)12)19-8(17-2)7(6)20-22(13,14)15/h4-9H,3H2,1-2H3,(H,10,11,12)(H,13,14,15)/t4-,5-,6+,7-,8+/m1/s1" GU3 InChIKey InChI 1.03 GFHCIIGKYHICQU-CBQIKETKSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GU3 "SYSTEMATIC NAME" ACDLabs 10.04 "methyl 3-O-methyl-2,6-di-O-sulfo-alpha-D-glucopyranoside" GU3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3R,4S,5R,6S)-3-hydroxy-4,6-dimethoxy-5-sulfooxy-oxan-2-yl]methyl hydrogen sulfate" GU3 "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 "DGlcp[1Me,2S,3Me,6S]a" GU3 "COMMON NAME" GMML 1.0 1-methyl-2-sulfo-3-methyl-6-sulfo-a-D-glucopyranose GU3 "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 "methyl 3-o-methyl-2,6-di-o-sulfonato-a-D-glucopyranoside" # _pdbx_chem_comp_related.comp_id GU3 _pdbx_chem_comp_related.related_comp_id GLC _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 GU3 C1 GLC C1 "Carbohydrate core" 2 GU3 C2 GLC C2 "Carbohydrate core" 3 GU3 C3 GLC C3 "Carbohydrate core" 4 GU3 C4 GLC C4 "Carbohydrate core" 5 GU3 C5 GLC C5 "Carbohydrate core" 6 GU3 C6 GLC C6 "Carbohydrate core" 7 GU3 O1 GLC O1 "Carbohydrate core" 8 GU3 O2 GLC O2 "Carbohydrate core" 9 GU3 O3 GLC O3 "Carbohydrate core" 10 GU3 O4 GLC O4 "Carbohydrate core" 11 GU3 O5 GLC O5 "Carbohydrate core" 12 GU3 O6 GLC O6 "Carbohydrate core" 13 GU3 H1 GLC H1 "Carbohydrate core" 14 GU3 H2 GLC H2 "Carbohydrate core" 15 GU3 H3 GLC H3 "Carbohydrate core" 16 GU3 H4 GLC H4 "Carbohydrate core" 17 GU3 H5 GLC H5 "Carbohydrate core" 18 GU3 H61 GLC H61 "Carbohydrate core" 19 GU3 H62 GLC H62 "Carbohydrate core" 20 GU3 HO4 GLC HO4 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support GU3 "CARBOHYDRATE ISOMER" D PDB ? GU3 "CARBOHYDRATE RING" pyranose PDB ? GU3 "CARBOHYDRATE ANOMER" alpha PDB ? GU3 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GU3 "Create component" 2004-06-22 RCSB GU3 "Modify descriptor" 2011-06-04 RCSB GU3 "Other modification" 2020-07-03 RCSB GU3 "Modify parent residue" 2020-07-17 RCSB GU3 "Modify synonyms" 2020-07-17 RCSB GU3 "Modify atom id" 2020-07-17 RCSB GU3 "Modify component atom id" 2020-07-17 RCSB GU3 "Modify leaving atom flag" 2020-07-17 RCSB ##