data_GU5 # _chem_comp.id GU5 _chem_comp.name "2,3-di-O-methyl-6-O-sulfonato-alpha-D-glucopyranose" _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C8 H15 O9 S" _chem_comp.mon_nstd_parent_comp_id GLC _chem_comp.pdbx_synonyms ;2,3-di-O-methyl-6-O-sulfonato-alpha-D-glucose; 2,3-di-O-methyl-6-O-sulfonato-D-glucose; 2,3-di-O-methyl-6-O-sulfonato-glucose ; _chem_comp.pdbx_formal_charge -1 _chem_comp.pdbx_initial_date 2004-06-22 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 287.264 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GU5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1TB6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 GU5 "2,3-di-O-methyl-6-O-sulfonato-alpha-D-glucose" PDB ? 2 GU5 "2,3-di-O-methyl-6-O-sulfonato-D-glucose" PDB ? 3 GU5 "2,3-di-O-methyl-6-O-sulfonato-glucose" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GU5 O1 O1 O 0 1 N Y N 53.132 -7.697 27.932 -3.753 1.372 -3.369 O1 GU5 1 GU5 C1 C1 C 0 1 N N S 53.529 -8.761 28.811 -2.975 1.013 -2.228 C1 GU5 2 GU5 C2 C2 C 0 1 N N R 52.307 -9.306 29.537 -1.923 2.100 -1.998 C2 GU5 3 GU5 O2 O2 O 0 1 N N N 51.413 -10.089 28.726 -1.147 2.274 -3.184 O2 GU5 4 GU5 C7 C7 C 0 1 N N N 50.801 -9.360 27.658 -0.190 3.313 -3.032 C7 GU5 5 GU5 C3 C3 C 0 1 N N S 51.643 -8.137 30.255 -0.999 1.740 -0.832 C3 GU5 6 GU5 O3 O3 O 0 1 N N N 50.403 -8.534 30.867 -1.722 1.906 0.384 O3 GU5 7 GU5 C8 C8 C 0 1 N N N 50.536 -9.591 31.824 -0.900 1.646 1.509 C8 GU5 8 GU5 O5 O5 O 0 1 N N N 54.451 -8.270 29.798 -2.351 -0.253 -2.431 O5 GU5 9 GU5 C5 C5 C 0 1 N N R 53.925 -7.165 30.556 -1.558 -0.718 -1.331 C5 GU5 10 GU5 C6 C6 C 0 1 N N N 54.951 -6.827 31.639 -2.439 -1.157 -0.163 C6 GU5 11 GU5 O6 O6 O 0 1 N N N 55.171 -7.977 32.460 -1.617 -1.764 0.817 O6 GU5 12 GU5 S6 S6 S 0 1 N N N 56.045 -7.922 33.590 -2.287 -2.342 2.202 S6 GU5 13 GU5 O32 O32 O 0 1 N N N 56.220 -9.305 34.145 -3.232 -3.354 1.732 O32 GU5 14 GU5 O33 O33 O 0 1 N N N 55.456 -7.028 34.641 -2.919 -1.174 2.815 O33 GU5 15 GU5 O31 O31 O -1 1 N N N 57.381 -7.391 33.162 -1.157 -2.884 2.955 O31 GU5 16 GU5 C4 C4 C 0 1 N N R 52.612 -7.506 31.249 -0.475 0.302 -0.940 C4 GU5 17 GU5 O4 O4 O 0 1 N N N ? ? ? 0.541 0.287 -1.947 O4 GU5 18 GU5 HO1 HO1 H 0 1 N Y N 53.894 -7.356 27.478 -3.654 0.650 -4.008 HO1 GU5 19 GU5 H1 H1 H 0 1 N N N 54.012 -9.560 28.202 -3.663 0.946 -1.379 H1 GU5 20 GU5 H2 H2 H 0 1 N N N 52.639 -10.065 30.282 -2.428 3.054 -1.810 H2 GU5 21 GU5 H71 H71 H 0 1 N N N 50.108 -9.966 27.029 0.805 2.878 -2.909 H71 GU5 22 GU5 H72 H72 H 0 1 N N N 50.280 -8.455 28.050 -0.445 3.919 -2.159 H72 GU5 23 GU5 H73 H73 H 0 1 N N N 51.577 -8.871 27.023 -0.203 3.942 -3.925 H73 GU5 24 GU5 H3 H3 H 0 1 N N N 51.383 -7.356 29.502 -0.152 2.436 -0.813 H3 GU5 25 GU5 H81 H81 H 0 1 N N N 49.575 -9.898 32.298 0.086 2.090 1.352 H81 GU5 26 GU5 H82 H82 H 0 1 N N N 51.045 -10.470 31.366 -0.806 0.566 1.652 H82 GU5 27 GU5 H83 H83 H 0 1 N N N 51.287 -9.321 32.602 -1.359 2.090 2.396 H83 GU5 28 GU5 H5 H5 H 0 1 N N N 53.733 -6.318 29.856 -1.058 -1.621 -1.702 H5 GU5 29 GU5 H61 H61 H 0 1 N N N 55.899 -6.426 31.211 -3.181 -1.877 -0.507 H61 GU5 30 GU5 H62 H62 H 0 1 N N N 54.655 -5.932 32.235 -2.939 -0.292 0.271 H62 GU5 31 GU5 H4 H4 H 0 1 N N N 53.015 -7.462 32.287 -0.001 -0.005 -0.002 H4 GU5 32 GU5 HO4 HO4 H 0 1 N Y N 0.603 0.393 0.619 1.167 -0.410 -1.697 HO4 GU5 33 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GU5 O1 C1 SING N N 1 GU5 O1 HO1 SING N N 2 GU5 C1 C2 SING N N 3 GU5 C1 O5 SING N N 4 GU5 C1 H1 SING N N 5 GU5 C2 O2 SING N N 6 GU5 C2 C3 SING N N 7 GU5 C2 H2 SING N N 8 GU5 O2 C7 SING N N 9 GU5 C7 H71 SING N N 10 GU5 C7 H72 SING N N 11 GU5 C7 H73 SING N N 12 GU5 C3 O3 SING N N 13 GU5 C3 C4 SING N N 14 GU5 C3 H3 SING N N 15 GU5 O3 C8 SING N N 16 GU5 C8 H81 SING N N 17 GU5 C8 H82 SING N N 18 GU5 C8 H83 SING N N 19 GU5 O5 C5 SING N N 20 GU5 C5 C6 SING N N 21 GU5 C5 C4 SING N N 22 GU5 C5 H5 SING N N 23 GU5 C6 O6 SING N N 24 GU5 C6 H61 SING N N 25 GU5 C6 H62 SING N N 26 GU5 O6 S6 SING N N 27 GU5 S6 O32 DOUB N N 28 GU5 S6 O33 DOUB N N 29 GU5 S6 O31 SING N N 30 GU5 C4 O4 SING N N 31 GU5 C4 H4 SING N N 32 GU5 O4 HO4 SING N N 33 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GU5 SMILES ACDLabs 10.04 "[O-]S(=O)(=O)OCC1OC(O)C(OC)C(OC)C1O" GU5 SMILES_CANONICAL CACTVS 3.341 "CO[C@H]1[C@@H](O)O[C@H](CO[S]([O-])(=O)=O)[C@@H](O)[C@@H]1OC" GU5 SMILES CACTVS 3.341 "CO[CH]1[CH](O)O[CH](CO[S]([O-])(=O)=O)[CH](O)[CH]1OC" GU5 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CO[C@H]1[C@@H]([C@H](O[C@@H]([C@@H]1OC)O)COS(=O)(=O)[O-])O" GU5 SMILES "OpenEye OEToolkits" 1.5.0 "COC1C(C(OC(C1OC)O)COS(=O)(=O)[O-])O" GU5 InChI InChI 1.03 "InChI=1S/C8H16O9S/c1-14-6-5(9)4(3-16-18(11,12)13)17-8(10)7(6)15-2/h4-10H,3H2,1-2H3,(H,11,12,13)/p-1/t4-,5?,6+,7-,8+/m1/s1" GU5 InChIKey InChI 1.03 SYRNRUURZIIPLL-IINKRSELSA-M # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GU5 "SYSTEMATIC NAME" ACDLabs 10.04 "2,3-di-O-methyl-6-O-sulfonato-alpha-D-glucopyranose" GU5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3R,4S,5R,6S)-3,6-dihydroxy-4,5-dimethoxy-oxan-2-yl]methyl sulfate" GU5 "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 "DGlcp[2Me,3Me,6S]a" GU5 "COMMON NAME" GMML 1.0 2-methyl-3-methyl-6-sulfo-a-D-glucopyranose GU5 "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 a-D-Glcp2OMe3OMe6SO3 # _pdbx_chem_comp_related.comp_id GU5 _pdbx_chem_comp_related.related_comp_id GLC _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 GU5 C1 GLC C1 "Carbohydrate core" 2 GU5 C2 GLC C2 "Carbohydrate core" 3 GU5 C3 GLC C3 "Carbohydrate core" 4 GU5 C4 GLC C4 "Carbohydrate core" 5 GU5 C5 GLC C5 "Carbohydrate core" 6 GU5 C6 GLC C6 "Carbohydrate core" 7 GU5 O1 GLC O1 "Carbohydrate core" 8 GU5 O2 GLC O2 "Carbohydrate core" 9 GU5 O3 GLC O3 "Carbohydrate core" 10 GU5 O4 GLC O4 "Carbohydrate core" 11 GU5 O5 GLC O5 "Carbohydrate core" 12 GU5 O6 GLC O6 "Carbohydrate core" 13 GU5 H1 GLC H1 "Carbohydrate core" 14 GU5 H2 GLC H2 "Carbohydrate core" 15 GU5 H3 GLC H3 "Carbohydrate core" 16 GU5 H4 GLC H4 "Carbohydrate core" 17 GU5 H5 GLC H5 "Carbohydrate core" 18 GU5 H61 GLC H61 "Carbohydrate core" 19 GU5 H62 GLC H62 "Carbohydrate core" 20 GU5 HO1 GLC HO1 "Carbohydrate core" 21 GU5 HO4 GLC HO4 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support GU5 "CARBOHYDRATE ISOMER" D PDB ? GU5 "CARBOHYDRATE RING" pyranose PDB ? GU5 "CARBOHYDRATE ANOMER" alpha PDB ? GU5 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GU5 "Create component" 2004-06-22 RCSB GU5 "Modify descriptor" 2011-06-04 RCSB GU5 "Other modification" 2020-07-03 RCSB GU5 "Modify parent residue" 2020-07-17 RCSB GU5 "Modify name" 2020-07-17 RCSB GU5 "Modify synonyms" 2020-07-17 RCSB GU5 "Modify linking type" 2020-07-17 RCSB GU5 "Modify leaving atom flag" 2020-07-17 RCSB ##