data_GU9 # _chem_comp.id GU9 _chem_comp.name "2,3,6-tri-O-methyl-alpha-D-glucopyranose" _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C9 H18 O6" _chem_comp.mon_nstd_parent_comp_id GLC _chem_comp.pdbx_synonyms "2,3,6-tri-O-methyl-alpha-D-glucose; 2,3,6-tri-O-methyl-D-glucose; 2,3,6-tri-O-methyl-glucose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-06-22 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 222.236 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GU9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1TB6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 GU9 "2,3,6-tri-O-methyl-alpha-D-glucose" PDB ? 2 GU9 "2,3,6-tri-O-methyl-D-glucose" PDB ? 3 GU9 "2,3,6-tri-O-methyl-glucose" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GU9 C4 C4 C 0 1 N N R 56.485 -3.846 13.688 -0.475 0.302 -0.940 C4 GU9 1 GU9 C5 C5 C 0 1 N N R 56.641 -3.003 12.429 -1.558 -0.718 -1.331 C5 GU9 2 GU9 O5 O5 O 0 1 N N N 57.600 -3.574 11.522 -2.351 -0.253 -2.431 O5 GU9 3 GU9 C6 C6 C 0 1 N N N 57.073 -1.592 12.796 -2.439 -1.157 -0.163 C6 GU9 4 GU9 O6 O6 O 0 1 N N N 58.364 -1.625 13.423 -3.397 -2.082 -0.644 O6 GU9 5 GU9 C9 C9 C 0 1 N N N 58.747 -0.299 13.799 -4.258 -2.537 0.394 C9 GU9 6 GU9 C3 C3 C 0 1 N N S 56.200 -5.294 13.309 -0.999 1.740 -0.832 C3 GU9 7 GU9 O3 O3 O 0 1 N N N 56.094 -6.166 14.449 -1.722 1.906 0.384 O3 GU9 8 GU9 C8 C8 C 0 1 N N N 57.297 -6.261 15.221 -0.900 1.646 1.509 C8 GU9 9 GU9 C2 C2 C 0 1 N N R 57.241 -5.812 12.326 -1.923 2.100 -1.998 C2 GU9 10 GU9 O2 O2 O 0 1 N N N 56.912 -7.164 11.966 -1.147 2.274 -3.184 O2 GU9 11 GU9 C7 C7 C 0 1 N N N 58.090 -7.876 11.574 -0.190 3.313 -3.032 C7 GU9 12 GU9 C1 C1 C 0 1 N N S 57.236 -4.901 11.105 -2.975 1.013 -2.228 C1 GU9 13 GU9 O1 O1 O 0 1 N Y N 55.950 -4.893 10.463 -3.753 1.372 -3.369 O1 GU9 14 GU9 O4 O4 O 0 1 N N N ? ? ? 0.541 0.287 -1.947 O4 GU9 15 GU9 H4 H4 H 0 1 N N N 57.170 -3.630 14.540 -0.001 -0.005 -0.002 H4 GU9 16 GU9 H5 H5 H 0 1 N N N 55.650 -2.976 11.918 -1.058 -1.621 -1.702 H5 GU9 17 GU9 H61 H61 H 0 1 N N N 57.051 -0.905 11.917 -2.951 -0.294 0.260 H61 GU9 18 GU9 H62 H62 H 0 1 N N N 56.314 -1.072 13.426 -1.829 -1.636 0.603 H62 GU9 19 GU9 H91 H91 H 0 1 N N N 59.749 -0.324 14.286 -4.155 -1.886 1.265 H91 GU9 20 GU9 H92 H92 H 0 1 N N N 58.715 0.408 12.937 -3.997 -3.565 0.660 H92 GU9 21 GU9 H93 H93 H 0 1 N N N 57.980 0.195 14.440 -5.291 -2.506 0.038 H93 GU9 22 GU9 H3 H3 H 0 1 N N N 55.201 -5.299 12.813 -0.152 2.436 -0.813 H3 GU9 23 GU9 H81 H81 H 0 1 N N N 57.214 -6.936 16.104 0.086 2.090 1.352 H81 GU9 24 GU9 H82 H82 H 0 1 N N N 58.154 -6.562 14.575 -0.806 0.566 1.652 H82 GU9 25 GU9 H83 H83 H 0 1 N N N 57.643 -5.248 15.533 -1.359 2.090 2.396 H83 GU9 26 GU9 H2 H2 H 0 1 N N N 58.260 -5.809 12.778 -2.428 3.054 -1.810 H2 GU9 27 GU9 H71 H71 H 0 1 N N N 57.834 -8.924 11.294 0.805 2.878 -2.909 H71 GU9 28 GU9 H72 H72 H 0 1 N N N 58.640 -7.351 10.758 -0.445 3.919 -2.159 H72 GU9 29 GU9 H73 H73 H 0 1 N N N 58.880 -7.835 12.359 -0.203 3.942 -3.925 H73 GU9 30 GU9 H1 H1 H 0 1 N N N 57.973 -5.282 10.360 -3.663 0.946 -1.379 H1 GU9 31 GU9 HO1 HO1 H 0 1 N Y N 55.709 -5.769 10.187 -3.654 0.650 -4.008 HO1 GU9 32 GU9 HO4 HO4 H 0 1 N Y N -0.097 -0.525 0.785 1.167 -0.410 -1.697 HO4 GU9 33 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GU9 C4 C5 SING N N 1 GU9 C4 C3 SING N N 2 GU9 C4 O4 SING N N 3 GU9 C4 H4 SING N N 4 GU9 C5 O5 SING N N 5 GU9 C5 C6 SING N N 6 GU9 C5 H5 SING N N 7 GU9 O5 C1 SING N N 8 GU9 C6 O6 SING N N 9 GU9 C6 H61 SING N N 10 GU9 C6 H62 SING N N 11 GU9 O6 C9 SING N N 12 GU9 C9 H91 SING N N 13 GU9 C9 H92 SING N N 14 GU9 C9 H93 SING N N 15 GU9 C3 O3 SING N N 16 GU9 C3 C2 SING N N 17 GU9 C3 H3 SING N N 18 GU9 O3 C8 SING N N 19 GU9 C8 H81 SING N N 20 GU9 C8 H82 SING N N 21 GU9 C8 H83 SING N N 22 GU9 C2 O2 SING N N 23 GU9 C2 C1 SING N N 24 GU9 C2 H2 SING N N 25 GU9 O2 C7 SING N N 26 GU9 C7 H71 SING N N 27 GU9 C7 H72 SING N N 28 GU9 C7 H73 SING N N 29 GU9 C1 O1 SING N N 30 GU9 C1 H1 SING N N 31 GU9 O1 HO1 SING N N 32 GU9 O4 HO4 SING N N 33 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GU9 SMILES ACDLabs 10.04 "O(C)C1C(OC)C(O)C(OC1O)COC" GU9 SMILES_CANONICAL CACTVS 3.341 "COC[C@H]1O[C@H](O)[C@H](OC)[C@@H](OC)[C@@H]1O" GU9 SMILES CACTVS 3.341 "COC[CH]1O[CH](O)[CH](OC)[CH](OC)[CH]1O" GU9 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "COC[C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)OC)OC)O" GU9 SMILES "OpenEye OEToolkits" 1.5.0 "COCC1C(C(C(C(O1)O)OC)OC)O" GU9 InChI InChI 1.03 "InChI=1S/C9H18O6/c1-12-4-5-6(10)7(13-2)8(14-3)9(11)15-5/h5-11H,4H2,1-3H3/t5-,6?,7+,8-,9+/m1/s1" GU9 InChIKey InChI 1.03 LXJBARMBDDODTG-MSMGWUHYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GU9 "SYSTEMATIC NAME" ACDLabs 10.04 "2,3,6-tri-O-methyl-alpha-D-glucopyranose" GU9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,3R,4S,5R,6R)-3,4-dimethoxy-6-(methoxymethyl)oxane-2,5-diol" GU9 "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 "DGlcp[2Me,3Me,6Me]a" GU9 "COMMON NAME" GMML 1.0 2-methyl-3-methyl-6-methyl-a-D-glucopyranose GU9 "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 a-D-Glcp2OMe3OMe6OMe # _pdbx_chem_comp_related.comp_id GU9 _pdbx_chem_comp_related.related_comp_id GLC _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 GU9 C1 GLC C1 "Carbohydrate core" 2 GU9 C2 GLC C2 "Carbohydrate core" 3 GU9 C3 GLC C3 "Carbohydrate core" 4 GU9 C4 GLC C4 "Carbohydrate core" 5 GU9 C5 GLC C5 "Carbohydrate core" 6 GU9 C6 GLC C6 "Carbohydrate core" 7 GU9 O1 GLC O1 "Carbohydrate core" 8 GU9 O2 GLC O2 "Carbohydrate core" 9 GU9 O3 GLC O3 "Carbohydrate core" 10 GU9 O4 GLC O4 "Carbohydrate core" 11 GU9 O5 GLC O5 "Carbohydrate core" 12 GU9 O6 GLC O6 "Carbohydrate core" 13 GU9 H1 GLC H1 "Carbohydrate core" 14 GU9 H2 GLC H2 "Carbohydrate core" 15 GU9 H3 GLC H3 "Carbohydrate core" 16 GU9 H4 GLC H4 "Carbohydrate core" 17 GU9 H5 GLC H5 "Carbohydrate core" 18 GU9 H61 GLC H61 "Carbohydrate core" 19 GU9 H62 GLC H62 "Carbohydrate core" 20 GU9 HO1 GLC HO1 "Carbohydrate core" 21 GU9 HO4 GLC HO4 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support GU9 "CARBOHYDRATE ISOMER" D PDB ? GU9 "CARBOHYDRATE RING" pyranose PDB ? GU9 "CARBOHYDRATE ANOMER" alpha PDB ? GU9 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GU9 "Create component" 2004-06-22 RCSB GU9 "Modify descriptor" 2011-06-04 RCSB GU9 "Other modification" 2020-07-03 RCSB GU9 "Modify parent residue" 2020-07-17 RCSB GU9 "Modify name" 2020-07-17 RCSB GU9 "Modify synonyms" 2020-07-17 RCSB GU9 "Modify linking type" 2020-07-17 RCSB GU9 "Modify leaving atom flag" 2020-07-17 RCSB ##