data_GXL # _chem_comp.id GXL _chem_comp.name alpha-L-galactopyranose _chem_comp.type "L-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "alpha-L-galactose; L-galactose; galactose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-04-18 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 180.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GXL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2BP6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 GXL alpha-L-galactose PDB ? 2 GXL L-galactose PDB ? 3 GXL galactose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GXL C1 C1 C 0 1 N N R 28.877 17.820 59.720 1.424 0.489 -0.382 C1 GXL 1 GXL C2 C2 C 0 1 N N S 27.993 18.731 58.865 0.392 0.498 -1.512 C2 GXL 2 GXL C3 C3 C 0 1 N N R 27.753 20.035 59.589 -0.651 -0.592 -1.244 C3 GXL 3 GXL C4 C4 C 0 1 N N S 29.081 20.672 59.941 -1.222 -0.387 0.163 C4 GXL 4 GXL C5 C5 C 0 1 N N S 29.933 19.689 60.739 -0.067 -0.330 1.166 C5 GXL 5 GXL C6 C6 C 0 1 N N N 31.329 20.240 60.995 -0.629 -0.161 2.579 C6 GXL 6 GXL O1 O1 O 0 1 N Y N 28.175 17.528 60.941 2.043 -0.797 -0.316 O1 GXL 7 GXL O2 O2 O 0 1 N N N 26.711 18.154 58.567 1.044 0.242 -2.757 O2 GXL 8 GXL O3 O3 O 0 1 N N N 26.985 20.924 58.731 -1.700 -0.499 -2.209 O3 GXL 9 GXL O4 O4 O 0 1 N N N 29.702 21.088 58.705 -1.958 0.836 0.206 O4 GXL 10 GXL O5 O5 O 0 1 N N N 30.095 18.484 59.996 0.783 0.771 0.859 O5 GXL 11 GXL O6 O6 O 0 1 N N N 31.243 21.317 61.920 0.447 -0.112 3.517 O6 GXL 12 GXL H1 H1 H 0 1 N N N 29.083 16.872 59.169 2.183 1.246 -0.579 H1 GXL 13 GXL H2 HA H 0 1 N N N 28.521 18.945 57.907 -0.098 1.470 -1.550 H2 GXL 14 GXL H3 H3 H 0 1 N N N 27.179 19.838 60.524 -0.180 -1.573 -1.309 H3 GXL 15 GXL H4 H4 H 0 1 N N N 28.891 21.574 60.569 -1.881 -1.218 0.414 H4 GXL 16 GXL H5 H5 H 0 1 N N N 29.435 19.465 61.711 0.504 -1.256 1.112 H5 GXL 17 GXL H61 H6C1 H 0 1 N N N 31.849 20.531 60.053 -1.278 -1.005 2.815 H61 GXL 18 GXL H62 H6C2 H 0 1 N N N 32.041 19.450 61.329 -1.202 0.764 2.634 H62 GXL 19 GXL HO1 HB H 0 1 N Y N 28.724 16.962 61.472 2.688 -0.760 0.402 HO1 GXL 20 GXL HO2 H2 H 0 1 N Y N 26.162 18.719 58.036 1.695 0.947 -2.882 HO2 GXL 21 GXL HO3 HC H 0 1 N Y N 26.834 21.744 59.186 -1.293 -0.621 -3.078 HO3 GXL 22 GXL HO4 HD H 0 1 N Y N 30.535 21.488 58.926 -2.670 0.758 -0.443 HO4 GXL 23 GXL HO6 H6 H 0 1 N Y N 32.114 21.661 62.080 0.050 -0.005 4.393 HO6 GXL 24 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GXL C1 C2 SING N N 1 GXL C1 O1 SING N N 2 GXL C1 O5 SING N N 3 GXL C1 H1 SING N N 4 GXL C2 C3 SING N N 5 GXL C2 O2 SING N N 6 GXL C2 H2 SING N N 7 GXL C3 C4 SING N N 8 GXL C3 O3 SING N N 9 GXL C3 H3 SING N N 10 GXL C4 C5 SING N N 11 GXL C4 O4 SING N N 12 GXL C4 H4 SING N N 13 GXL C5 C6 SING N N 14 GXL C5 O5 SING N N 15 GXL C5 H5 SING N N 16 GXL C6 O6 SING N N 17 GXL C6 H61 SING N N 18 GXL C6 H62 SING N N 19 GXL O1 HO1 SING N N 20 GXL O2 HO2 SING N N 21 GXL O3 HO3 SING N N 22 GXL O4 HO4 SING N N 23 GXL O6 HO6 SING N N 24 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GXL SMILES ACDLabs 10.04 "OC1C(O)C(OC(O)C1O)CO" GXL SMILES_CANONICAL CACTVS 3.341 "OC[C@@H]1O[C@@H](O)[C@@H](O)[C@H](O)[C@@H]1O" GXL SMILES CACTVS 3.341 "OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O" GXL SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O)O)O)O)O" GXL SMILES "OpenEye OEToolkits" 1.5.0 "C(C1C(C(C(C(O1)O)O)O)O)O" GXL InChI InChI 1.03 "InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3+,4+,5-,6+/m0/s1" GXL InChIKey InChI 1.03 WQZGKKKJIJFFOK-SXUWKVJYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GXL "SYSTEMATIC NAME" ACDLabs 10.04 alpha-L-galactopyranose GXL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3S,4R,5S,6S)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol" GXL "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 LGalpa GXL "COMMON NAME" GMML 1.0 a-L-galactopyranose GXL "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 a-L-Galp GXL "SNFG CARBOHYDRATE SYMBOL" GMML 1.0 Gal # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support GXL "CARBOHYDRATE ISOMER" L PDB ? GXL "CARBOHYDRATE RING" pyranose PDB ? GXL "CARBOHYDRATE ANOMER" alpha PDB ? GXL "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GXL "Create component" 2005-04-18 EBI GXL "Modify descriptor" 2011-06-04 RCSB GXL "Other modification" 2019-08-12 RCSB GXL "Modify leaving atom flag" 2019-09-17 PDBE GXL "Other modification" 2019-12-19 RCSB GXL "Other modification" 2020-07-03 RCSB GXL "Modify name" 2020-07-17 RCSB GXL "Modify synonyms" 2020-07-17 RCSB GXL "Modify atom id" 2020-07-17 RCSB GXL "Modify component atom id" 2020-07-17 RCSB ##