data_GYX # _chem_comp.id GYX _chem_comp.name "N-[(3-acetamidophenyl)methyl]-1-[(1R)-1-naphthalen-1-ylethyl]piperidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H31 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-10-09 _chem_comp.pdbx_modified_date 2020-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 429.554 _chem_comp.one_letter_code ? _chem_comp.three_letter_code GYX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7D7T _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal GYX C19 C1 C 0 1 Y N N -9.827 -31.777 1.552 4.911 -0.616 -0.587 C19 GYX 1 GYX C21 C2 C 0 1 N N N -10.635 -27.100 -2.048 -0.545 3.521 0.031 C21 GYX 2 GYX C22 C3 C 0 1 N N N -11.406 -26.148 -2.958 -1.644 2.802 -0.755 C22 GYX 3 GYX C23 C4 C 0 1 Y N N -13.934 -27.463 -5.500 -4.201 0.314 0.387 C23 GYX 4 GYX C24 C5 C 0 1 Y N N -15.327 -27.286 -5.539 -4.098 0.484 1.734 C24 GYX 5 GYX C25 C6 C 0 1 Y N N -16.155 -28.186 -6.236 -4.736 -0.384 2.617 C25 GYX 6 GYX C26 C7 C 0 1 Y N N -15.617 -29.278 -6.919 -5.483 -1.426 2.159 C26 GYX 7 GYX C27 C8 C 0 1 Y N N -14.209 -29.459 -6.901 -5.613 -1.633 0.775 C27 GYX 8 GYX C10 C9 C 0 1 Y N N -8.689 -31.026 1.246 3.594 -0.964 -0.819 C10 GYX 9 GYX C11 C10 C 0 1 Y N N -7.426 -31.606 1.293 3.156 -2.245 -0.539 C11 GYX 10 GYX C12 C11 C 0 1 Y N N -7.313 -32.954 1.616 4.035 -3.182 -0.027 C12 GYX 11 GYX C13 C12 C 0 1 Y N N -8.455 -33.708 1.905 5.352 -2.841 0.206 C13 GYX 12 GYX C14 C13 C 0 1 Y N N -9.734 -33.141 1.871 5.795 -1.555 -0.073 C14 GYX 13 GYX C16 C14 C 0 1 N N N -12.332 -33.565 2.166 7.445 0.047 0.538 C16 GYX 14 GYX C17 C15 C 0 1 N N N -13.464 -34.535 2.544 8.890 0.454 0.671 C17 GYX 15 GYX C01 C16 C 0 1 N N N -13.656 -24.957 -4.666 -4.475 2.362 -0.985 C01 GYX 16 GYX C02 C17 C 0 1 N N R -12.977 -26.416 -4.684 -3.502 1.263 -0.552 C02 GYX 17 GYX C04 C18 C 0 1 N N N -13.387 -27.621 -2.624 -1.444 0.838 0.650 C04 GYX 18 GYX C05 C19 C 0 1 N N N -12.674 -28.180 -1.378 -0.339 1.498 1.477 C05 GYX 19 GYX C06 C20 C 0 1 N N N -11.496 -27.467 -0.970 0.431 2.486 0.596 C06 GYX 20 GYX C07 C21 C 0 1 N N N -10.662 -28.205 0.090 1.090 1.743 -0.537 C07 GYX 21 GYX C09 C22 C 0 1 N N N -8.778 -29.530 0.935 2.633 0.055 -1.377 C09 GYX 22 GYX C28 C23 C 0 1 Y N N -13.392 -28.581 -6.232 -4.958 -0.754 -0.123 C28 GYX 23 GYX C29 C24 C 0 1 Y N N -11.991 -28.801 -6.243 -5.089 -0.961 -1.507 C29 GYX 24 GYX C30 C25 C 0 1 Y N N -11.477 -29.875 -6.940 -5.839 -1.999 -1.965 C30 GYX 25 GYX C31 C26 C 0 1 Y N N -12.299 -30.772 -7.596 -6.483 -2.864 -1.081 C31 GYX 26 GYX C32 C27 C 0 1 Y N N -13.671 -30.568 -7.581 -6.375 -2.698 0.265 C32 GYX 27 GYX N03 N1 N 0 1 N N N -12.642 -26.699 -3.445 -2.351 1.869 0.132 N03 GYX 28 GYX N08 N2 N 0 1 N N N -9.453 -28.957 -0.225 1.993 0.777 -0.275 N08 GYX 29 GYX N15 N3 N 0 1 N N N -10.914 -33.982 2.194 7.131 -1.207 0.157 N15 GYX 30 GYX O18 O1 O 0 1 N N N -12.638 -32.458 1.845 6.565 0.847 0.775 O18 GYX 31 GYX O20 O2 O 0 1 N N N -11.006 -28.166 1.236 0.807 2.013 -1.685 O20 GYX 32 GYX H1 H1 H 0 1 N N N -10.796 -31.299 1.543 5.253 0.384 -0.810 H1 GYX 33 GYX H2 H2 H 0 1 N N N -10.337 -27.997 -2.611 -0.010 4.202 -0.631 H2 GYX 34 GYX H3 H3 H 0 1 N N N -9.738 -26.599 -1.656 -0.992 4.085 0.849 H3 GYX 35 GYX H4 H4 H 0 1 N N N -10.771 -25.900 -3.821 -2.349 3.536 -1.147 H4 GYX 36 GYX H5 H5 H 0 1 N N N -11.631 -25.232 -2.393 -1.198 2.250 -1.582 H5 GYX 37 GYX H6 H6 H 0 1 N N N -15.770 -26.445 -5.026 -3.511 1.303 2.123 H6 GYX 38 GYX H7 H7 H 0 1 N N N -17.224 -28.029 -6.242 -4.638 -0.227 3.681 H7 GYX 39 GYX H8 H8 H 0 1 N N N -16.257 -29.969 -7.448 -5.975 -2.089 2.856 H8 GYX 40 GYX H9 H9 H 0 1 N N N -6.545 -31.018 1.082 2.126 -2.514 -0.721 H9 GYX 41 GYX H10 H10 H 0 1 N N N -6.339 -33.421 1.644 3.690 -4.182 0.191 H10 GYX 42 GYX H11 H11 H 0 1 N N N -8.347 -34.752 2.160 6.038 -3.574 0.607 H11 GYX 43 GYX H12 H12 H 0 1 N N N -14.433 -34.022 2.452 9.390 0.338 -0.291 H12 GYX 44 GYX H13 H13 H 0 1 N N N -13.444 -35.403 1.869 8.946 1.496 0.986 H13 GYX 45 GYX H14 H14 H 0 1 N N N -13.325 -34.874 3.581 9.378 -0.177 1.413 H14 GYX 46 GYX H15 H15 H 0 1 N N N -13.009 -24.258 -4.117 -5.328 1.912 -1.492 H15 GYX 47 GYX H16 H16 H 0 1 N N N -13.787 -24.601 -5.698 -4.820 2.908 -0.107 H16 GYX 48 GYX H17 H17 H 0 1 N N N -14.637 -25.015 -4.171 -3.969 3.048 -1.664 H17 GYX 49 GYX H18 H18 H 0 1 N N N -12.067 -26.314 -5.294 -3.157 0.717 -1.430 H18 GYX 50 GYX H19 H19 H 0 1 N N N -14.295 -27.102 -2.282 -0.998 0.295 -0.184 H19 GYX 51 GYX H20 H20 H 0 1 N N N -13.669 -28.476 -3.257 -2.003 0.144 1.278 H20 GYX 52 GYX H21 H21 H 0 1 N N N -13.388 -28.162 -0.542 -0.783 2.030 2.319 H21 GYX 53 GYX H22 H22 H 0 1 N N N -12.385 -29.220 -1.591 0.344 0.733 1.849 H22 GYX 54 GYX H23 H23 H 0 1 N N N -11.833 -26.535 -0.493 1.191 2.990 1.193 H23 GYX 55 GYX H24 H24 H 0 1 N N N -7.737 -29.181 0.871 3.177 0.760 -2.007 H24 GYX 56 GYX H25 H25 H 0 1 N N N -9.264 -29.076 1.811 1.872 -0.451 -1.971 H25 GYX 57 GYX H26 H26 H 0 1 N N N -11.331 -28.133 -5.710 -4.596 -0.298 -2.204 H26 GYX 58 GYX H27 H27 H 0 1 N N N -10.407 -30.018 -6.974 -5.938 -2.156 -3.029 H27 GYX 59 GYX H28 H28 H 0 1 N N N -11.878 -31.621 -8.114 -7.069 -3.683 -1.471 H28 GYX 60 GYX H29 H29 H 0 1 N N N -14.326 -31.259 -8.091 -6.879 -3.376 0.938 H29 GYX 61 GYX H31 H31 H 0 1 N N N -9.114 -29.071 -1.159 2.219 0.561 0.643 H31 GYX 62 GYX H32 H32 H 0 1 N N N -10.731 -34.929 2.458 7.831 -1.869 0.042 H32 GYX 63 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GYX C31 C32 DOUB Y N 1 GYX C31 C30 SING Y N 2 GYX C32 C27 SING Y N 3 GYX C30 C29 DOUB Y N 4 GYX C26 C27 DOUB Y N 5 GYX C26 C25 SING Y N 6 GYX C27 C28 SING Y N 7 GYX C29 C28 SING Y N 8 GYX C25 C24 DOUB Y N 9 GYX C28 C23 DOUB Y N 10 GYX C24 C23 SING Y N 11 GYX C23 C02 SING N N 12 GYX C02 C01 SING N N 13 GYX C02 N03 SING N N 14 GYX N03 C22 SING N N 15 GYX N03 C04 SING N N 16 GYX C22 C21 SING N N 17 GYX C04 C05 SING N N 18 GYX C21 C06 SING N N 19 GYX C05 C06 SING N N 20 GYX C06 C07 SING N N 21 GYX N08 C07 SING N N 22 GYX N08 C09 SING N N 23 GYX C07 O20 DOUB N N 24 GYX C09 C10 SING N N 25 GYX C10 C11 DOUB Y N 26 GYX C10 C19 SING Y N 27 GYX C11 C12 SING Y N 28 GYX C19 C14 DOUB Y N 29 GYX C12 C13 DOUB Y N 30 GYX O18 C16 DOUB N N 31 GYX C14 C13 SING Y N 32 GYX C14 N15 SING N N 33 GYX C16 N15 SING N N 34 GYX C16 C17 SING N N 35 GYX C19 H1 SING N N 36 GYX C21 H2 SING N N 37 GYX C21 H3 SING N N 38 GYX C22 H4 SING N N 39 GYX C22 H5 SING N N 40 GYX C24 H6 SING N N 41 GYX C25 H7 SING N N 42 GYX C26 H8 SING N N 43 GYX C11 H9 SING N N 44 GYX C12 H10 SING N N 45 GYX C13 H11 SING N N 46 GYX C17 H12 SING N N 47 GYX C17 H13 SING N N 48 GYX C17 H14 SING N N 49 GYX C01 H15 SING N N 50 GYX C01 H16 SING N N 51 GYX C01 H17 SING N N 52 GYX C02 H18 SING N N 53 GYX C04 H19 SING N N 54 GYX C04 H20 SING N N 55 GYX C05 H21 SING N N 56 GYX C05 H22 SING N N 57 GYX C06 H23 SING N N 58 GYX C09 H24 SING N N 59 GYX C09 H25 SING N N 60 GYX C29 H26 SING N N 61 GYX C30 H27 SING N N 62 GYX C31 H28 SING N N 63 GYX C32 H29 SING N N 64 GYX N08 H31 SING N N 65 GYX N15 H32 SING N N 66 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor GYX InChI InChI 1.03 "InChI=1S/C27H31N3O2/c1-19(25-12-6-9-22-8-3-4-11-26(22)25)30-15-13-23(14-16-30)27(32)28-18-21-7-5-10-24(17-21)29-20(2)31/h3-12,17,19,23H,13-16,18H2,1-2H3,(H,28,32)(H,29,31)/t19-/m1/s1" GYX InChIKey InChI 1.03 YQRGVYYHRJBSOR-LJQANCHMSA-N GYX SMILES_CANONICAL CACTVS 3.385 "C[C@@H](N1CCC(CC1)C(=O)NCc2cccc(NC(C)=O)c2)c3cccc4ccccc34" GYX SMILES CACTVS 3.385 "C[CH](N1CCC(CC1)C(=O)NCc2cccc(NC(C)=O)c2)c3cccc4ccccc34" GYX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1cccc2c1cccc2)N3CCC(CC3)C(=O)NCc4cccc(c4)NC(=O)C" GYX SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1cccc2c1cccc2)N3CCC(CC3)C(=O)NCc4cccc(c4)NC(=O)C" # _pdbx_chem_comp_identifier.comp_id GYX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(3-acetamidophenyl)methyl]-1-[(1~{R})-1-naphthalen-1-ylethyl]piperidine-4-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site GYX "Create component" 2020-10-09 PDBJ GYX "Initial release" 2020-11-04 RCSB ##