data_H1Q # _chem_comp.id H1Q _chem_comp.name "adenosine divanadate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H13 N5 O11 V2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge -5 _chem_comp.pdbx_initial_date 2018-11-05 _chem_comp.pdbx_modified_date 2019-03-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 481.120 _chem_comp.one_letter_code ? _chem_comp.three_letter_code H1Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6HWR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal H1Q V1 V1 V 0 1 N N N -79.489 5.659 34.614 5.506 1.059 -0.035 V1 H1Q 1 H1Q "C1'" C1 C 0 1 N N R -76.820 7.346 41.462 -3.037 -0.937 -1.031 "C1'" H1Q 2 H1Q "C2'" C2 C 0 1 N N R -77.639 6.320 42.182 -3.308 -2.297 -0.359 "C2'" H1Q 3 H1Q "C3'" C3 C 0 1 N N S -77.259 5.106 41.367 -1.916 -2.758 0.138 "C3'" H1Q 4 H1Q "C4'" C4 C 0 1 N N R -77.408 5.637 39.980 -1.132 -1.423 0.191 "C4'" H1Q 5 H1Q "C5'" C5 C 0 1 N N N -78.755 5.320 39.360 0.372 -1.676 0.067 "C5'" H1Q 6 H1Q O2 O1 O -1 1 N N N -80.677 4.284 34.147 5.386 0.285 -1.700 O2 H1Q 7 H1Q "O2'" O2 O 0 1 N N N -77.257 6.208 43.544 -4.206 -2.141 0.741 "O2'" H1Q 8 H1Q O3 O3 O -1 1 N N N -80.019 6.662 33.201 7.342 1.043 -0.161 O3 H1Q 9 H1Q "O3'" O4 O 0 1 N N N -75.864 4.888 41.513 -2.008 -3.348 1.436 "O3'" H1Q 10 H1Q O4 O5 O 0 1 N N N -80.140 6.927 35.915 5.534 2.892 0.128 O4 H1Q 11 H1Q "O4'" O6 O 0 1 N N N -77.138 7.014 40.148 -1.622 -0.698 -0.957 "O4'" H1Q 12 H1Q O5 O7 O -1 1 N N N -77.833 5.568 34.217 5.600 0.001 1.467 O5 H1Q 13 H1Q "O5'" O8 O 0 1 N N N -79.725 4.320 39.018 1.071 -0.431 0.131 "O5'" H1Q 14 H1Q O6 O9 O -1 1 N N N -80.321 2.710 36.701 3.528 -1.640 1.368 O6 H1Q 15 H1Q O7 O10 O -1 1 N N N -81.549 5.279 37.594 3.326 -1.372 -1.618 O7 H1Q 16 H1Q O9 O11 O 0 1 N N N -78.981 4.875 36.285 3.671 1.076 0.090 O9 H1Q 17 H1Q V V2 V 0 1 N N N -80.193 4.331 37.442 2.899 -0.592 -0.007 V H1Q 18 H1Q "H1'" H1 H 0 1 N N N -76.519 8.323 41.869 -3.354 -0.969 -2.074 "H1'" H1Q 19 H1Q "H2'" H3 H 0 1 N N N -78.712 6.535 42.074 -3.711 -3.006 -1.082 "H2'" H1Q 20 H1Q "H3'" H4 H 0 1 N N N -77.889 4.228 41.573 -1.460 -3.450 -0.570 "H3'" H1Q 21 H1Q "H4'" H5 H 0 1 N N N -76.628 5.185 39.350 -1.356 -0.882 1.111 "H4'" H1Q 22 H1Q "H5'2" H6 H 0 0 N N N -78.602 5.766 38.366 0.701 -2.320 0.882 "H5'2" H1Q 23 H1Q "H5'1" H7 H 0 0 N N N -79.390 5.983 39.966 0.581 -2.161 -0.887 "H5'1" H1Q 24 H1Q H9 H9 H 0 1 N N N -77.517 6.993 44.012 -4.411 -2.967 1.201 H9 H1Q 25 H1Q "HO3'" H11 H 0 0 N N N -75.686 4.546 42.381 -2.565 -4.138 1.471 "HO3'" H1Q 26 H1Q N9 N9 N 0 1 Y N N ? ? ? -3.763 0.121 -0.324 N9 H1Q 27 H1Q C8 C6 C 0 1 Y N N ? ? ? -3.264 0.922 0.660 C8 H1Q 28 H1Q N7 N7 N 0 1 Y N N ? ? ? -4.180 1.752 1.065 N7 H1Q 29 H1Q C5 C7 C 0 1 Y N N ? ? ? -5.322 1.538 0.369 C5 H1Q 30 H1Q C4 C8 C 0 1 Y N N ? ? ? -5.066 0.493 -0.535 C4 H1Q 31 H1Q N3 N3 N 0 1 Y N N ? ? ? -6.039 0.087 -1.345 N3 H1Q 32 H1Q C2 C10 C 0 1 Y N N ? ? ? -7.226 0.653 -1.305 C2 H1Q 33 H1Q N1 N1 N 0 1 Y N N ? ? ? -7.514 1.638 -0.473 N1 H1Q 34 H1Q C6 C9 C 0 1 Y N N ? ? ? -6.604 2.113 0.372 C6 H1Q 35 H1Q N6 N6 N 0 1 N N N ? ? ? -6.914 3.149 1.236 N6 H1Q 36 H1Q H8 H2 H 0 1 N N N ? ? ? -2.256 0.874 1.047 H8 H1Q 37 H1Q H2 H8 H 0 1 N N N ? ? ? -7.994 0.300 -1.977 H2 H1Q 38 H1Q HN61 H13 H 0 0 N N N ? ? ? -6.242 3.486 1.849 HN61 H1Q 39 H1Q HN62 H14 H 0 0 N N N ? ? ? -7.802 3.538 1.229 HN62 H1Q 40 H1Q HO4 HO4 H 0 1 N N N -80.529 7.669 35.467 6.421 3.276 0.102 HO4 H1Q 41 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal H1Q O3 V1 SING N N 1 H1Q O2 V1 SING N N 2 H1Q O5 V1 SING N N 3 H1Q V1 O4 SING N N 4 H1Q V1 O9 SING N N 5 H1Q O9 V SING N N 6 H1Q O6 V SING N N 7 H1Q V O7 SING N N 8 H1Q V "O5'" SING N N 9 H1Q "O5'" "C5'" SING N N 10 H1Q "C5'" "C4'" SING N N 11 H1Q "C4'" "O4'" SING N N 12 H1Q "C4'" "C3'" SING N N 13 H1Q "O4'" "C1'" SING N N 14 H1Q "C3'" "O3'" SING N N 15 H1Q "C3'" "C2'" SING N N 16 H1Q "C1'" "C2'" SING N N 17 H1Q "C2'" "O2'" SING N N 18 H1Q "C1'" "H1'" SING N N 19 H1Q "C2'" "H2'" SING N N 20 H1Q "C3'" "H3'" SING N N 21 H1Q "C4'" "H4'" SING N N 22 H1Q "C5'" "H5'2" SING N N 23 H1Q "C5'" "H5'1" SING N N 24 H1Q "O2'" H9 SING N N 25 H1Q "O3'" "HO3'" SING N N 26 H1Q "C1'" N9 SING N N 27 H1Q N9 C8 SING Y N 28 H1Q C8 N7 DOUB Y N 29 H1Q N7 C5 SING Y N 30 H1Q C5 C4 DOUB Y N 31 H1Q C4 N9 SING Y N 32 H1Q C4 N3 SING Y N 33 H1Q N3 C2 DOUB Y N 34 H1Q C2 N1 SING Y N 35 H1Q C6 C5 SING Y N 36 H1Q C6 N1 DOUB Y N 37 H1Q C6 N6 SING N N 38 H1Q C8 H8 SING N N 39 H1Q C2 H2 SING N N 40 H1Q N6 HN61 SING N N 41 H1Q N6 HN62 SING N N 42 H1Q O4 HO4 SING N N 43 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor H1Q InChI InChI 1.03 "InChI=1S/C10H12N5O4.H2O.6O.2V/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(18)6(17)4(1-16)19-10;;;;;;;;;/h2-4,6-7,10,17-18H,1H2,(H2,11,12,13);1H2;;;;;;;;/q-1;;;5*-1;2*+1/p-1/t4-,6-,7-,10?;;;;;;;;;/m1........./s1" H1Q InChIKey InChI 1.03 SCTBHSLYHREHHB-OUJHSJFHSA-M H1Q SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(cnc12)[C@H]3O[C@H](CO[V]([O-])([O-])O[V](O)([O-])([O-])[O-])[C@@H](O)[C@H]3O" H1Q SMILES CACTVS 3.385 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[V]([O-])([O-])O[V](O)([O-])([O-])[O-])[CH](O)[CH]3O" H1Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1nc(c2c(n1)n(cn2)[C@@H]3[C@@H]([C@@H]([C@H](O3)CO[V]([O-])([O-])O[V](O)([O-])([O-])[O-])O)O)N" H1Q SMILES "OpenEye OEToolkits" 2.0.6 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CO[V]([O-])([O-])O[V](O)([O-])([O-])[O-])O)O)N" # _pdbx_chem_comp_identifier.comp_id H1Q _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "[[(2~{R},3~{S},4~{R},5~{S})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-bis(oxidanidyl)vanadio]oxy-tris(oxidanidyl)-oxidanyl-vanadium" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site H1Q "Create component" 2018-11-05 EBI H1Q "Initial release" 2019-04-03 RCSB ##