data_H5N # _chem_comp.id H5N _chem_comp.name "(2~{R},3~{R},4~{S},5~{R},6~{S})-4-[4-[4-azido-2,3,5,6-tetrakis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-oxane-3,5-diol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H18 F4 N6 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-11-16 _chem_comp.pdbx_modified_date 2019-01-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 526.464 _chem_comp.one_letter_code ? _chem_comp.three_letter_code H5N _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6I76 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal H5N N1 N1 N 0 1 Y N N -16.129 7.779 -1.318 -0.336 1.436 -0.777 N1 H5N 1 H5N N3 N2 N 1 1 N N N -8.593 10.469 1.834 -8.202 -1.263 0.422 N3 H5N 2 H5N C4 C1 C 0 1 Y N N -23.301 10.536 -2.671 6.370 -2.582 -0.344 C4 H5N 3 H5N C5 C2 C 0 1 Y N N -23.552 8.122 -3.965 7.449 -0.030 -0.350 C5 H5N 4 H5N C6 C3 C 0 1 Y N N -22.445 8.366 -3.171 6.079 -0.195 -0.398 C6 H5N 5 H5N C7 C4 C 0 1 Y N N -22.310 9.580 -2.510 5.533 -1.473 -0.395 C7 H5N 6 H5N C8 C5 C 0 1 N N S -19.858 8.449 -1.580 3.167 0.017 -0.511 C8 H5N 7 H5N C10 C6 C 0 1 N N N -20.222 5.273 0.250 3.495 2.659 2.101 C10 H5N 8 H5N C13 C7 C 0 1 Y N N -15.447 8.162 -0.266 -1.158 0.511 -0.234 C13 H5N 9 H5N C15 C8 C 0 1 Y N N -12.947 8.669 0.081 -3.701 0.217 -0.222 C15 H5N 10 H5N C17 C9 C 0 1 Y N N -10.736 9.621 0.160 -4.798 -1.604 0.900 C17 H5N 11 H5N C20 C10 C 0 1 Y N N -12.844 8.446 1.439 -4.917 0.758 -0.660 C20 H5N 12 H5N C21 C11 C 0 1 N N R -18.387 8.808 -1.398 1.647 0.003 -0.694 C21 H5N 13 H5N C1 C12 C 0 1 N N N -25.760 8.802 -4.992 9.773 -0.952 -0.236 C1 H5N 14 H5N C11 C13 C 0 1 N N R -18.102 6.492 -0.466 1.547 2.113 0.633 C11 H5N 15 H5N C12 C14 C 0 1 N N S -17.566 7.513 -1.473 1.125 1.443 -0.678 C12 H5N 16 H5N C14 C15 C 0 1 Y N N -14.143 8.285 -0.666 -2.439 0.899 -0.577 C14 H5N 17 H5N C16 C16 C 0 1 Y N N -11.861 9.256 -0.542 -3.653 -0.952 0.550 C16 H5N 18 H5N C18 C17 C 0 1 Y N N -10.627 9.395 1.529 -6.088 -1.072 0.451 C18 H5N 19 H5N C19 C18 C 0 1 Y N N -11.721 8.803 2.148 -6.100 0.155 -0.350 C19 H5N 20 H5N C2 C19 C 0 1 Y N N -24.550 9.068 -4.127 8.278 -1.136 -0.288 C2 H5N 21 H5N C3 C20 C 0 1 Y N N -24.402 10.274 -3.468 7.739 -2.409 -0.290 C3 H5N 22 H5N C9 C21 C 0 1 N N R -19.590 6.234 -0.733 3.070 2.045 0.765 C9 H5N 23 H5N F1 F1 F 0 1 N N N -11.919 9.493 -1.862 -2.458 -1.439 0.951 F1 H5N 24 H5N F2 F2 F 0 1 N N N -9.721 10.188 -0.519 -4.743 -2.733 1.640 F2 H5N 25 H5N F3 F3 F 0 1 N N N -11.692 8.573 3.474 -7.269 0.683 -0.776 F3 H5N 26 H5N F4 F4 F 0 1 N N N -13.879 7.873 2.071 -4.918 1.890 -1.397 F4 H5N 27 H5N N2 N3 N 0 1 N N N -9.487 9.748 2.325 -7.219 -1.681 0.773 N2 H5N 28 H5N N4 N4 N -1 1 N N N -7.873 11.124 1.258 -9.184 -0.845 0.071 N4 H5N 29 H5N N5 N5 N 0 1 Y N N -14.081 7.942 -1.980 -2.302 2.027 -1.301 N5 H5N 30 H5N N6 N6 N 0 1 Y N N -15.295 7.642 -2.378 -1.050 2.305 -1.400 N6 H5N 31 H5N O1 O1 O 0 1 N N N -20.304 7.477 -0.640 3.492 0.681 0.712 O1 H5N 32 H5N O2 O2 O 0 1 N N N -21.589 5.015 -0.073 4.922 2.701 2.174 O2 H5N 33 H5N O3 O3 O 0 1 N N N -17.952 6.968 0.868 0.942 1.431 1.734 O3 H5N 34 H5N O4 O4 O 0 1 N N N -18.024 9.745 -2.419 1.322 -0.611 -1.943 O4 H5N 35 H5N S1 S1 S 0 1 N N N -20.910 9.943 -1.473 3.786 -1.688 -0.457 S1 H5N 36 H5N H5 H1 H 0 1 N N N -23.214 11.490 -2.172 5.950 -3.576 -0.341 H5 H5N 37 H5N H6 H2 H 0 1 N N N -23.639 7.171 -4.470 7.873 0.963 -0.353 H6 H5N 38 H5N H7 H3 H 0 1 N N N -21.682 7.609 -3.065 5.432 0.669 -0.446 H7 H5N 39 H5N H8 H4 H 0 1 N N N -19.999 8.069 -2.603 3.628 0.545 -1.345 H8 H5N 40 H5N H10 H5 H 0 1 N N N -19.665 4.325 0.230 3.097 3.671 2.178 H10 H5N 41 H5N H11 H6 H 0 1 N N N -20.169 5.708 1.259 3.107 2.052 2.919 H11 H5N 42 H5N H14 H7 H 0 1 N N N -15.838 8.345 0.724 -0.872 -0.353 0.348 H14 H5N 43 H5N H15 H8 H 0 1 N N N -18.250 9.258 -0.404 1.188 -0.560 0.119 H15 H5N 44 H5N H3 H9 H 0 1 N N N -26.556 8.350 -4.382 10.094 -0.880 0.803 H3 H5N 45 H5N H1 H10 H 0 1 N N N -26.120 9.749 -5.420 10.260 -1.805 -0.709 H1 H5N 46 H5N H2 H11 H 0 1 N N N -25.485 8.113 -5.805 10.045 -0.039 -0.765 H2 H5N 47 H5N H12 H12 H 0 1 N N N -17.553 5.548 -0.595 1.226 3.155 0.630 H12 H5N 48 H5N H13 H13 H 0 1 N N N -17.723 7.090 -2.476 1.545 1.992 -1.521 H13 H5N 49 H5N H4 H14 H 0 1 N N N -25.165 11.031 -3.578 8.389 -3.270 -0.250 H4 H5N 50 H5N H9 H15 H 0 1 N N N -19.695 5.821 -1.747 3.531 2.600 -0.053 H9 H5N 51 H5N H16 H17 H 0 1 N N N -21.956 4.410 0.561 5.262 3.079 2.996 H16 H5N 52 H5N H17 H18 H 0 1 N N N -18.290 6.321 1.476 1.168 1.801 2.598 H17 H5N 53 H5N H18 H19 H 0 1 N N N -17.109 9.981 -2.322 1.627 -1.525 -2.023 H18 H5N 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal H5N C1 C2 SING N N 1 H5N C2 C5 DOUB Y N 2 H5N C2 C3 SING Y N 3 H5N C5 C6 SING Y N 4 H5N C3 C4 DOUB Y N 5 H5N C6 C7 DOUB Y N 6 H5N C4 C7 SING Y N 7 H5N C7 S1 SING N N 8 H5N O4 C21 SING N N 9 H5N N6 N5 DOUB Y N 10 H5N N6 N1 SING Y N 11 H5N N5 C14 SING Y N 12 H5N F1 C16 SING N N 13 H5N C8 S1 SING N N 14 H5N C8 C21 SING N N 15 H5N C8 O1 SING N N 16 H5N C12 C21 SING N N 17 H5N C12 N1 SING N N 18 H5N C12 C11 SING N N 19 H5N N1 C13 SING Y N 20 H5N C9 O1 SING N N 21 H5N C9 C11 SING N N 22 H5N C9 C10 SING N N 23 H5N C14 C13 DOUB Y N 24 H5N C14 C15 SING N N 25 H5N C16 C15 DOUB Y N 26 H5N C16 C17 SING Y N 27 H5N F2 C17 SING N N 28 H5N C11 O3 SING N N 29 H5N O2 C10 SING N N 30 H5N C15 C20 SING Y N 31 H5N C17 C18 DOUB Y N 32 H5N N4 N3 DOUB N N 33 H5N C20 F4 SING N N 34 H5N C20 C19 DOUB Y N 35 H5N C18 C19 SING Y N 36 H5N C18 N2 SING N N 37 H5N N3 N2 DOUB N N 38 H5N C19 F3 SING N N 39 H5N C4 H5 SING N N 40 H5N C5 H6 SING N N 41 H5N C6 H7 SING N N 42 H5N C8 H8 SING N N 43 H5N C10 H10 SING N N 44 H5N C10 H11 SING N N 45 H5N C13 H14 SING N N 46 H5N C21 H15 SING N N 47 H5N C1 H3 SING N N 48 H5N C1 H1 SING N N 49 H5N C1 H2 SING N N 50 H5N C11 H12 SING N N 51 H5N C12 H13 SING N N 52 H5N C3 H4 SING N N 53 H5N C9 H9 SING N N 54 H5N O2 H16 SING N N 55 H5N O3 H17 SING N N 56 H5N O4 H18 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor H5N InChI InChI 1.03 "InChI=1S/C21H18F4N6O4S/c1-8-2-4-9(5-3-8)36-21-20(34)18(19(33)11(7-32)35-21)31-6-10(27-30-31)12-13(22)15(24)17(28-29-26)16(25)14(12)23/h2-6,11,18-21,32-34H,7H2,1H3/t11-,18+,19+,20-,21+/m1/s1" H5N InChIKey InChI 1.03 FIXMLRNYDRGIEZ-WZZIOWGKSA-N H5N SMILES_CANONICAL CACTVS 3.385 "Cc1ccc(S[C@@H]2O[C@H](CO)[C@H](O)[C@@H]([C@H]2O)n3cc(nn3)c4c(F)c(F)c(N=[N+]=[N-])c(F)c4F)cc1" H5N SMILES CACTVS 3.385 "Cc1ccc(S[CH]2O[CH](CO)[CH](O)[CH]([CH]2O)n3cc(nn3)c4c(F)c(F)c(N=[N+]=[N-])c(F)c4F)cc1" H5N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1ccc(cc1)S[C@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)n3cc(nn3)c4c(c(c(c(c4F)F)N=[N+]=[N-])F)F)O" H5N SMILES "OpenEye OEToolkits" 2.0.6 "Cc1ccc(cc1)SC2C(C(C(C(O2)CO)O)n3cc(nn3)c4c(c(c(c(c4F)F)N=[N+]=[N-])F)F)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier H5N "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R},3~{R},4~{S},5~{R},6~{S})-4-[4-[4-azido-2,3,5,6-tetrakis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-oxane-3,5-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site H5N "Create component" 2018-11-16 EBI H5N "Initial release" 2019-01-23 RCSB #