data_H5P # _chem_comp.id H5P _chem_comp.name "HYDANTOCIDIN-5'-PHOSPHATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H11 N2 O9 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces HNP _chem_comp.formula_weight 298.144 _chem_comp.one_letter_code ? _chem_comp.three_letter_code H5P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1JUY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal H5P C2 C2 C 0 1 N N N -10.728 52.851 51.451 -0.146 -1.062 -2.552 C2 H5P 1 H5P O2 O2 O 0 1 N N N -10.133 52.861 52.532 0.536 -2.014 -2.242 O2 H5P 2 H5P N3 N3 N 0 1 N N N -10.339 52.306 50.236 -1.043 -0.989 -3.559 N3 H5P 3 H5P C4 C4 C 0 1 N N N -11.381 52.304 49.326 -1.621 0.217 -3.618 C4 H5P 4 H5P O4 O4 O 0 1 N N N -11.337 51.847 48.189 -2.461 0.526 -4.440 O4 H5P 5 H5P N5 N5 N 0 1 N N N -12.474 52.899 49.982 -1.163 1.053 -2.663 N5 H5P 6 H5P "C1'" "C1'" C 0 1 N N S -12.196 53.288 51.297 -0.175 0.293 -1.898 "C1'" H5P 7 H5P "C2'" "C2'" C 0 1 N N R -12.337 54.754 51.547 1.204 0.963 -1.941 "C2'" H5P 8 H5P "O2'" "O2'" O 0 1 N N N -11.084 55.382 51.391 2.021 0.372 -2.954 "O2'" H5P 9 H5P "C3'" "C3'" C 0 1 N N S -12.956 54.888 52.933 1.793 0.684 -0.538 "C3'" H5P 10 H5P "O3'" "O3'" O 0 1 N N N -11.976 55.005 53.994 2.999 -0.074 -0.642 "O3'" H5P 11 H5P "C4'" "C4'" C 0 1 N N R -13.782 53.584 52.976 0.696 -0.136 0.176 "C4'" H5P 12 H5P "O4'" "O4'" O 0 1 N N N -13.036 52.630 52.260 -0.531 0.202 -0.513 "O4'" H5P 13 H5P "C5'" "C5'" C 0 1 N N N -15.197 53.778 52.442 0.603 0.257 1.651 "C5'" H5P 14 H5P "O5'" "O5'" O 0 1 N N N -15.285 54.536 51.159 -0.461 -0.466 2.271 "O5'" H5P 15 H5P P P P 0 1 N N N -15.999 53.934 49.833 -0.501 -0.005 3.813 P H5P 16 H5P O1P O1P O 0 1 N N N -15.504 54.889 48.839 -0.744 1.452 3.886 O1P H5P 17 H5P O2P O2P O 0 1 N N N -17.454 54.105 50.073 -1.685 -0.785 4.576 O2P H5P 18 H5P O3P O3P O 0 1 N N N -15.342 52.610 49.638 0.906 -0.350 4.513 O3P H5P 19 H5P HN3 HN3 H 0 1 N N N -9.404 51.951 50.037 -1.245 -1.720 -4.164 HN3 H5P 20 H5P HN5 HN5 H 0 1 N N N -13.385 53.036 49.544 -1.435 1.971 -2.513 HN5 H5P 21 H5P "H2'" "H2'" H 0 1 N N N -13.003 55.272 50.818 1.104 2.036 -2.108 "H2'" H5P 22 H5P "HO2'" "'HO2" H 0 0 N N N -11.174 56.314 51.550 2.891 0.787 -2.889 "HO2'" H5P 23 H5P "H3'" "H3'" H 0 1 N N N -13.553 55.816 53.096 1.976 1.619 -0.008 "H3'" H5P 24 H5P "HO3'" "'HO3" H 0 0 N N N -12.362 55.089 54.858 3.302 -0.243 0.259 "HO3'" H5P 25 H5P "H4'" "H4'" H 0 1 N N N -13.944 53.237 54.023 0.901 -1.202 0.081 "H4'" H5P 26 H5P "H5'1" "1H5'" H 0 0 N N N -15.840 54.256 53.218 1.543 0.019 2.151 "H5'1" H5P 27 H5P "H5'2" "2H5'" H 0 0 N N N -15.711 52.793 52.345 0.410 1.327 1.731 "H5'2" H5P 28 H5P HOP2 2HOP H 0 0 N N N -17.872 53.752 49.296 -1.674 -0.481 5.494 HOP2 H5P 29 H5P HOP3 3HOP H 0 0 N N N -15.760 52.257 48.861 1.026 -1.307 4.444 HOP3 H5P 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal H5P C2 O2 DOUB N N 1 H5P C2 N3 SING N N 2 H5P C2 "C1'" SING N N 3 H5P N3 C4 SING N N 4 H5P N3 HN3 SING N N 5 H5P C4 O4 DOUB N N 6 H5P C4 N5 SING N N 7 H5P N5 "C1'" SING N N 8 H5P N5 HN5 SING N N 9 H5P "C1'" "C2'" SING N N 10 H5P "C1'" "O4'" SING N N 11 H5P "C2'" "O2'" SING N N 12 H5P "C2'" "C3'" SING N N 13 H5P "C2'" "H2'" SING N N 14 H5P "O2'" "HO2'" SING N N 15 H5P "C3'" "O3'" SING N N 16 H5P "C3'" "C4'" SING N N 17 H5P "C3'" "H3'" SING N N 18 H5P "O3'" "HO3'" SING N N 19 H5P "C4'" "O4'" SING N N 20 H5P "C4'" "C5'" SING N N 21 H5P "C4'" "H4'" SING N N 22 H5P "C5'" "O5'" SING N N 23 H5P "C5'" "H5'1" SING N N 24 H5P "C5'" "H5'2" SING N N 25 H5P "O5'" P SING N N 26 H5P P O1P DOUB N N 27 H5P P O2P SING N N 28 H5P P O3P SING N N 29 H5P O2P HOP2 SING N N 30 H5P O3P HOP3 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor H5P SMILES ACDLabs 10.04 "O=C2NC(=O)NC21OC(C(O)C1O)COP(=O)(O)O" H5P SMILES_CANONICAL CACTVS 3.341 "O[C@H]1[C@@H](O)[C@]2(NC(=O)NC2=O)O[C@@H]1CO[P](O)(O)=O" H5P SMILES CACTVS 3.341 "O[CH]1[CH](O)[C]2(NC(=O)NC2=O)O[CH]1CO[P](O)(O)=O" H5P SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H]1[C@H]([C@H]([C@]2(O1)C(=O)NC(=O)N2)O)O)OP(=O)(O)O" H5P SMILES "OpenEye OEToolkits" 1.5.0 "C(C1C(C(C2(O1)C(=O)NC(=O)N2)O)O)OP(=O)(O)O" H5P InChI InChI 1.03 "InChI=1S/C7H11N2O9P/c10-3-2(1-17-19(14,15)16)18-7(4(3)11)5(12)8-6(13)9-7/h2-4,10-11H,1H2,(H2,14,15,16)(H2,8,9,12,13)/t2-,3-,4-,7+/m1/s1" H5P InChIKey InChI 1.03 HVXIMXHBUJADCC-GTBMBKLPSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier H5P "SYSTEMATIC NAME" ACDLabs 10.04 "[(5S,7R,8S,9R)-8,9-dihydroxy-2,4-dioxo-6-oxa-1,3-diazaspiro[4.4]non-7-yl]methyl dihydrogen phosphate" H5P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(5S,6R,7S,8R)-6,7-dihydroxy-1,3-dioxo-9-oxa-2,4-diazaspiro[4.4]nonan-8-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site H5P "Create component" 1999-07-08 RCSB H5P "Modify descriptor" 2011-06-04 RCSB #