data_H5R # _chem_comp.id H5R _chem_comp.name "2,7-dimethoxy-9-(piperidin-4-ylmethylsulfanyl)acridine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H24 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-16 _chem_comp.pdbx_modified_date 2021-11-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 368.492 _chem_comp.one_letter_code ? _chem_comp.three_letter_code H5R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7DG4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal H5R C13 C1 C 0 1 Y N N 83.874 143.275 15.215 2.980 0.523 0.337 C13 H5R 1 H5R C15 C2 C 0 1 Y N N 84.757 141.783 13.564 4.410 -1.401 0.344 C15 H5R 2 H5R C17 C3 C 0 1 N N N 84.605 139.531 12.186 4.888 -4.018 -0.120 C17 H5R 3 H5R C20 C4 C 0 1 N N N 79.586 141.354 16.776 -1.423 -1.200 0.439 C20 H5R 4 H5R C21 C5 C 0 1 N N N 79.486 140.546 15.479 -2.641 -2.068 0.114 C21 H5R 5 H5R C22 C6 C 0 1 N N N 78.294 141.071 14.667 -3.710 -1.213 -0.572 C22 H5R 6 H5R C26 C7 C 0 1 N N N 79.295 139.085 15.876 -3.215 -2.649 1.409 C26 H5R 7 H5R C01 C8 C 0 1 N N N 79.710 144.472 20.654 -2.063 5.693 -0.023 C01 H5R 8 H5R C04 C9 C 0 1 Y N N 81.350 143.944 18.452 -0.697 2.340 -0.398 C04 H5R 9 H5R C05 C10 C 0 1 Y N N 81.288 145.241 19.032 -0.817 3.670 -0.115 C05 H5R 10 H5R C06 C11 C 0 1 Y N N 82.073 146.278 18.493 0.264 4.390 0.403 C06 H5R 11 H5R C07 C12 C 0 1 Y N N 82.918 146.043 17.403 1.460 3.789 0.638 C07 H5R 12 H5R C08 C13 C 0 1 Y N N 82.205 143.718 17.361 0.525 1.687 -0.167 C08 H5R 13 H5R C09 C14 C 0 1 Y N N 82.983 144.754 16.836 1.623 2.417 0.359 C09 H5R 14 H5R C11 C15 C 0 1 Y N N 83.146 140.957 15.170 2.153 -1.638 -0.444 C11 H5R 15 H5R C12 C16 C 0 1 Y N N 83.102 142.239 15.727 1.931 -0.275 -0.189 C12 H5R 16 H5R C14 C17 C 0 1 Y N N 84.705 143.065 14.130 4.229 -0.079 0.597 C14 H5R 17 H5R C16 C18 C 0 1 Y N N 83.984 140.736 14.085 3.374 -2.185 -0.175 C16 H5R 18 H5R C18 C19 C 0 1 Y N N 82.283 142.474 16.800 0.677 0.314 -0.448 C18 H5R 19 H5R C23 C20 C 0 1 N N N 78.002 140.102 13.512 -4.948 -2.072 -0.840 C23 H5R 20 H5R C25 C21 C 0 1 N N N 78.798 138.193 14.691 -4.468 -3.466 1.084 C25 H5R 21 H5R N10 N1 N 0 1 Y N N 83.812 144.524 15.773 2.792 1.818 0.588 N10 H5R 22 H5R N24 N2 N 0 1 N N N 77.632 138.802 14.034 -5.460 -2.604 0.430 N24 H5R 23 H5R O02 O1 O 0 1 N N N 84.067 139.462 13.489 3.588 -3.506 -0.418 O02 H5R 24 H5R O03 O2 O 0 1 N N N 80.452 145.534 20.135 -2.000 4.301 -0.339 O03 H5R 25 H5R S19 S1 S 0 1 N N N 81.251 141.113 17.482 -0.657 -0.634 -1.100 S19 H5R 26 H5R H1 H1 H 0 1 N N N 85.401 141.600 12.716 5.369 -1.855 0.549 H1 H5R 27 H5R H2 H2 H 0 1 N N N 84.654 138.520 11.755 5.633 -3.487 -0.714 H2 H5R 28 H5R H3 H3 H 0 1 N N N 83.964 140.167 11.558 5.100 -3.877 0.940 H3 H5R 29 H5R H4 H4 H 0 1 N N N 85.617 139.960 12.229 4.923 -5.081 -0.360 H4 H5R 30 H5R H5 H5 H 0 1 N N N 79.425 142.421 16.562 -1.739 -0.337 1.026 H5 H5R 31 H5R H6 H6 H 0 1 N N N 78.826 141.004 17.490 -0.702 -1.784 1.010 H6 H5R 32 H5R H7 H7 H 0 1 N N N 80.412 140.658 14.896 -2.342 -2.880 -0.549 H7 H5R 33 H5R H8 H8 H 0 1 N N N 78.535 142.065 14.261 -3.979 -0.379 0.075 H8 H5R 34 H5R H9 H9 H 0 1 N N N 77.410 141.145 15.317 -3.321 -0.831 -1.516 H9 H5R 35 H5R H10 H10 H 0 1 N N N 78.554 139.036 16.687 -2.473 -3.293 1.880 H10 H5R 36 H5R H11 H11 H 0 1 N N N 80.257 138.690 16.234 -3.476 -1.837 2.088 H11 H5R 37 H5R H12 H12 H 0 1 N N N 79.105 144.826 21.502 -3.060 6.072 -0.248 H12 H5R 38 H5R H13 H13 H 0 1 N N N 79.047 144.072 19.873 -1.852 5.834 1.037 H13 H5R 39 H5R H14 H14 H 0 1 N N N 80.393 143.681 20.997 -1.326 6.234 -0.615 H14 H5R 40 H5R H15 H15 H 0 1 N N N 80.746 143.141 18.847 -1.538 1.792 -0.798 H15 H5R 41 H5R H16 H16 H 0 1 N N N 82.022 147.266 18.926 0.147 5.442 0.620 H16 H5R 42 H5R H17 H17 H 0 1 N N N 83.517 146.845 16.998 2.284 4.362 1.038 H17 H5R 43 H5R H18 H18 H 0 1 N N N 82.543 140.158 15.574 1.360 -2.252 -0.845 H18 H5R 44 H5R H19 H19 H 0 1 N N N 85.301 143.871 13.727 5.041 0.511 0.997 H19 H5R 45 H5R H20 H20 H 0 1 N N N 78.901 140.000 12.886 -5.717 -1.463 -1.315 H20 H5R 46 H5R H21 H21 H 0 1 N N N 77.175 140.499 12.904 -4.681 -2.899 -1.498 H21 H5R 47 H5R H22 H22 H 0 1 N N N 78.518 137.202 15.078 -4.203 -4.286 0.416 H22 H5R 48 H5R H23 H23 H 0 1 N N N 79.610 138.083 13.957 -4.888 -3.869 2.005 H23 H5R 49 H5R H24 H24 H 0 1 N N N 76.891 138.907 14.698 -5.751 -1.857 1.043 H24 H5R 50 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal H5R C17 O02 SING N N 1 H5R O02 C16 SING N N 2 H5R C23 N24 SING N N 3 H5R C23 C22 SING N N 4 H5R C15 C16 SING Y N 5 H5R C15 C14 DOUB Y N 6 H5R N24 C25 SING N N 7 H5R C16 C11 DOUB Y N 8 H5R C14 C13 SING Y N 9 H5R C22 C21 SING N N 10 H5R C25 C26 SING N N 11 H5R C11 C12 SING Y N 12 H5R C13 C12 DOUB Y N 13 H5R C13 N10 SING Y N 14 H5R C21 C26 SING N N 15 H5R C21 C20 SING N N 16 H5R C12 C18 SING Y N 17 H5R N10 C09 DOUB Y N 18 H5R C20 S19 SING N N 19 H5R C18 C08 DOUB Y N 20 H5R C18 S19 SING N N 21 H5R C09 C08 SING Y N 22 H5R C09 C07 SING Y N 23 H5R C08 C04 SING Y N 24 H5R C07 C06 DOUB Y N 25 H5R C04 C05 DOUB Y N 26 H5R C06 C05 SING Y N 27 H5R C05 O03 SING N N 28 H5R O03 C01 SING N N 29 H5R C15 H1 SING N N 30 H5R C17 H2 SING N N 31 H5R C17 H3 SING N N 32 H5R C17 H4 SING N N 33 H5R C20 H5 SING N N 34 H5R C20 H6 SING N N 35 H5R C21 H7 SING N N 36 H5R C22 H8 SING N N 37 H5R C22 H9 SING N N 38 H5R C26 H10 SING N N 39 H5R C26 H11 SING N N 40 H5R C01 H12 SING N N 41 H5R C01 H13 SING N N 42 H5R C01 H14 SING N N 43 H5R C04 H15 SING N N 44 H5R C06 H16 SING N N 45 H5R C07 H17 SING N N 46 H5R C11 H18 SING N N 47 H5R C14 H19 SING N N 48 H5R C23 H20 SING N N 49 H5R C23 H21 SING N N 50 H5R C25 H22 SING N N 51 H5R C25 H23 SING N N 52 H5R N24 H24 SING N N 53 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor H5R InChI InChI 1.03 "InChI=1S/C21H24N2O2S/c1-24-15-3-5-19-17(11-15)21(26-13-14-7-9-22-10-8-14)18-12-16(25-2)4-6-20(18)23-19/h3-6,11-12,14,22H,7-10,13H2,1-2H3" H5R InChIKey InChI 1.03 KSMWPFBVZBOUFS-UHFFFAOYSA-N H5R SMILES_CANONICAL CACTVS 3.385 "COc1ccc2nc3ccc(OC)cc3c(SCC4CCNCC4)c2c1" H5R SMILES CACTVS 3.385 "COc1ccc2nc3ccc(OC)cc3c(SCC4CCNCC4)c2c1" H5R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc2c(c1)c(c3cc(ccc3n2)OC)SCC4CCNCC4" H5R SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc2c(c1)c(c3cc(ccc3n2)OC)SCC4CCNCC4" # _pdbx_chem_comp_identifier.comp_id H5R _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2,7-dimethoxy-9-(piperidin-4-ylmethylsulfanyl)acridine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site H5R "Create component" 2020-11-16 PDBJ H5R "Initial release" 2021-11-10 RCSB ##