data_H6O # _chem_comp.id H6O _chem_comp.name "(2S)-4-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)butane-1,2-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H28 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-01-03 _chem_comp.pdbx_modified_date 2022-02-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 376.450 _chem_comp.one_letter_code ? _chem_comp.three_letter_code H6O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5SCW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal H6O C10 C1 C 0 1 Y N N -5.422 1.477 -14.963 4.032 -0.455 0.113 C10 H6O 1 H6O C13 C2 C 0 1 N N N -4.595 -1.261 -12.654 0.391 0.041 -0.158 C13 H6O 2 H6O C17 C3 C 0 1 Y N N -2.298 -3.256 -15.868 -2.500 3.064 0.419 C17 H6O 3 H6O C20 C4 C 0 1 Y N N 0.095 -1.976 -16.213 -5.142 2.475 -0.160 C20 H6O 4 H6O C21 C5 C 0 1 Y N N -0.689 -1.651 -15.123 -4.167 1.514 -0.346 C21 H6O 5 H6O C22 C6 C 0 1 N N N -0.263 -0.602 -14.130 -4.543 0.147 -0.858 C22 H6O 6 H6O C24 C7 C 0 1 N N S 1.646 -0.588 -12.512 -5.120 -2.191 -0.195 C24 H6O 7 H6O C26 C8 C 0 1 N N N 2.810 -1.558 -12.589 -5.194 -3.172 0.977 C26 H6O 8 H6O C01 C9 C 0 1 N N N -2.174 1.484 -16.429 4.319 -1.271 -3.082 C01 H6O 9 H6O C02 C10 C 0 1 N N N -3.564 0.815 -16.540 4.232 0.061 -2.335 C02 H6O 10 H6O C03 C11 C 0 1 Y N N -4.618 1.762 -16.032 4.829 -0.095 -0.960 C03 H6O 11 H6O N04 N1 N 0 1 Y N N -4.690 2.930 -16.663 6.124 0.112 -0.764 N04 H6O 12 H6O C05 C12 C 0 1 Y N N -5.588 3.818 -16.256 6.660 -0.021 0.439 C05 H6O 13 H6O N06 N2 N 0 1 N N N -5.678 4.989 -16.907 8.018 0.205 0.601 N06 H6O 14 H6O N07 N3 N 0 1 Y N N -6.423 3.616 -15.236 5.933 -0.363 1.492 N07 H6O 15 H6O C08 C13 C 0 1 Y N N -6.346 2.473 -14.579 4.629 -0.588 1.372 C08 H6O 16 H6O N09 N4 N 0 1 N N N -7.194 2.301 -13.550 3.871 -0.947 2.477 N09 H6O 17 H6O O11 O1 O 0 1 N N N -5.367 0.271 -14.276 2.697 -0.670 -0.052 O11 H6O 18 H6O C12 C14 C 0 1 N N N -4.500 0.196 -13.102 1.827 0.438 0.188 C12 H6O 19 H6O C14 C15 C 0 1 N N N -4.061 -2.217 -13.727 -0.541 1.228 0.099 C14 H6O 20 H6O O15 O2 O 0 1 N N N -2.658 -1.932 -13.848 -1.883 0.858 -0.224 O15 H6O 21 H6O C16 C16 C 0 1 Y N N -1.901 -2.304 -14.958 -2.843 1.805 -0.052 C16 H6O 22 H6O C18 C17 C 0 1 Y N N -1.501 -3.582 -16.956 -3.477 4.023 0.598 C18 H6O 23 H6O C19 C18 C 0 1 Y N N -0.299 -2.935 -17.133 -4.797 3.729 0.309 C19 H6O 24 H6O C23 C19 C 0 1 N N N 0.352 -1.277 -12.897 -4.738 -0.804 0.324 C23 H6O 25 H6O O25 O3 O 0 1 N N N 1.874 0.461 -13.478 -6.393 -2.125 -0.841 O25 H6O 26 H6O O27 O4 O 0 1 N N N 3.047 -1.973 -11.231 -5.436 -4.490 0.481 O27 H6O 27 H6O H132 H1 H 0 0 N N N -4.005 -1.391 -11.735 0.335 -0.244 -1.208 H132 H6O 28 H6O H131 H2 H 0 0 N N N -5.648 -1.504 -12.451 0.086 -0.800 0.464 H131 H6O 29 H6O H171 H3 H 0 0 N N N -3.245 -3.758 -15.734 -1.469 3.293 0.648 H171 H6O 30 H6O H201 H4 H 0 0 N N N 1.039 -1.470 -16.352 -6.173 2.247 -0.385 H201 H6O 31 H6O H221 H5 H 0 0 N N N 0.483 0.060 -14.595 -5.470 0.215 -1.427 H221 H6O 32 H6O H222 H6 H 0 0 N N N -1.139 -0.011 -13.825 -3.749 -0.231 -1.501 H222 H6O 33 H6O H241 H7 H 0 0 N N N 1.565 -0.177 -11.495 -4.369 -2.532 -0.908 H241 H6O 34 H6O H261 H8 H 0 0 N N N 2.550 -2.423 -13.217 -4.251 -3.157 1.523 H261 H6O 35 H6O H262 H9 H 0 0 N N N 3.700 -1.060 -13.001 -6.005 -2.881 1.644 H262 H6O 36 H6O H012 H10 H 0 0 N N N -1.403 0.793 -16.800 3.704 -2.014 -2.574 H012 H6O 37 H6O H011 H11 H 0 0 N N N -2.161 2.405 -17.031 3.960 -1.139 -4.103 H011 H6O 38 H6O H013 H12 H 0 0 N N N -1.969 1.731 -15.377 5.355 -1.609 -3.103 H013 H6O 39 H6O H021 H13 H 0 0 N N N -3.769 0.568 -17.592 4.782 0.823 -2.886 H021 H6O 40 H6O H022 H14 H 0 0 N N N -3.577 -0.106 -15.938 3.188 0.360 -2.246 H022 H6O 41 H6O H062 H15 H 0 0 N N N -5.008 5.011 -17.649 8.562 0.457 -0.161 H062 H6O 42 H6O H061 H16 H 0 0 N N N -6.598 5.090 -17.286 8.424 0.111 1.477 H061 H6O 43 H6O H092 H17 H 0 0 N N N -7.770 3.113 -13.453 2.920 -1.108 2.381 H092 H6O 44 H6O H091 H18 H 0 0 N N N -7.770 1.502 -13.723 4.293 -1.036 3.346 H091 H6O 45 H6O H121 H19 H 0 0 N N N -3.464 0.456 -13.366 2.132 1.280 -0.434 H121 H6O 46 H6O H122 H20 H 0 0 N N N -4.857 0.871 -12.310 1.883 0.723 1.238 H122 H6O 47 H6O H142 H21 H 0 0 N N N -4.214 -3.262 -13.418 -0.486 1.513 1.149 H142 H6O 48 H6O H141 H22 H 0 0 N N N -4.571 -2.039 -14.685 -0.237 2.070 -0.523 H141 H6O 49 H6O H181 H23 H 0 0 N N N -1.821 -4.337 -17.658 -3.211 5.003 0.965 H181 H6O 50 H6O H191 H24 H 0 0 N N N 0.330 -3.172 -17.979 -5.561 4.479 0.454 H191 H6O 51 H6O H232 H25 H 0 0 N N N -0.356 -1.214 -12.058 -3.811 -0.872 0.893 H232 H6O 52 H6O H231 H26 H 0 0 N N N 0.557 -2.333 -13.126 -5.533 -0.426 0.968 H231 H6O 53 H6O H251 H27 H 0 0 N N N 2.681 0.917 -13.267 -7.111 -1.828 -0.265 H251 H6O 54 H6O H271 H28 H 0 0 N N N 3.771 -2.588 -11.209 -5.494 -5.166 1.170 H271 H6O 55 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal H6O C02 C01 SING N N 1 H6O C03 C02 SING N N 2 H6O N04 C03 DOUB Y N 3 H6O C05 N04 SING Y N 4 H6O N06 C05 SING N N 5 H6O N07 C05 DOUB Y N 6 H6O C08 N07 SING Y N 7 H6O N09 C08 SING N N 8 H6O C10 C08 DOUB Y N 9 H6O O11 C10 SING N N 10 H6O C12 O11 SING N N 11 H6O C13 C12 SING N N 12 H6O C14 C13 SING N N 13 H6O O15 C14 SING N N 14 H6O C16 O15 SING N N 15 H6O C17 C16 DOUB Y N 16 H6O C18 C17 SING Y N 17 H6O C19 C18 DOUB Y N 18 H6O C20 C19 SING Y N 19 H6O C21 C20 DOUB Y N 20 H6O C22 C21 SING N N 21 H6O C23 C22 SING N N 22 H6O C24 C23 SING N N 23 H6O O25 C24 SING N N 24 H6O C26 C24 SING N N 25 H6O O27 C26 SING N N 26 H6O C03 C10 SING Y N 27 H6O C16 C21 SING Y N 28 H6O C13 H132 SING N N 29 H6O C13 H131 SING N N 30 H6O C17 H171 SING N N 31 H6O C20 H201 SING N N 32 H6O C22 H221 SING N N 33 H6O C22 H222 SING N N 34 H6O C24 H241 SING N N 35 H6O C26 H261 SING N N 36 H6O C26 H262 SING N N 37 H6O C01 H012 SING N N 38 H6O C01 H011 SING N N 39 H6O C01 H013 SING N N 40 H6O C02 H021 SING N N 41 H6O C02 H022 SING N N 42 H6O N06 H062 SING N N 43 H6O N06 H061 SING N N 44 H6O N09 H092 SING N N 45 H6O N09 H091 SING N N 46 H6O C12 H121 SING N N 47 H6O C12 H122 SING N N 48 H6O C14 H142 SING N N 49 H6O C14 H141 SING N N 50 H6O C18 H181 SING N N 51 H6O C19 H191 SING N N 52 H6O C23 H232 SING N N 53 H6O C23 H231 SING N N 54 H6O O25 H251 SING N N 55 H6O O27 H271 SING N N 56 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor H6O SMILES ACDLabs 12.01 "CCc1nc(N)nc(N)c1OCCCOc1ccccc1CCC(O)CO" H6O InChI InChI 1.03 "InChI=1S/C19H28N4O4/c1-2-15-17(18(20)23-19(21)22-15)27-11-5-10-26-16-7-4-3-6-13(16)8-9-14(25)12-24/h3-4,6-7,14,24-25H,2,5,8-12H2,1H3,(H4,20,21,22,23)/t14-/m0/s1" H6O InChIKey InChI 1.03 OLZJTRCFEVMRFD-AWEZNQCLSA-N H6O SMILES_CANONICAL CACTVS 3.385 "CCc1nc(N)nc(N)c1OCCCOc2ccccc2CC[C@H](O)CO" H6O SMILES CACTVS 3.385 "CCc1nc(N)nc(N)c1OCCCOc2ccccc2CC[CH](O)CO" H6O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCc1c(c(nc(n1)N)N)OCCCOc2ccccc2CC[C@@H](CO)O" H6O SMILES "OpenEye OEToolkits" 2.0.7 "CCc1c(c(nc(n1)N)N)OCCCOc2ccccc2CCC(CO)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier H6O "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-4-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)butane-1,2-diol" H6O "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-4-[2-[3-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]oxypropoxy]phenyl]butane-1,2-diol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site H6O "Create component" 2022-01-03 RCSB H6O "Initial release" 2022-02-09 RCSB ##