data_H93 # _chem_comp.id H93 _chem_comp.name "2-azanyl-9-[(2R,3R,4S,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1-methyl-purin-6-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H15 N5 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-30 _chem_comp.pdbx_modified_date 2022-01-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 297.267 _chem_comp.one_letter_code ? _chem_comp.three_letter_code H93 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7DLC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal H93 C01 C1 C 0 1 N N N -11.943 52.621 1.165 5.308 0.394 0.138 C01 H93 1 H93 C03 C2 C 0 1 N N N -11.363 51.957 3.384 3.375 -1.046 -0.224 C03 H93 2 H93 C05 C3 C 0 1 Y N N -10.405 51.341 4.407 1.973 -1.234 -0.217 C05 H93 3 H93 C06 C4 C 0 1 Y N N -9.186 50.882 3.965 1.154 -0.158 0.146 C06 H93 4 H93 C08 C5 C 0 1 N N N -9.689 51.540 1.550 3.012 1.175 0.471 C08 H93 5 H93 C11 C6 C 0 1 Y N N -9.316 50.546 6.129 -0.079 -1.921 -0.333 C11 H93 6 H93 C13 C7 C 0 1 N N R -7.230 49.873 4.977 -1.346 0.152 0.353 C13 H93 7 H93 C14 C8 C 0 1 N N R -7.160 48.235 4.753 -1.821 0.916 -0.910 C14 H93 8 H93 C15 C9 C 0 1 N N S -5.940 48.117 4.475 -3.332 1.101 -0.628 C15 H93 9 H93 C16 C10 C 0 1 N N R -5.621 49.316 3.483 -3.657 0.015 0.415 C16 H93 10 H93 C18 C11 C 0 1 N N N -5.990 49.019 2.193 -4.747 -0.916 -0.119 C18 H93 11 H93 N02 N1 N 0 1 N N N -10.972 52.024 2.024 3.861 0.165 0.127 N02 H93 12 H93 N07 N2 N 0 1 N N N -8.773 50.959 2.526 1.708 1.014 0.476 N07 H93 13 H93 N09 N3 N 0 1 N N N -9.287 51.625 0.150 3.535 2.394 0.824 N09 H93 14 H93 N10 N4 N 0 1 Y N N -8.542 50.397 5.024 -0.133 -0.617 0.064 N10 H93 15 H93 N12 N5 N 0 1 Y N N -10.486 51.133 5.744 1.160 -2.281 -0.498 N12 H93 16 H93 O04 O1 O 0 1 N N N -12.437 52.381 3.676 4.126 -1.955 -0.533 O04 H93 17 H93 O17 O2 O 0 1 N N N -6.548 50.422 4.016 -2.449 -0.731 0.650 O17 H93 18 H93 O19 O3 O 0 1 N N N -5.327 49.856 1.281 -5.113 -1.853 0.896 O19 H93 19 H93 O20 O4 O 0 1 N N N -5.157 48.370 5.724 -3.585 2.401 -0.092 O20 H93 20 H93 O21 O5 O 0 1 N N N -7.443 47.652 6.057 -1.164 2.181 -1.017 O21 H93 21 H93 H1 H1 H 0 1 N N N -12.828 52.905 1.753 5.611 0.759 1.120 H1 H93 22 H93 H2 H2 H 0 1 N N N -11.513 53.517 0.693 5.826 -0.541 -0.077 H2 H93 23 H93 H3 H3 H 0 1 N N N -12.236 51.901 0.387 5.565 1.134 -0.620 H3 H93 24 H93 H4 H4 H 0 1 N N N -9.053 50.252 7.134 -0.937 -2.559 -0.488 H4 H93 25 H93 H5 H5 H 0 1 N N N -6.743 50.063 5.945 -1.174 0.844 1.178 H5 H93 26 H93 H6 H6 H 0 1 N N N -7.879 47.928 3.979 -1.662 0.320 -1.808 H6 H93 27 H93 H7 H7 H 0 1 N N N -5.651 47.162 4.012 -3.911 0.945 -1.538 H7 H93 28 H93 H8 H8 H 0 1 N N N -4.566 49.613 3.577 -3.989 0.484 1.342 H8 H93 29 H93 H9 H9 H 0 1 N N N -7.076 49.158 2.087 -5.620 -0.328 -0.402 H9 H93 30 H93 H10 H10 H 0 1 N N N -5.732 47.972 1.976 -4.372 -1.452 -0.991 H10 H93 31 H93 H11 H11 H 0 1 N N N -8.390 51.287 -0.134 4.488 2.554 0.745 H11 H93 32 H93 H12 H12 H 0 1 N N N -9.909 52.022 -0.525 2.951 3.095 1.152 H12 H93 33 H93 H13 H13 H 0 1 N N N -5.594 49.636 0.396 -5.801 -2.477 0.626 H13 H93 34 H93 H14 H14 H 0 1 N N N -5.320 47.672 6.347 -4.517 2.571 0.103 H14 H93 35 H93 H15 H15 H 0 1 N N N -8.367 47.748 6.254 -1.428 2.697 -1.791 H15 H93 36 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal H93 N09 C08 SING N N 1 H93 C01 N02 SING N N 2 H93 O19 C18 SING N N 3 H93 C08 N02 SING N N 4 H93 C08 N07 DOUB N N 5 H93 N02 C03 SING N N 6 H93 C18 C16 SING N N 7 H93 N07 C06 SING N N 8 H93 C03 O04 DOUB N N 9 H93 C03 C05 SING N N 10 H93 C16 O17 SING N N 11 H93 C16 C15 SING N N 12 H93 C06 C05 DOUB Y N 13 H93 C06 N10 SING Y N 14 H93 O17 C13 SING N N 15 H93 C05 N12 SING Y N 16 H93 C15 C14 SING N N 17 H93 C15 O20 SING N N 18 H93 C14 C13 SING N N 19 H93 C14 O21 SING N N 20 H93 C13 N10 SING N N 21 H93 N10 C11 SING Y N 22 H93 N12 C11 DOUB Y N 23 H93 C01 H1 SING N N 24 H93 C01 H2 SING N N 25 H93 C01 H3 SING N N 26 H93 C11 H4 SING N N 27 H93 C13 H5 SING N N 28 H93 C14 H6 SING N N 29 H93 C15 H7 SING N N 30 H93 C16 H8 SING N N 31 H93 C18 H9 SING N N 32 H93 C18 H10 SING N N 33 H93 N09 H11 SING N N 34 H93 N09 H12 SING N N 35 H93 O19 H13 SING N N 36 H93 O20 H14 SING N N 37 H93 O21 H15 SING N N 38 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor H93 InChI InChI 1.03 "InChI=1S/C11H15N5O5/c1-15-9(20)5-8(14-11(15)12)16(3-13-5)10-7(19)6(18)4(2-17)21-10/h3-4,6-7,10,17-19H,2H2,1H3,(H2,12,14)/t4-,6-,7-,10-/m1/s1" H93 InChIKey InChI 1.03 UTAIYTHAJQNQDW-KQYNXXCUSA-N H93 SMILES_CANONICAL CACTVS 3.385 "CN1C(=Nc2n(cnc2C1=O)[C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)N" H93 SMILES CACTVS 3.385 "CN1C(=Nc2n(cnc2C1=O)[CH]3O[CH](CO)[CH](O)[CH]3O)N" H93 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1C(=O)c2c(n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)N=C1N" H93 SMILES "OpenEye OEToolkits" 2.0.7 "CN1C(=O)c2c(n(cn2)C3C(C(C(O3)CO)O)O)N=C1N" # _pdbx_chem_comp_identifier.comp_id H93 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1-methyl-purin-6-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site H93 "Create component" 2020-11-30 PDBJ H93 "Initial release" 2022-02-02 RCSB ##