data_HE8 # _chem_comp.id HE8 _chem_comp.name "3-[(3~{S},4~{R})-4-azanyl-4-carboxy-pyrrolidin-3-yl]propyl-tris(oxidanyl)boranuide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H18 B N2 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge -1 _chem_comp.pdbx_initial_date 2018-12-04 _chem_comp.pdbx_modified_date 2019-08-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 233.050 _chem_comp.one_letter_code ? _chem_comp.three_letter_code HE8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6Q37 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal HE8 C11 C1 C 0 1 N N N 35.621 85.832 71.543 -1.182 1.980 -0.265 C11 HE8 1 HE8 C13 C2 C 0 1 N N N 33.994 88.658 71.491 -2.451 -1.294 -0.357 C13 HE8 2 HE8 O14 O1 O 0 1 N N N 35.020 88.936 72.169 -2.315 -2.418 0.365 O14 HE8 3 HE8 O15 O2 O 0 1 N N N 33.273 89.539 70.949 -2.495 -1.353 -1.563 O15 HE8 4 HE8 B6 B1 B -1 1 N N N 37.366 86.681 66.107 3.826 -0.060 -0.006 B6 HE8 5 HE8 C1 C3 C 0 1 N N R 33.610 87.200 71.343 -2.550 0.039 0.337 C1 HE8 6 HE8 C2 C4 C 0 1 N N S 34.663 86.442 70.516 -1.147 0.652 0.522 C2 HE8 7 HE8 C3 C5 C 0 1 N N N 35.429 87.269 69.481 -0.080 -0.279 -0.055 C3 HE8 8 HE8 C4 C6 C 0 1 N N N 36.204 86.422 68.454 1.309 0.284 0.252 C4 HE8 9 HE8 C5 C7 C 0 1 N N N 37.009 87.336 67.513 2.377 -0.648 -0.326 C5 HE8 10 HE8 C9 C8 C 0 1 N N N 33.625 86.569 72.750 -3.316 1.048 -0.546 C9 HE8 11 HE8 N10 N1 N 0 1 N N N 34.833 85.765 72.770 -2.622 2.343 -0.323 N10 HE8 12 HE8 N12 N2 N 0 1 N N N 32.266 87.047 70.745 -3.219 -0.111 1.636 N12 HE8 13 HE8 O16 O3 O 0 1 N N N 36.328 85.825 65.430 3.950 1.179 -0.570 O16 HE8 14 HE8 O7 O4 O 0 1 N N N 38.433 85.625 66.513 3.990 0.037 1.348 O7 HE8 15 HE8 O8 O5 O 0 1 N N N 38.135 87.552 65.136 4.780 -0.892 -0.521 O8 HE8 16 HE8 H1 H1 H 0 1 N N N 35.941 84.827 71.229 -0.617 2.749 0.262 H1 HE8 17 HE8 H2 H2 H 0 1 N N N 36.505 86.472 71.681 -0.785 1.839 -1.270 H2 HE8 18 HE8 H3 H3 H 0 1 N N N 35.139 89.878 72.192 -2.256 -3.250 -0.125 H3 HE8 19 HE8 H4 H4 H 0 1 N N N 34.156 85.620 69.990 -0.953 0.843 1.578 H4 HE8 20 HE8 H5 H5 H 0 1 N N N 36.147 87.910 70.013 -0.178 -1.268 0.394 H5 HE8 21 HE8 H6 H6 H 0 1 N N N 34.708 87.898 68.938 -0.210 -0.357 -1.135 H6 HE8 22 HE8 H7 H7 H 0 1 N N N 35.493 85.827 67.862 1.408 1.272 -0.198 H7 HE8 23 HE8 H8 H8 H 0 1 N N N 36.893 85.748 68.984 1.440 0.361 1.331 H8 HE8 24 HE8 H9 H9 H 0 1 N N N 37.950 87.605 68.016 2.246 -0.725 -1.405 H9 HE8 25 HE8 H10 H10 H 0 1 N N N 36.419 88.246 67.329 2.278 -1.636 0.124 H10 HE8 26 HE8 H11 H11 H 0 1 N N N 33.662 87.348 73.526 -3.253 0.759 -1.595 H11 HE8 27 HE8 H12 H12 H 0 1 N N N 32.736 85.940 72.904 -4.357 1.116 -0.231 H12 HE8 28 HE8 H13 H13 H 0 1 N N N 34.572 84.812 72.923 -2.922 2.770 0.540 H13 HE8 29 HE8 H15 H15 H 0 1 N N N 31.597 87.546 71.296 -4.148 -0.489 1.524 H15 HE8 30 HE8 H16 H16 H 0 1 N N N 32.272 87.414 69.815 -2.670 -0.681 2.262 H16 HE8 31 HE8 H18 H18 H 0 1 N N N 35.876 85.300 66.081 3.845 1.186 -1.531 H18 HE8 32 HE8 H19 H19 H 0 1 N N N 38.054 85.013 67.133 3.915 -0.806 1.815 H19 HE8 33 HE8 H14 H14 H 0 1 N N N 38.774 88.069 65.612 5.687 -0.597 -0.364 H14 HE8 34 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal HE8 O8 B6 SING N N 1 HE8 O16 B6 SING N N 2 HE8 B6 O7 SING N N 3 HE8 B6 C5 SING N N 4 HE8 C5 C4 SING N N 5 HE8 C4 C3 SING N N 6 HE8 C3 C2 SING N N 7 HE8 C2 C1 SING N N 8 HE8 C2 C11 SING N N 9 HE8 N12 C1 SING N N 10 HE8 O15 C13 DOUB N N 11 HE8 C1 C13 SING N N 12 HE8 C1 C9 SING N N 13 HE8 C13 O14 SING N N 14 HE8 C11 N10 SING N N 15 HE8 C9 N10 SING N N 16 HE8 C11 H1 SING N N 17 HE8 C11 H2 SING N N 18 HE8 O14 H3 SING N N 19 HE8 C2 H4 SING N N 20 HE8 C3 H5 SING N N 21 HE8 C3 H6 SING N N 22 HE8 C4 H7 SING N N 23 HE8 C4 H8 SING N N 24 HE8 C5 H9 SING N N 25 HE8 C5 H10 SING N N 26 HE8 C9 H11 SING N N 27 HE8 C9 H12 SING N N 28 HE8 N10 H13 SING N N 29 HE8 N12 H15 SING N N 30 HE8 N12 H16 SING N N 31 HE8 O16 H18 SING N N 32 HE8 O7 H19 SING N N 33 HE8 O8 H14 SING N N 34 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor HE8 InChI InChI 1.03 "InChI=1S/C8H18BN2O5/c10-8(7(12)13)5-11-4-6(8)2-1-3-9(14,15)16/h6,11,14-16H,1-5,10H2,(H,12,13)/q-1/t6-,8-/m0/s1" HE8 InChIKey InChI 1.03 JNNZQSJBRFVUJB-XPUUQOCRSA-N HE8 SMILES_CANONICAL CACTVS 3.385 "N[C@]1(CNC[C@@H]1CCC[B-](O)(O)O)C(O)=O" HE8 SMILES CACTVS 3.385 "N[C]1(CNC[CH]1CCC[B-](O)(O)O)C(O)=O" HE8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "[B-](CCC[C@H]1CNC[C@]1(C(=O)O)N)(O)(O)O" HE8 SMILES "OpenEye OEToolkits" 2.0.6 "[B-](CCCC1CNCC1(C(=O)O)N)(O)(O)O" # _pdbx_chem_comp_identifier.comp_id HE8 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "3-[(3~{S},4~{R})-4-azanyl-4-carboxy-pyrrolidin-3-yl]propyl-tris(oxidanyl)boranuide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site HE8 "Create component" 2018-12-04 EBI HE8 "Initial release" 2019-08-28 RCSB ##