data_HF8 # _chem_comp.id HF8 _chem_comp.name "[(1~{S},2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-3,4,5,6-tetrakis(oxidanyl)cyclohexyl] hydrogen sulfate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H14 O9 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-12-04 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 274.246 _chem_comp.one_letter_code ? _chem_comp.three_letter_code HF8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6IBM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal HF8 C1 C1 C 0 1 N N S N N N 59.756 -15.843 -39.108 -2.694 0.372 0.365 C1 HF8 1 HF8 C2 C2 C 0 1 N N S N N N 59.735 -14.493 -39.821 -2.153 -0.990 -0.077 C2 HF8 2 HF8 C3 C3 C 0 1 N N R N N N 61.089 -14.197 -40.480 -0.787 -1.230 0.568 C3 HF8 3 HF8 C4 C4 C 0 1 N N S N N N 62.257 -14.910 -39.806 0.183 -0.130 0.132 C4 HF8 4 HF8 C5 C5 C 0 1 N N S N N N 62.082 -15.115 -38.309 -0.357 1.232 0.574 C5 HF8 5 HF8 C7 C6 C 0 1 N N R N N N 60.735 -15.764 -37.926 -1.724 1.472 -0.070 C7 HF8 6 HF8 C8 C7 C 0 1 N N N N N N 61.327 -12.696 -40.551 -0.246 -2.591 0.125 C8 HF8 7 HF8 O9 O1 O 0 1 N N N N N N 62.551 -12.411 -41.245 -1.091 -3.626 0.632 O9 HF8 8 HF8 O10 O2 O 0 1 N N N N N N 62.429 -16.227 -40.277 1.459 -0.354 0.734 O10 HF8 9 HF8 O11 O3 O 0 1 N N N N N N 59.342 -13.479 -38.888 -2.019 -1.009 -1.500 O11 HF8 10 HF8 O12 O4 O 0 1 N N N N N N 58.431 -16.157 -38.673 -3.970 0.596 -0.237 O12 HF8 11 HF8 O13 O5 O 0 1 N N N N N N 61.008 -17.066 -37.378 -2.229 2.743 0.343 O13 HF8 12 HF8 S15 S1 S 0 1 N N N N N N 63.439 -16.567 -41.386 2.637 0.040 -0.146 S15 HF8 13 HF8 O18 O6 O 0 1 N N N N N N 63.381 -18.033 -41.459 3.805 -0.430 0.512 O18 HF8 14 HF8 O19 O7 O 0 1 N N N N N N 62.977 -15.929 -42.613 2.289 -0.334 -1.472 O19 HF8 15 HF8 O1 O8 O 0 1 N N N N N N 64.796 -16.144 -40.994 2.719 1.559 -0.136 O1 HF8 16 HF8 O2 O9 O 0 1 N Y N N N N 62.221 -13.837 -37.687 0.548 2.259 0.167 O2 HF8 17 HF8 H1 H1 H 0 1 N N N N N N 60.115 -16.609 -39.811 -2.796 0.387 1.451 H1 HF8 18 HF8 H2 H2 H 0 1 N N N N N N 58.982 -14.550 -40.621 -2.844 -1.773 0.233 H2 HF8 19 HF8 H3 H3 H 0 1 N N N N N N 61.034 -14.568 -41.514 -0.889 -1.215 1.653 H3 HF8 20 HF8 H4 H4 H 0 1 N N N N N N 63.172 -14.323 -39.976 0.286 -0.145 -0.953 H4 HF8 21 HF8 H5 H5 H 0 1 N N N N N N 62.886 -15.779 -37.959 -0.460 1.247 1.659 H5 HF8 22 HF8 H6 H6 H 0 1 N N N N N N 60.272 -15.138 -37.149 -1.622 1.457 -1.156 H6 HF8 23 HF8 H7 H7 H 0 1 N N N N N N 61.387 -12.291 -39.530 -0.227 -2.638 -0.964 H7 HF8 24 HF8 H8 H8 H 0 1 N N N N N N 60.490 -12.222 -41.085 0.764 -2.724 0.512 H8 HF8 25 HF8 H9 H9 H 0 1 N N N N N N 62.684 -11.471 -41.280 -0.807 -4.519 0.390 H9 HF8 26 HF8 H10 H10 H 0 1 N N N N N N 58.501 -13.706 -38.508 -2.848 -0.863 -1.975 H10 HF8 27 HF8 H11 H11 H 0 1 N N N N N N 58.434 -16.996 -38.228 -4.374 1.442 0.000 H11 HF8 28 HF8 H12 H12 H 0 1 N N N N N N 61.614 -16.983 -36.651 -3.094 2.962 -0.029 H12 HF8 29 HF8 H13 H13 H 0 1 N N N N N N 62.117 -13.929 -36.747 0.269 3.151 0.415 H13 HF8 30 HF8 H14 H14 H 0 1 N N N N N N 65.344 -16.910 -40.872 3.441 1.918 -0.670 H14 HF8 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal HF8 O19 S15 DOUB N N 1 HF8 O18 S15 DOUB N N 2 HF8 S15 O1 SING N N 3 HF8 S15 O10 SING N N 4 HF8 O9 C8 SING N N 5 HF8 C8 C3 SING N N 6 HF8 C3 C2 SING N N 7 HF8 C3 C4 SING N N 8 HF8 O10 C4 SING N N 9 HF8 C2 C1 SING N N 10 HF8 C2 O11 SING N N 11 HF8 C4 C5 SING N N 12 HF8 C1 O12 SING N N 13 HF8 C1 C7 SING N N 14 HF8 C5 C7 SING N N 15 HF8 C7 O13 SING N N 16 HF8 C5 O2 SING N N 17 HF8 C1 H1 SING N N 18 HF8 C2 H2 SING N N 19 HF8 C3 H3 SING N N 20 HF8 C4 H4 SING N N 21 HF8 C5 H5 SING N N 22 HF8 C7 H6 SING N N 23 HF8 C8 H7 SING N N 24 HF8 C8 H8 SING N N 25 HF8 O9 H9 SING N N 26 HF8 O11 H10 SING N N 27 HF8 O12 H11 SING N N 28 HF8 O13 H12 SING N N 29 HF8 O2 H13 SING N N 30 HF8 O1 H14 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor HF8 InChI InChI 1.03 "InChI=1S/C7H14O9S/c8-1-2-3(9)4(10)5(11)6(12)7(2)16-17(13,14)15/h2-12H,1H2,(H,13,14,15)/t2-,3+,4+,5-,6+,7+/m1/s1" HF8 InChIKey InChI 1.03 PDBNIRCVRHFXAD-ADTCQYHUSA-N HF8 SMILES_CANONICAL CACTVS 3.385 "OC[C@@H]1[C@H](O)[C@H](O)[C@@H](O)[C@H](O)[C@H]1O[S](O)(=O)=O" HF8 SMILES CACTVS 3.385 "OC[CH]1[CH](O)[CH](O)[CH](O)[CH](O)[CH]1O[S](O)(=O)=O" HF8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H]([C@H]1OS(=O)(=O)O)O)O)O)O)O" HF8 SMILES "OpenEye OEToolkits" 2.0.6 "C(C1C(C(C(C(C1OS(=O)(=O)O)O)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id HF8 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "[(1~{S},2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-3,4,5,6-tetrakis(oxidanyl)cyclohexyl] hydrogen sulfate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site HF8 "Create component" 2018-12-04 EBI HF8 "Other modification" 2018-12-10 EBI HF8 "Initial release" 2019-10-09 RCSB HF8 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id HF8 _pdbx_chem_comp_pcm.modified_residue_id ASP _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C5 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OD2 _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #