data_HH2 # _chem_comp.id HH2 _chem_comp.name 6-HYDROXYMETHYLPTERIN-DIPHOSPHATE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H9 N5 O8 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "[PTERIN-6-YL METHANYL]-PHOSPHONOPHOSPHATE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2000-12-21 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 353.123 _chem_comp.one_letter_code ? _chem_comp.three_letter_code HH2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1AD4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal HH2 N1 N1 N 0 1 Y N N 32.965 8.661 39.902 -0.909 0.033 2.323 N1 HH2 1 HH2 C2 C2 C 0 1 Y N N 32.825 8.638 41.218 -0.077 0.017 1.301 C2 HH2 2 HH2 C3 C3 C 0 1 Y N N 33.833 7.960 42.115 1.297 -0.019 1.511 C3 HH2 3 HH2 N4 N4 N 0 1 Y N N 34.999 7.384 41.413 1.792 -0.037 2.732 N4 HH2 4 HH2 N5 N5 N 0 1 Y N N 36.168 6.953 39.413 1.430 -0.038 5.042 N5 HH2 5 HH2 C6 C6 C 0 1 Y N N 36.296 7.049 38.032 0.623 -0.021 6.074 C6 HH2 6 HH2 N6 N6 N 0 1 N N N 37.461 6.485 37.552 1.170 -0.040 7.331 N6 HH2 7 HH2 N7 N7 N 0 1 Y N N 35.380 7.647 37.264 -0.734 0.007 5.957 N7 HH2 8 HH2 C8 C8 C 0 1 Y N N 34.308 8.172 37.858 -1.316 0.031 4.735 C8 HH2 9 HH2 O8 O8 O 0 1 N N N 33.411 8.830 37.089 -2.527 0.062 4.613 O8 HH2 10 HH2 C9 C9 C 0 1 Y N N 34.103 8.088 39.236 -0.430 0.015 3.559 C9 HH2 11 HH2 C10 C10 C 0 1 Y N N 35.054 7.480 40.041 0.965 -0.021 3.779 C10 HH2 12 HH2 C11 C11 C 0 1 N N N 31.621 9.326 41.797 -0.618 0.038 -0.104 C11 HH2 13 HH2 O4 O4 O 0 1 N N N 31.669 9.282 43.220 0.466 0.014 -1.033 O4 HH2 14 HH2 P1 P1 P 0 1 N N S 30.345 9.353 44.155 -0.181 0.038 -2.507 P1 HH2 15 HH2 O1P O1P O 0 1 N N N 29.576 10.581 43.825 -0.987 1.268 -2.672 O1P HH2 16 HH2 O2P O2P O 0 1 N N N 30.748 9.220 45.580 -1.125 -1.251 -2.699 O2P HH2 17 HH2 O3P O3P O 0 1 N N N 29.473 8.053 43.731 0.991 0.013 -3.609 O3P HH2 18 HH2 P2 P2 P 0 1 N N N 29.934 6.523 43.421 0.275 0.038 -5.051 P2 HH2 19 HH2 O4P O4P O 0 1 N N N 30.257 6.469 41.966 -0.537 1.269 -5.177 O4P HH2 20 HH2 O5P O5P O 0 1 N N N 28.751 5.670 43.764 1.396 0.015 -6.207 O5P HH2 21 HH2 O6P O6P O 0 1 N N N 31.119 6.224 44.285 -0.676 -1.251 -5.200 O6P HH2 22 HH2 H31 1H3 H 0 1 N N N 33.711 7.901 43.186 1.967 -0.032 0.663 H31 HH2 23 HH2 HN61 1HN6 H 0 0 N N N 38.169 6.042 38.102 2.133 -0.066 7.440 HN61 HH2 24 HH2 HN62 2HN6 H 0 0 N N N 37.474 6.596 36.558 0.593 -0.025 8.110 HN62 HH2 25 HH2 HN7 HN7 H 0 1 N N N 35.495 7.699 36.272 -1.287 0.017 6.754 HN7 HH2 26 HH2 H111 1H11 H 0 0 N N N 30.712 8.813 41.451 -1.251 -0.835 -0.263 H111 HH2 27 HH2 H112 2H11 H 0 0 N N N 31.609 10.375 41.467 -1.205 0.944 -0.254 H112 HH2 28 HH2 HOP2 2HOP H 0 0 N N N 31.696 9.192 45.640 -0.563 -2.029 -2.584 HOP2 HH2 29 HH2 HOP5 5HOP H 0 0 N N N 28.750 5.489 44.697 0.926 0.031 -7.052 HOP5 HH2 30 HH2 HOP6 6HOP H 0 0 N N N 31.898 6.161 43.744 -0.108 -2.029 -5.113 HOP6 HH2 31 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal HH2 N1 C2 DOUB Y N 1 HH2 N1 C9 SING Y N 2 HH2 C2 C3 SING Y N 3 HH2 C2 C11 SING N N 4 HH2 C3 N4 DOUB Y N 5 HH2 C3 H31 SING N N 6 HH2 N4 C10 SING Y N 7 HH2 N5 C6 DOUB Y N 8 HH2 N5 C10 SING Y N 9 HH2 C6 N6 SING N N 10 HH2 C6 N7 SING Y N 11 HH2 N6 HN61 SING N N 12 HH2 N6 HN62 SING N N 13 HH2 N7 C8 SING Y N 14 HH2 N7 HN7 SING N N 15 HH2 C8 O8 DOUB N N 16 HH2 C8 C9 SING Y N 17 HH2 C9 C10 DOUB Y N 18 HH2 C11 O4 SING N N 19 HH2 C11 H111 SING N N 20 HH2 C11 H112 SING N N 21 HH2 O4 P1 SING N N 22 HH2 P1 O1P DOUB N N 23 HH2 P1 O2P SING N N 24 HH2 P1 O3P SING N N 25 HH2 O2P HOP2 SING N N 26 HH2 O3P P2 SING N N 27 HH2 P2 O4P DOUB N N 28 HH2 P2 O5P SING N N 29 HH2 P2 O6P SING N N 30 HH2 O5P HOP5 SING N N 31 HH2 O6P HOP6 SING N N 32 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor HH2 SMILES ACDLabs 10.04 "O=P(O)(O)OP(=O)(O)OCc1nc2C(=O)NC(=Nc2nc1)N" HH2 SMILES_CANONICAL CACTVS 3.341 "NC1=Nc2ncc(CO[P@@](O)(=O)O[P](O)(O)=O)nc2C(=O)N1" HH2 SMILES CACTVS 3.341 "NC1=Nc2ncc(CO[P](O)(=O)O[P](O)(O)=O)nc2C(=O)N1" HH2 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1c(nc2c(n1)N=C(NC2=O)N)CO[P@](=O)(O)OP(=O)(O)O" HH2 SMILES "OpenEye OEToolkits" 1.5.0 "c1c(nc2c(n1)N=C(NC2=O)N)COP(=O)(O)OP(=O)(O)O" HH2 InChI InChI 1.03 "InChI=1S/C7H9N5O8P2/c8-7-11-5-4(6(13)12-7)10-3(1-9-5)2-19-22(17,18)20-21(14,15)16/h1H,2H2,(H,17,18)(H2,14,15,16)(H3,8,9,11,12,13)" HH2 InChIKey InChI 1.03 AMDUVUKDRBIVAH-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier HH2 "SYSTEMATIC NAME" ACDLabs 10.04 "(2-amino-4-oxo-3,4-dihydropteridin-6-yl)methyl trihydrogen diphosphate" HH2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2-amino-4-oxo-3H-pteridin-6-yl)methyl phosphono hydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site HH2 "Create component" 2000-12-21 RCSB HH2 "Modify descriptor" 2011-06-04 RCSB HH2 "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id HH2 _pdbx_chem_comp_synonyms.name "[PTERIN-6-YL METHANYL]-PHOSPHONOPHOSPHATE" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##