data_HKT # _chem_comp.id HKT _chem_comp.name "1-[5-(2-fluorophenyl)-1-pyridin-3-ylsulfonyl-pyrrol-3-yl]-~{N}-methyl-methanamine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H16 F N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Vonoprazan _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-10-20 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 345.391 _chem_comp.one_letter_code ? _chem_comp.three_letter_code HKT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5YLU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal HKT CAL C1 C 0 1 Y N N 49.366 -16.072 -2.775 0.897 -0.902 -0.041 CAL HKT 1 HKT CAM C2 C 0 1 Y N N 49.215 -17.279 -3.642 2.066 -0.080 -0.419 CAM HKT 2 HKT CAN C3 C 0 1 Y N N 48.440 -14.522 -5.471 -1.619 1.834 0.264 CAN HKT 3 HKT CAO C4 C 0 1 Y N N 49.076 -14.034 -1.882 -1.049 -1.526 0.830 CAO HKT 4 HKT CAP C5 C 0 1 Y N N 49.983 -14.713 -1.067 -0.525 -2.602 0.204 CAP HKT 5 HKT CAQ C6 C 0 1 Y N N 50.152 -15.979 -1.629 0.709 -2.217 -0.345 CAQ HKT 6 HKT CAR C7 C 0 1 Y N N 50.279 -17.858 -4.319 3.330 -0.377 0.099 CAR HKT 7 HKT CAS C8 C 0 1 Y N N 47.950 -17.868 -3.701 1.914 0.992 -1.298 CAS HKT 8 HKT CAT C9 C 0 1 Y N N 48.314 -15.590 -6.374 -2.967 1.641 0.500 CAT HKT 9 HKT CAU C10 C 0 1 Y N N 49.260 -13.470 -5.879 -1.227 2.659 -0.780 CAU HKT 10 HKT CAV C11 C 0 1 N N N 50.670 -14.169 0.187 -1.152 -3.969 0.112 CAV HKT 11 HKT CAW C12 C 0 1 Y N N 50.041 -19.006 -5.064 4.418 0.397 -0.259 CAW HKT 12 HKT CAX C13 C 0 1 Y N N 47.696 -19.003 -4.442 3.009 1.756 -1.647 CAX HKT 13 HKT CAY C14 C 0 1 Y N N 49.898 -13.509 -7.125 -2.211 3.255 -1.554 CAY HKT 14 HKT CAZ C15 C 0 1 Y N N 48.762 -19.570 -5.124 4.257 1.462 -1.127 CAZ HKT 15 HKT CBA C16 C 0 1 Y N N 49.724 -14.600 -7.969 -3.539 3.010 -1.261 CBA HKT 16 HKT CBB C17 C 0 1 N N N 49.732 -15.715 1.740 -2.622 -5.364 -1.213 CBB HKT 17 HKT FAB F1 F 0 1 N N N 51.529 -17.345 -4.284 3.487 -1.416 0.948 FAB HKT 18 HKT NAI N1 N 0 1 Y N N 48.750 -14.894 -2.857 -0.188 -0.479 0.684 NAI HKT 19 HKT NAJ N2 N 0 1 Y N N 48.930 -15.609 -7.580 -3.875 2.225 -0.257 NAJ HKT 20 HKT NAK N3 N 0 1 N N N 49.830 -14.288 1.396 -1.994 -4.042 -1.090 NAK HKT 21 HKT OAC O1 O 0 1 N N N 47.186 -13.205 -3.685 0.806 1.747 1.070 OAC HKT 22 HKT OAD O2 O 0 1 N N N 46.517 -15.338 -3.984 -1.008 0.895 2.563 OAD HKT 23 HKT SAA S1 S 0 1 N N N 47.696 -14.505 -4.019 -0.413 1.049 1.281 SAA HKT 24 HKT H1 H1 H 0 1 N N N 48.712 -13.025 -1.754 -1.993 -1.497 1.353 H1 HKT 25 HKT H2 H2 H 0 1 N N N 50.789 -16.759 -1.239 1.384 -2.847 -0.906 H2 HKT 26 HKT H3 H3 H 0 1 N N N 47.141 -17.418 -3.146 0.941 1.224 -1.706 H3 HKT 27 HKT H4 H4 H 0 1 N N N 47.699 -16.433 -6.095 -3.280 1.004 1.314 H4 HKT 28 HKT H5 H5 H 0 1 N N N 49.404 -12.619 -5.229 -0.181 2.832 -0.985 H5 HKT 29 HKT H6 H6 H 0 1 N N N 51.602 -14.731 0.349 -0.368 -4.725 0.053 H6 HKT 30 HKT H7 H7 H 0 1 N N N 50.906 -13.107 0.026 -1.764 -4.148 0.996 H7 HKT 31 HKT H8 H8 H 0 1 N N N 50.854 -19.469 -5.604 5.395 0.170 0.140 H8 HKT 32 HKT H9 H9 H 0 1 N N N 46.706 -19.433 -4.489 2.892 2.586 -2.329 H9 HKT 33 HKT H10 H10 H 0 1 N N N 50.528 -12.687 -7.432 -1.942 3.904 -2.375 H10 HKT 34 HKT H11 H11 H 0 1 N N N 48.602 -20.462 -5.711 5.110 2.064 -1.403 H11 HKT 35 HKT H12 H12 H 0 1 N N N 50.222 -14.635 -8.927 -4.311 3.471 -1.860 H12 HKT 36 HKT H13 H13 H 0 1 N N N 49.110 -15.834 2.640 -1.849 -6.129 -1.281 H13 HKT 37 HKT H14 H14 H 0 1 N N N 49.275 -16.263 0.903 -3.245 -5.553 -0.338 H14 HKT 38 HKT H15 H15 H 0 1 N N N 50.738 -16.115 1.934 -3.240 -5.391 -2.111 H15 HKT 39 HKT H16 H16 H 0 1 N N N 50.249 -13.784 2.152 -2.688 -3.310 -1.090 H16 HKT 40 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal HKT CBA NAJ DOUB Y N 1 HKT CBA CAY SING Y N 2 HKT NAJ CAT SING Y N 3 HKT CAY CAU DOUB Y N 4 HKT CAT CAN DOUB Y N 5 HKT CAU CAN SING Y N 6 HKT CAN SAA SING N N 7 HKT CAZ CAW DOUB Y N 8 HKT CAZ CAX SING Y N 9 HKT CAW CAR SING Y N 10 HKT CAX CAS DOUB Y N 11 HKT CAR FAB SING N N 12 HKT CAR CAM DOUB Y N 13 HKT SAA OAD DOUB N N 14 HKT SAA OAC DOUB N N 15 HKT SAA NAI SING N N 16 HKT CAS CAM SING Y N 17 HKT CAM CAL SING N N 18 HKT NAI CAL SING Y N 19 HKT NAI CAO SING Y N 20 HKT CAL CAQ DOUB Y N 21 HKT CAO CAP DOUB Y N 22 HKT CAQ CAP SING Y N 23 HKT CAP CAV SING N N 24 HKT CAV NAK SING N N 25 HKT NAK CBB SING N N 26 HKT CAO H1 SING N N 27 HKT CAQ H2 SING N N 28 HKT CAS H3 SING N N 29 HKT CAT H4 SING N N 30 HKT CAU H5 SING N N 31 HKT CAV H6 SING N N 32 HKT CAV H7 SING N N 33 HKT CAW H8 SING N N 34 HKT CAX H9 SING N N 35 HKT CAY H10 SING N N 36 HKT CAZ H11 SING N N 37 HKT CBA H12 SING N N 38 HKT CBB H13 SING N N 39 HKT CBB H14 SING N N 40 HKT CBB H15 SING N N 41 HKT NAK H16 SING N N 42 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor HKT InChI InChI 1.03 "InChI=1S/C17H16FN3O2S/c1-19-10-13-9-17(15-6-2-3-7-16(15)18)21(12-13)24(22,23)14-5-4-8-20-11-14/h2-9,11-12,19H,10H2,1H3" HKT InChIKey InChI 1.03 BFDBKMOZYNOTPK-UHFFFAOYSA-N HKT SMILES_CANONICAL CACTVS 3.385 "CNCc1cn(c(c1)c2ccccc2F)[S](=O)(=O)c3cccnc3" HKT SMILES CACTVS 3.385 "CNCc1cn(c(c1)c2ccccc2F)[S](=O)(=O)c3cccnc3" HKT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CNCc1cc(n(c1)S(=O)(=O)c2cccnc2)c3ccccc3F" HKT SMILES "OpenEye OEToolkits" 2.0.6 "CNCc1cc(n(c1)S(=O)(=O)c2cccnc2)c3ccccc3F" # _pdbx_chem_comp_identifier.comp_id HKT _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "1-[5-(2-fluorophenyl)-1-pyridin-3-ylsulfonyl-pyrrol-3-yl]-~{N}-methyl-methanamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site HKT "Create component" 2017-10-20 RCSB HKT "Initial release" 2018-04-11 RCSB HKT "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id HKT _pdbx_chem_comp_synonyms.name Vonoprazan _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##