data_HLY # _chem_comp.id HLY _chem_comp.name "(3~{R})-5-[[(5~{S})-5-azanyl-6-oxidanyl-6-oxidanylidene-hexyl]amino]-3-methyl-3-oxidanyl-5-oxidanylidene-pentanoic acid" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C12 H22 N2 O6" _chem_comp.mon_nstd_parent_comp_id LYS _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-07-22 _chem_comp.pdbx_modified_date 2017-11-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 290.313 _chem_comp.one_letter_code K _chem_comp.three_letter_code HLY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5OJO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal HLY O O1 O 0 1 N N N 33.005 21.285 0.861 -7.519 -0.560 -0.907 O HLY 1 HLY C C1 C 0 1 N N N 31.888 21.358 1.368 -6.911 0.018 -0.037 C HLY 2 HLY CA C2 C 0 1 N N S 31.382 22.650 2.036 -5.588 -0.521 0.442 CA HLY 3 HLY N N1 N 0 1 N N N 32.241 22.938 3.176 -5.478 -1.941 0.082 N HLY 4 HLY CB C3 C 0 1 N N N 31.205 23.826 1.086 -4.450 0.262 -0.217 CB HLY 5 HLY CG C4 C 0 1 N N N 31.880 23.453 -0.205 -3.112 -0.199 0.362 CG HLY 6 HLY CD C5 C 0 1 N N N 30.918 23.985 -1.260 -1.974 0.584 -0.297 CD HLY 7 HLY CE C6 C 0 1 N N N 31.609 23.535 -2.501 -0.635 0.122 0.282 CE HLY 8 HLY NZ N2 N 0 1 N N N 31.547 24.631 -3.484 0.454 0.872 -0.349 NZ HLY 9 HLY CAK C7 C 0 1 N N N 30.978 24.566 -4.702 1.732 0.632 0.007 CAK HLY 10 HLY OAT O2 O 0 1 N N N 30.374 23.594 -5.164 1.980 -0.204 0.850 OAT HLY 11 HLY CAL C8 C 0 1 N N N 31.186 25.851 -5.512 2.852 1.403 -0.641 CAL HLY 12 HLY CAM C9 C 0 1 N N R 29.866 26.485 -5.932 4.196 0.845 -0.169 CAM HLY 13 HLY CAS C10 C 0 1 N N N 28.833 26.341 -4.816 5.333 1.635 -0.818 CAS HLY 14 HLY OAR O3 O 0 1 N N N 30.100 27.864 -6.229 4.287 0.960 1.253 OAR HLY 15 HLY CAN C11 C 0 1 N N N 29.360 25.825 -7.201 4.305 -0.628 -0.569 CAN HLY 16 HLY CAO C12 C 0 1 N N N 30.044 26.526 -8.367 5.629 -1.178 -0.103 CAO HLY 17 HLY OAQ O4 O 0 1 N N N 29.920 25.996 -9.493 6.405 -0.465 0.488 OAQ HLY 18 HLY OAP O5 O 0 1 N N N 30.684 27.575 -8.112 5.946 -2.460 -0.345 OAP HLY 19 HLY H2 H2 H 0 1 N N N 30.383 22.419 2.433 -5.523 -0.414 1.525 H2 HLY 20 HLY H3 H3 H 0 1 N N N 32.312 22.125 3.754 -6.179 -2.489 0.556 H3 HLY 21 HLY H4 H4 H 0 1 N N N 33.151 23.196 2.851 -5.535 -2.066 -0.917 H4 HLY 22 HLY H6 H6 H 0 1 N N N 31.672 24.728 1.510 -4.462 0.084 -1.292 H6 HLY 23 HLY H7 H7 H 0 1 N N N 30.135 24.014 0.912 -4.582 1.327 -0.023 H7 HLY 24 HLY H8 H8 H 0 1 N N N 31.996 22.362 -0.290 -3.100 -0.021 1.437 H8 HLY 25 HLY H9 H9 H 0 1 N N N 32.865 23.934 -0.290 -2.980 -1.264 0.169 H9 HLY 26 HLY H10 H10 H 0 1 N N N 30.832 25.081 -1.217 -1.985 0.405 -1.372 H10 HLY 27 HLY H11 H11 H 0 1 N N N 29.919 23.534 -1.164 -2.106 1.648 -0.103 H11 HLY 28 HLY H12 H12 H 0 1 N N N 31.107 22.643 -2.905 -0.623 0.300 1.358 H12 HLY 29 HLY H13 H13 H 0 1 N N N 32.659 23.295 -2.277 -0.503 -0.942 0.089 H13 HLY 30 HLY H14 H14 H 0 1 N N N 31.965 25.501 -3.223 0.256 1.541 -1.023 H14 HLY 31 HLY H15 H15 H 0 1 N N N 31.767 25.611 -6.415 2.780 1.307 -1.725 H15 HLY 32 HLY H16 H16 H 0 1 N N N 31.745 26.571 -4.897 2.778 2.455 -0.364 H16 HLY 33 HLY H17 H17 H 0 1 N N N 29.210 26.823 -3.902 5.182 2.701 -0.643 H17 HLY 34 HLY H18 H18 H 0 1 N N N 27.893 26.822 -5.123 6.285 1.327 -0.384 H18 HLY 35 HLY H19 H19 H 0 1 N N N 28.652 25.274 -4.620 5.344 1.442 -1.891 H19 HLY 36 HLY H20 H20 H 0 1 N N N 30.419 28.306 -5.451 3.595 0.483 1.731 H20 HLY 37 HLY H21 H21 H 0 1 N N N 28.269 25.940 -7.278 3.495 -1.191 -0.106 H21 HLY 38 HLY H22 H22 H 0 1 N N N 29.617 24.755 -7.199 4.236 -0.716 -1.653 H22 HLY 39 HLY H23 H23 H 0 1 N N N 31.068 27.915 -8.912 6.806 -2.767 -0.028 H23 HLY 40 HLY OXT OXT O 0 1 N Y N 32.998 21.294 0.862 -7.412 1.142 0.499 OXT HLY 41 HLY H1 H1 H 0 1 N N N 33.328 20.406 0.933 -8.263 1.450 0.156 H1 HLY 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal HLY OAQ CAO DOUB N N 1 HLY CAO OAP SING N N 2 HLY CAO CAN SING N N 3 HLY CAN CAM SING N N 4 HLY OAR CAM SING N N 5 HLY CAM CAL SING N N 6 HLY CAM CAS SING N N 7 HLY CAL CAK SING N N 8 HLY OAT CAK DOUB N N 9 HLY CAK NZ SING N N 10 HLY NZ CE SING N N 11 HLY CE CD SING N N 12 HLY CD CG SING N N 13 HLY CG CB SING N N 14 HLY O C DOUB N N 15 HLY CB CA SING N N 16 HLY C CA SING N N 17 HLY CA N SING N N 18 HLY CA H2 SING N N 19 HLY N H3 SING N N 20 HLY N H4 SING N N 21 HLY CB H6 SING N N 22 HLY CB H7 SING N N 23 HLY CG H8 SING N N 24 HLY CG H9 SING N N 25 HLY CD H10 SING N N 26 HLY CD H11 SING N N 27 HLY CE H12 SING N N 28 HLY CE H13 SING N N 29 HLY NZ H14 SING N N 30 HLY CAL H15 SING N N 31 HLY CAL H16 SING N N 32 HLY CAS H17 SING N N 33 HLY CAS H18 SING N N 34 HLY CAS H19 SING N N 35 HLY OAR H20 SING N N 36 HLY CAN H21 SING N N 37 HLY CAN H22 SING N N 38 HLY OAP H23 SING N N 39 HLY C OXT SING N N 40 HLY OXT H1 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor HLY InChI InChI 1.03 "InChI=1S/C12H22N2O6/c1-12(20,7-10(16)17)6-9(15)14-5-3-2-4-8(13)11(18)19/h8,20H,2-7,13H2,1H3,(H,14,15)(H,16,17)(H,18,19)/t8-,12+/m0/s1" HLY InChIKey InChI 1.03 AIRHRYXMAJQOFD-QPUJVOFHSA-N HLY SMILES_CANONICAL CACTVS 3.385 "C[C@](O)(CC(O)=O)CC(=O)NCCCC[C@H](N)C(O)=O" HLY SMILES CACTVS 3.385 "C[C](O)(CC(O)=O)CC(=O)NCCCC[CH](N)C(O)=O" HLY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@@](CC(=O)NCCCC[C@@H](C(=O)O)N)(CC(=O)O)O" HLY SMILES "OpenEye OEToolkits" 2.0.6 "CC(CC(=O)NCCCCC(C(=O)O)N)(CC(=O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier HLY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(3~{R})-5-[[(5~{S})-5-azanyl-6-oxidanyl-6-oxidanylidene-hexyl]amino]-3-methyl-3-oxidanyl-5-oxidanylidene-pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site HLY "Create component" 2017-07-22 EBI HLY "Initial release" 2017-11-29 RCSB #