data_HMN # _chem_comp.id HMN _chem_comp.name "2,4,6,7,8,9-HEXAHYDROXY-5-METHYLCARBOXAMIDO NONANOIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H21 N O9" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2000-07-12 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 311.286 _chem_comp.one_letter_code ? _chem_comp.three_letter_code HMN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1F73 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal HMN C1 C1 C 0 1 N N N -9.560 42.546 21.074 0.266 -0.351 4.838 C1 HMN 1 HMN O1A O1A O 0 1 N N N -10.334 43.474 20.756 0.265 0.546 5.647 O1A HMN 2 HMN O1B O1B O 0 1 N N N -9.699 41.805 22.059 -0.439 -1.468 5.075 O1B HMN 3 HMN C2 C2 C 0 1 N N R -8.342 42.303 20.223 1.058 -0.216 3.564 C2 HMN 4 HMN O2 O2 O 0 1 N N N -7.773 40.992 20.411 1.717 1.051 3.544 O2 HMN 5 HMN C3 C3 C 0 1 N N N -7.302 43.351 20.604 0.115 -0.320 2.363 C3 HMN 6 HMN C4 C4 C 0 1 N N S -6.282 43.316 19.436 0.920 -0.183 1.069 C4 HMN 7 HMN O4 O4 O 0 1 N N N -5.493 42.141 19.691 1.579 1.084 1.049 O4 HMN 8 HMN C5 C5 C 0 1 N N R -5.458 44.593 19.519 -0.022 -0.287 -0.130 C5 HMN 9 HMN N2 N2 N 0 1 N N N -4.810 44.586 20.839 -1.041 0.761 -0.042 N2 HMN 10 HMN C10 C10 C 0 1 N N N -4.844 45.671 21.603 -2.315 0.440 0.260 C10 HMN 11 HMN O10 O10 O 0 1 N N N -5.264 46.777 21.250 -2.614 -0.715 0.472 O10 HMN 12 HMN C11 C11 C 0 1 N N N -4.298 45.532 23.017 -3.366 1.517 0.335 C11 HMN 13 HMN C6 C6 C 0 1 N N R -4.362 44.687 18.416 0.776 -0.114 -1.423 C6 HMN 14 HMN O6 O6 O 0 1 N N N -5.055 44.619 17.149 1.770 -1.137 -1.509 O6 HMN 15 HMN C7 C7 C 0 1 N N S -3.732 46.089 18.517 -0.166 -0.217 -2.624 C7 HMN 16 HMN O7 O7 O 0 1 N N N -4.757 47.065 18.471 -0.800 -1.498 -2.623 O7 HMN 17 HMN C8 C8 C 0 1 N N R -2.819 46.305 17.308 0.632 -0.045 -3.917 C8 HMN 18 HMN O8 O8 O 0 1 N N N -1.976 45.180 17.226 1.266 1.235 -3.918 O8 HMN 19 HMN C9 C9 C 0 1 N N N -2.018 47.574 17.529 -0.310 -0.148 -5.117 C9 HMN 20 HMN O9 O9 O 0 1 N N N -1.146 47.444 18.644 0.436 0.012 -6.325 O9 HMN 21 HMN HO1B HO1B H 0 0 N N N -9.110 41.099 22.300 -0.947 -1.555 5.893 HO1B HMN 22 HMN HC2 HC2 H 0 1 N N N -8.645 42.371 19.152 1.801 -1.012 3.512 HC2 HMN 23 HMN HO2 HO2 H 0 1 N N N -7.004 40.838 19.874 1.026 1.725 3.591 HO2 HMN 24 HMN HC31 1HC3 H 0 0 N N N -7.725 44.361 20.811 -0.627 0.475 2.415 HC31 HMN 25 HMN HC32 2HC3 H 0 0 N N N -6.848 43.200 21.611 -0.386 -1.287 2.378 HC32 HMN 26 HMN HC4 HC4 H 0 1 N N N -6.729 43.269 18.415 1.663 -0.979 1.017 HC4 HMN 27 HMN HO4 HO4 H 0 1 N N N -4.868 42.119 18.975 0.893 1.757 1.162 HO4 HMN 28 HMN HC5 HC5 H 0 1 N N N -6.131 45.468 19.368 -0.506 -1.264 -0.129 HC5 HMN 29 HMN HN2 HN2 H 0 1 N N N -4.314 43.791 21.243 -0.800 1.687 -0.203 HN2 HMN 30 HMN H111 1H11 H 0 0 N N N -4.326 46.443 23.658 -4.327 1.070 0.591 H111 HMN 31 HMN H112 2H11 H 0 0 N N N -4.817 44.693 23.536 -3.088 2.243 1.100 H112 HMN 32 HMN H113 3H11 H 0 0 N N N -3.256 45.135 22.977 -3.443 2.018 -0.629 H113 HMN 33 HMN HC6 HC6 H 0 1 N N N -3.591 43.887 18.518 1.259 0.862 -1.424 HC6 HMN 34 HMN HO6 HO6 H 0 1 N N N -4.386 44.676 16.476 1.302 -1.983 -1.505 HO6 HMN 35 HMN HC7 HC7 H 0 1 N N N -3.157 46.174 19.468 -0.924 0.562 -2.558 HC7 HMN 36 HMN HO7 HO7 H 0 1 N N N -4.368 47.929 18.533 -0.095 -2.158 -2.681 HO7 HMN 37 HMN HC8 HC8 H 0 1 N N N -3.392 46.416 16.358 1.391 -0.825 -3.982 HC8 HMN 38 HMN HO8 HO8 H 0 1 N N N -1.409 45.314 16.475 0.562 1.895 -3.859 HO8 HMN 39 HMN HC91 1HC9 H 0 0 N N N -1.464 47.875 16.608 -0.793 -1.125 -5.116 HC91 HMN 40 HMN HC92 2HC9 H 0 0 N N N -2.680 48.465 17.628 -1.068 0.631 -5.052 HC92 HMN 41 HMN HO9 HO9 H 0 1 N N N -0.644 48.238 18.782 -0.193 -0.059 -7.055 HO9 HMN 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal HMN C1 O1A DOUB N N 1 HMN C1 O1B SING N N 2 HMN C1 C2 SING N N 3 HMN O1B HO1B SING N N 4 HMN C2 O2 SING N N 5 HMN C2 C3 SING N N 6 HMN C2 HC2 SING N N 7 HMN O2 HO2 SING N N 8 HMN C3 C4 SING N N 9 HMN C3 HC31 SING N N 10 HMN C3 HC32 SING N N 11 HMN C4 O4 SING N N 12 HMN C4 C5 SING N N 13 HMN C4 HC4 SING N N 14 HMN O4 HO4 SING N N 15 HMN C5 N2 SING N N 16 HMN C5 C6 SING N N 17 HMN C5 HC5 SING N N 18 HMN N2 C10 SING N N 19 HMN N2 HN2 SING N N 20 HMN C10 O10 DOUB N N 21 HMN C10 C11 SING N N 22 HMN C11 H111 SING N N 23 HMN C11 H112 SING N N 24 HMN C11 H113 SING N N 25 HMN C6 O6 SING N N 26 HMN C6 C7 SING N N 27 HMN C6 HC6 SING N N 28 HMN O6 HO6 SING N N 29 HMN C7 O7 SING N N 30 HMN C7 C8 SING N N 31 HMN C7 HC7 SING N N 32 HMN O7 HO7 SING N N 33 HMN C8 O8 SING N N 34 HMN C8 C9 SING N N 35 HMN C8 HC8 SING N N 36 HMN O8 HO8 SING N N 37 HMN C9 O9 SING N N 38 HMN C9 HC91 SING N N 39 HMN C9 HC92 SING N N 40 HMN O9 HO9 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor HMN SMILES ACDLabs 10.04 "O=C(O)C(O)CC(O)C(NC(=O)C)C(O)C(O)C(O)CO" HMN SMILES_CANONICAL CACTVS 3.341 "CC(=O)N[C@H]([C@@H](O)C[C@@H](O)C(O)=O)[C@@H](O)[C@H](O)[C@H](O)CO" HMN SMILES CACTVS 3.341 "CC(=O)N[CH]([CH](O)C[CH](O)C(O)=O)[CH](O)[CH](O)[CH](O)CO" HMN SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=O)N[C@H]([C@H](C[C@H](C(=O)O)O)O)[C@H]([C@@H]([C@@H](CO)O)O)O" HMN SMILES "OpenEye OEToolkits" 1.5.0 "CC(=O)NC(C(CC(C(=O)O)O)O)C(C(C(CO)O)O)O" HMN InChI InChI 1.03 "InChI=1S/C11H21NO9/c1-4(14)12-8(5(15)2-6(16)11(20)21)10(19)9(18)7(17)3-13/h5-10,13,15-19H,2-3H2,1H3,(H,12,14)(H,20,21)/t5-,6+,7+,8+,9+,10+/m0/s1" HMN InChIKey InChI 1.03 REORMAHRVILHOU-IHICSVBISA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier HMN "SYSTEMATIC NAME" ACDLabs 10.04 "5-(acetylamino)-3,5-dideoxy-D-erythro-L-manno-nononic acid" HMN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,4S,5R,6R,7S,8R)-5-acetamido-2,4,6,7,8,9-hexahydroxy-nonanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site HMN "Create component" 2000-07-12 RCSB HMN "Modify descriptor" 2011-06-04 RCSB #