data_HNG # _chem_comp.id HNG _chem_comp.name "2-amino-5-(aminomethyl)-1,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H9 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms PreQ1 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-07-12 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 179.179 _chem_comp.one_letter_code ? _chem_comp.three_letter_code HNG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6E1W _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal HNG N1 N1 N 0 1 N N N 36.113 35.064 23.612 -1.712 1.255 -0.057 N1 HNG 1 HNG C2 C1 C 0 1 N N N 35.392 34.011 24.028 -2.396 0.140 0.087 C2 HNG 2 HNG N3 N2 N 0 1 N N N 35.609 33.399 25.220 -1.807 -1.083 0.123 N3 HNG 3 HNG C4 C2 C 0 1 Y N N 36.596 33.823 26.043 -0.443 -1.207 0.009 C4 HNG 4 HNG C5 C3 C 0 1 Y N N 37.414 34.962 25.633 0.315 -0.050 -0.144 C5 HNG 5 HNG C6 C4 C 0 1 N N N 37.117 35.577 24.324 -0.374 1.241 -0.176 C6 HNG 6 HNG O6 O1 O 0 1 N N N 37.775 36.546 23.906 0.252 2.280 -0.310 O6 HNG 7 HNG C7 C5 C 0 1 Y N N 38.382 35.178 26.728 1.708 -0.478 -0.239 C7 HNG 8 HNG C10 C6 C 0 1 N N N 39.471 36.221 26.831 2.914 0.409 -0.412 C10 HNG 9 HNG N11 N3 N 0 1 N N N 39.122 37.446 26.122 3.285 0.989 0.885 N11 HNG 10 HNG C8 C7 C 0 1 Y N N 38.071 34.212 27.673 1.703 -1.819 -0.140 C8 HNG 11 HNG N9 N4 N 0 1 Y N N 37.031 33.433 27.256 0.413 -2.260 0.009 N9 HNG 12 HNG N2 N5 N 0 1 N N N 34.391 33.546 23.248 -3.757 0.216 0.205 N2 HNG 13 HNG H1 H1 H 0 1 N N N 35.034 32.628 25.493 -2.355 -1.877 0.231 H1 HNG 14 HNG H2 H2 H 0 1 N N N 40.396 35.812 26.399 3.746 -0.181 -0.798 H2 HNG 15 HNG H3 H3 H 0 1 N N N 39.635 36.459 27.892 2.679 1.209 -1.114 H3 HNG 16 HNG H4 H4 H 0 1 N N N 39.866 38.108 26.214 4.092 1.589 0.795 H4 HNG 17 HNG H5 H5 H 0 1 N N N 38.976 37.241 25.154 2.509 1.487 1.294 H5 HNG 18 HNG H7 H7 H 0 1 N N N 38.585 34.092 28.615 2.578 -2.451 -0.173 H7 HNG 19 HNG H8 H8 H 0 1 N N N 36.644 32.675 27.781 0.150 -3.189 0.101 H8 HNG 20 HNG H9 H9 H 0 1 N N N 34.194 33.986 22.372 -4.199 1.080 0.181 H9 HNG 21 HNG H10 H10 H 0 1 N N N 33.847 32.762 23.547 -4.281 -0.593 0.311 H10 HNG 22 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal HNG N2 C2 SING N N 1 HNG N1 C2 DOUB N N 2 HNG N1 C6 SING N N 3 HNG O6 C6 DOUB N N 4 HNG C2 N3 SING N N 5 HNG C6 C5 SING N N 6 HNG N3 C4 SING N N 7 HNG C5 C4 DOUB Y N 8 HNG C5 C7 SING Y N 9 HNG C4 N9 SING Y N 10 HNG N11 C10 SING N N 11 HNG C7 C10 SING N N 12 HNG C7 C8 DOUB Y N 13 HNG N9 C8 SING Y N 14 HNG N3 H1 SING N N 15 HNG C10 H2 SING N N 16 HNG C10 H3 SING N N 17 HNG N11 H4 SING N N 18 HNG N11 H5 SING N N 19 HNG C8 H7 SING N N 20 HNG N9 H8 SING N N 21 HNG N2 H9 SING N N 22 HNG N2 H10 SING N N 23 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor HNG SMILES ACDLabs 12.01 "N2=C(Nc1ncc(c1C2=O)CN)N" HNG InChI InChI 1.03 "InChI=1S/C7H9N5O/c8-1-3-2-10-5-4(3)6(13)12-7(9)11-5/h2H,1,8H2,(H4,9,10,11,12,13)" HNG InChIKey InChI 1.03 MEYMBLGOKYDGLZ-UHFFFAOYSA-N HNG SMILES_CANONICAL CACTVS 3.385 "NCc1c[nH]c2NC(=NC(=O)c12)N" HNG SMILES CACTVS 3.385 "NCc1c[nH]c2NC(=NC(=O)c12)N" HNG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1c(c2c([nH]1)NC(=NC2=O)N)CN" HNG SMILES "OpenEye OEToolkits" 2.0.6 "c1c(c2c([nH]1)NC(=NC2=O)N)CN" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier HNG "SYSTEMATIC NAME" ACDLabs 12.01 "2-amino-5-(aminomethyl)-1,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one" HNG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "5-(aminomethyl)-2-azanyl-1,7-dihydropyrrolo[2,3-d]pyrimidin-4-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site HNG "Create component" 2018-07-12 RCSB HNG "Initial release" 2019-04-10 RCSB HNG "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id HNG _pdbx_chem_comp_synonyms.name PreQ1 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##