data_HRG # _chem_comp.id HRG _chem_comp.name L-HOMOARGININE _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C7 H16 N4 O2" _chem_comp.mon_nstd_parent_comp_id ARG _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-12-16 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 188.228 _chem_comp.one_letter_code R _chem_comp.three_letter_code HRG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1DM7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal HRG N N N 0 1 N N N Y Y N -2.019 6.383 63.091 2.823 1.769 -0.298 N HRG 1 HRG CA CA C 0 1 N N S Y N N -2.626 5.919 64.182 2.800 0.458 0.365 CA HRG 2 HRG CB CB C 0 1 N N N N N N -1.978 6.506 65.434 1.607 -0.351 -0.147 CB HRG 3 HRG CG CG C 0 1 N N N N N N 0.535 6.537 65.491 -0.887 -0.473 -0.240 CG HRG 4 HRG "CG'" "CG'" C 0 1 N N N N N N -0.714 5.759 65.806 0.307 0.337 0.272 "CG'" HRG 5 HRG CD CD C 0 1 N N N N N N 0.995 7.671 66.399 -2.187 0.216 0.179 CD HRG 6 HRG NE NE N 0 1 N N N N N N 0.323 8.807 66.114 -3.330 -0.560 -0.310 NE HRG 7 HRG CZ CZ C 0 1 N N N N N N 0.194 9.876 66.918 -4.611 -0.133 -0.054 CZ HRG 8 HRG NH1 NH1 N 0 1 N N N N N N 0.752 9.909 68.130 -5.628 -0.822 -0.490 NH1 HRG 9 HRG NH2 NH2 N 0 1 N N N N N N -0.499 10.920 66.490 -4.820 1.022 0.663 NH2 HRG 10 HRG C C C 0 1 N N N Y N Y -4.136 6.250 64.137 4.077 -0.281 0.059 C HRG 11 HRG O O O 0 1 N N N Y N Y -4.878 5.882 65.082 4.747 0.038 -0.894 O HRG 12 HRG OXT OXT O 0 1 N Y N Y N Y -4.572 6.875 63.160 4.470 -1.295 0.846 OXT HRG 13 HRG H HN1A H 0 0 N N N Y Y N -2.451 5.990 62.254 3.677 2.224 -0.011 HN1A HRG 14 HRG H2 HN2 H 0 1 N Y N Y Y N -1.013 6.215 63.113 2.907 1.592 -1.288 HN2 HRG 15 HRG HA HA H 0 1 N N N Y N N -2.513 4.810 64.215 2.710 0.598 1.442 HA HRG 16 HRG HB1 HB1 H 0 1 N N N N N N -1.788 7.598 65.321 1.651 -0.415 -1.234 HB1 HRG 17 HRG HB2 HB2 H 0 1 N N N N N N -2.696 6.542 66.286 1.640 -1.355 0.277 HB2 HRG 18 HRG HG1 HG1 H 0 1 N N N N N N 1.377 5.814 65.382 -0.843 -0.536 -1.327 HG1 HRG 19 HRG HG2 HG2 H 0 1 N N N N N N 0.444 6.936 64.454 -0.853 -1.476 0.185 HG2 HRG 20 HRG "HG'1" "HG'1" H 0 0 N N N N N N -0.732 5.449 66.877 0.263 0.401 1.359 "HG'1" HRG 21 HRG "HG'2" "HG'2" H 0 0 N N N N N N -0.689 4.752 65.327 0.273 1.341 -0.152 "HG'2" HRG 22 HRG HD1 HD1 H 0 1 N N N N N N 0.911 7.399 67.477 -2.231 0.279 1.267 HD1 HRG 23 HRG HD2 HD2 H 0 1 N N N N N N 2.099 7.819 66.350 -2.220 1.219 -0.245 HD2 HRG 24 HRG HNE HNE H 0 1 N N N N N N -0.623 8.524 65.859 -3.182 -1.374 -0.816 HNE HRG 25 HRG HN1 HN1 H 0 1 N N N N N N 0.987 9.552 67.203 -6.532 -0.521 -0.308 HN1 HRG 26 HRG HN21 HN21 H 0 0 N N N N N N -0.596 11.731 67.100 -5.724 1.323 0.844 HN21 HRG 27 HRG HN22 HN22 H 0 0 N N N N N N -0.114 11.225 65.596 -4.064 1.535 0.987 HN22 HRG 28 HRG HXT HXT H 0 1 N Y N Y N Y -5.499 7.078 63.132 5.290 -1.769 0.650 HXT HRG 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal HRG N CA SING N N 1 HRG N H SING N N 2 HRG N H2 SING N N 3 HRG CA CB SING N N 4 HRG CA C SING N N 5 HRG CA HA SING N N 6 HRG CB "CG'" SING N N 7 HRG CB HB1 SING N N 8 HRG CB HB2 SING N N 9 HRG CG "CG'" SING N N 10 HRG CG CD SING N N 11 HRG CG HG1 SING N N 12 HRG CG HG2 SING N N 13 HRG "CG'" "HG'1" SING N N 14 HRG "CG'" "HG'2" SING N N 15 HRG CD NE SING N N 16 HRG CD HD1 SING N N 17 HRG CD HD2 SING N N 18 HRG NE CZ SING N N 19 HRG NE HNE SING N N 20 HRG CZ NH1 DOUB N N 21 HRG CZ NH2 SING N N 22 HRG NH1 HN1 SING N N 23 HRG NH2 HN21 SING N N 24 HRG NH2 HN22 SING N N 25 HRG C O DOUB N N 26 HRG C OXT SING N N 27 HRG OXT HXT SING N N 28 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor HRG SMILES ACDLabs 10.04 "O=C(O)C(N)CCCCNC(=[N@H])N" HRG SMILES_CANONICAL CACTVS 3.341 "N[C@@H](CCCCNC(N)=N)C(O)=O" HRG SMILES CACTVS 3.341 "N[CH](CCCCNC(N)=N)C(O)=O" HRG SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C(CCNC(=N)N)C[C@@H](C(=O)O)N" HRG SMILES "OpenEye OEToolkits" 1.5.0 "C(CCNC(=N)N)CC(C(=O)O)N" HRG InChI InChI 1.03 "InChI=1S/C7H16N4O2/c8-5(6(12)13)3-1-2-4-11-7(9)10/h5H,1-4,8H2,(H,12,13)(H4,9,10,11)/t5-/m0/s1" HRG InChIKey InChI 1.03 QUOGESRFPZDMMT-YFKPBYRVSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier HRG "SYSTEMATIC NAME" ACDLabs 10.04 N~6~-carbamimidoyl-L-lysine HRG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-amino-6-carbamimidamido-hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site HRG "Create component" 1999-12-16 RCSB HRG "Modify descriptor" 2011-06-04 RCSB HRG "Modify backbone" 2023-11-03 PDBE HRG "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id HRG _pdbx_chem_comp_pcm.modified_residue_id ? _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #