data_HT1 # _chem_comp.id HT1 _chem_comp.name "2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAD _chem_comp.formula "C27 H28 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "HOECHST 33342" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 452.551 _chem_comp.one_letter_code ? _chem_comp.three_letter_code HT1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 403D _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal HT1 C1 C1 C 0 1 Y N N -2.883 25.623 35.618 0.195 0.133 8.734 C1 HT1 1 HT1 O1 O1 O 0 1 N N N -2.415 26.215 34.508 0.441 0.148 10.069 O1 HT1 2 HT1 C2 C2 C 0 1 Y N N -2.035 24.748 36.276 -0.891 0.830 8.222 C2 HT1 3 HT1 C3 C3 C 0 1 Y N N -2.474 24.177 37.461 -1.144 0.818 6.867 C3 HT1 4 HT1 C4 C4 C 0 1 Y N N -3.687 24.586 38.009 -0.304 0.105 6.009 C4 HT1 5 HT1 C5 C5 C 0 1 Y N N -4.523 25.491 37.370 0.787 -0.593 6.527 C5 HT1 6 HT1 C6 C6 C 0 1 Y N N -4.076 26.053 36.176 1.036 -0.572 7.882 C6 HT1 7 HT1 C7 C7 C 0 1 Y N N -4.065 23.977 39.190 -0.571 0.090 4.556 C7 HT1 8 HT1 N1 N1 N 0 1 Y N N -3.137 23.388 40.114 0.384 0.159 3.578 N1 HT1 9 HT1 C8 C8 C 0 1 Y N N -3.918 22.800 41.158 -0.274 0.115 2.363 C8 HT1 10 HT1 C9 C9 C 0 1 Y N N -5.245 23.047 40.931 -1.646 0.018 2.664 C9 HT1 11 HT1 N2 N2 N 0 1 Y N N -5.385 23.839 39.749 -1.760 0.002 4.008 N2 HT1 12 HT1 C10 C10 C 0 1 Y N N -6.232 22.740 41.812 -2.581 -0.045 1.623 C10 HT1 13 HT1 C11 C11 C 0 1 Y N N -5.832 22.075 42.973 -2.162 -0.014 0.326 C11 HT1 14 HT1 C12 C12 C 0 1 Y N N -4.488 21.862 43.214 -0.799 0.082 0.021 C12 HT1 15 HT1 C13 C13 C 0 1 Y N N -3.487 22.187 42.305 0.144 0.147 1.044 C13 HT1 16 HT1 C14 C14 C 0 1 Y N N -4.111 21.208 44.369 -0.360 0.115 -1.389 C14 HT1 17 HT1 N3 N3 N 0 1 Y N N -2.776 21.210 44.943 -0.897 -0.639 -2.399 N3 HT1 18 HT1 C15 C15 C 0 1 Y N N -2.841 20.327 46.050 -0.214 -0.316 -3.556 C15 HT1 19 HT1 C16 C16 C 0 1 Y N N -4.153 19.952 46.242 0.740 0.650 -3.193 C16 HT1 20 HT1 N4 N4 N 0 1 Y N N -4.982 20.400 45.175 0.597 0.874 -1.863 N4 HT1 21 HT1 C17 C17 C 0 1 Y N N -4.518 19.180 47.306 1.594 1.177 -4.167 C17 HT1 22 HT1 C18 C18 C 0 1 Y N N -3.535 18.847 48.227 1.498 0.752 -5.461 C18 HT1 23 HT1 C19 C19 C 0 1 Y N N -2.224 19.329 48.129 0.553 -0.205 -5.824 C19 HT1 24 HT1 C20 C20 C 0 1 Y N N -1.879 20.095 47.003 -0.301 -0.739 -4.874 C20 HT1 25 HT1 N5 N5 N 0 1 N N N -1.278 18.854 49.095 0.468 -0.629 -7.154 N5 HT1 26 HT1 C21 C21 C 0 1 N N N 0.097 19.005 48.775 1.492 0.112 -7.900 C21 HT1 27 HT1 C22 C22 C 0 1 N N N 0.980 18.231 49.741 1.378 -0.210 -9.390 C22 HT1 28 HT1 N6 N6 N 0 1 N N N 0.648 18.527 51.104 0.074 0.239 -9.894 N6 HT1 29 HT1 C23 C23 C 0 1 N N N -1.636 19.068 50.460 -0.949 -0.502 -9.148 C23 HT1 30 HT1 C24 C24 C 0 1 N N N -0.732 18.225 51.379 -0.834 -0.180 -7.658 C24 HT1 31 HT1 C25 C25 C 0 1 N N N 1.560 17.845 51.985 -0.014 -0.206 -11.291 C25 HT1 32 HT1 C26 C26 C 0 1 N N N -1.067 25.989 34.078 1.609 -0.647 10.283 C26 HT1 33 HT1 C27 C27 C 0 1 N N N -0.744 26.744 32.783 1.942 -0.672 11.776 C27 HT1 34 HT1 H2 H2 H 0 1 N N N -1.037 24.512 35.867 -1.540 1.381 8.887 H2 HT1 35 HT1 H3 H3 H 0 1 N N N -1.865 23.405 37.962 -1.990 1.360 6.470 H3 HT1 36 HT1 H5 H5 H 0 1 N N N -5.506 25.753 37.795 1.438 -1.145 5.866 H5 HT1 37 HT1 H6 H6 H 0 1 N N N -4.666 26.837 35.673 1.880 -1.112 8.284 H6 HT1 38 HT1 HN1 HN1 H 0 1 N N N -2.119 23.387 40.042 1.342 0.226 3.713 HN1 HT1 39 HT1 H10 H10 H 0 1 N N N -7.280 23.010 41.600 -3.634 -0.118 1.847 H10 HT1 40 HT1 H11 H11 H 0 1 N N N -6.579 21.717 43.701 -2.888 -0.063 -0.471 H11 HT1 41 HT1 H13 H13 H 0 1 N N N -2.419 21.972 42.482 1.196 0.221 0.810 H13 HT1 42 HT1 HN3 HN3 H 0 1 N N N -1.955 21.728 44.630 -1.621 -1.279 -2.318 HN3 HT1 43 HT1 H17 H17 H 0 1 N N N -5.561 18.840 47.416 2.330 1.919 -3.896 H17 HT1 44 HT1 H18 H18 H 0 1 N N N -3.803 18.178 49.062 2.160 1.161 -6.209 H18 HT1 45 HT1 H20 H20 H 0 1 N N N -0.865 20.509 46.868 -1.032 -1.482 -5.158 H20 HT1 46 HT1 H211 1H21 H 0 0 N N N 0.303 18.722 47.716 1.348 1.181 -7.748 H211 HT1 47 HT1 H212 2H21 H 0 0 N N N 0.389 20.079 48.726 2.481 -0.174 -7.541 H212 HT1 48 HT1 H221 1H22 H 0 0 N N N 0.943 17.134 49.540 2.173 0.300 -9.934 H221 HT1 49 HT1 H222 2H22 H 0 0 N N N 2.061 18.406 49.536 1.472 -1.286 -9.536 H222 HT1 50 HT1 H231 1H23 H 0 0 N N N -2.467 19.791 50.287 -1.937 -0.215 -9.506 H231 HT1 51 HT1 H232 2H23 H 0 0 N N N -2.448 19.174 49.704 -0.804 -1.572 -9.300 H232 HT1 52 HT1 H241 1H24 H 0 0 N N N -0.568 17.472 52.185 -1.629 -0.690 -7.114 H241 HT1 53 HT1 H242 2H24 H 0 0 N N N -0.020 18.108 52.229 -0.928 0.896 -7.511 H242 HT1 54 HT1 H251 1H25 H 0 0 N N N 1.301 18.075 53.045 -0.970 0.105 -11.711 H251 HT1 55 HT1 H252 2H25 H 0 0 N N N 1.591 16.747 51.789 0.798 0.237 -11.866 H252 HT1 56 HT1 H253 3H25 H 0 0 N N N 2.624 18.080 51.751 0.063 -1.292 -11.331 H253 HT1 57 HT1 H261 1H26 H 0 0 N N N -0.337 26.237 34.884 2.446 -0.219 9.731 H261 HT1 58 HT1 H262 2H26 H 0 0 N N N -0.851 24.899 33.976 1.425 -1.663 9.934 H262 HT1 59 HT1 H271 1H27 H 0 0 N N N 0.305 26.568 32.448 2.833 -1.279 11.939 H271 HT1 60 HT1 H272 2H27 H 0 0 N N N -1.473 26.495 31.976 2.126 0.343 12.125 H272 HT1 61 HT1 H273 3H27 H 0 0 N N N -0.959 27.833 32.884 1.105 -1.101 12.328 H273 HT1 62 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal HT1 C1 O1 SING N N 1 HT1 C1 C2 DOUB Y N 2 HT1 C1 C6 SING Y N 3 HT1 O1 C26 SING N N 4 HT1 C2 C3 SING Y N 5 HT1 C2 H2 SING N N 6 HT1 C3 C4 DOUB Y N 7 HT1 C3 H3 SING N N 8 HT1 C4 C5 SING Y N 9 HT1 C4 C7 SING Y N 10 HT1 C5 C6 DOUB Y N 11 HT1 C5 H5 SING N N 12 HT1 C6 H6 SING N N 13 HT1 C7 N1 SING Y N 14 HT1 C7 N2 DOUB Y N 15 HT1 N1 C8 SING Y N 16 HT1 N1 HN1 SING N N 17 HT1 C8 C9 DOUB Y N 18 HT1 C8 C13 SING Y N 19 HT1 C9 N2 SING Y N 20 HT1 C9 C10 SING Y N 21 HT1 C10 C11 DOUB Y N 22 HT1 C10 H10 SING N N 23 HT1 C11 C12 SING Y N 24 HT1 C11 H11 SING N N 25 HT1 C12 C13 DOUB Y N 26 HT1 C12 C14 SING Y N 27 HT1 C13 H13 SING N N 28 HT1 C14 N3 SING Y N 29 HT1 C14 N4 DOUB Y N 30 HT1 N3 C15 SING Y N 31 HT1 N3 HN3 SING N N 32 HT1 C15 C16 DOUB Y N 33 HT1 C15 C20 SING Y N 34 HT1 C16 N4 SING Y N 35 HT1 C16 C17 SING Y N 36 HT1 C17 C18 DOUB Y N 37 HT1 C17 H17 SING N N 38 HT1 C18 C19 SING Y N 39 HT1 C18 H18 SING N N 40 HT1 C19 C20 DOUB Y N 41 HT1 C19 N5 SING N N 42 HT1 C20 H20 SING N N 43 HT1 N5 C21 SING N N 44 HT1 N5 C24 SING N N 45 HT1 C21 C22 SING N N 46 HT1 C21 H211 SING N N 47 HT1 C21 H212 SING N N 48 HT1 C22 N6 SING N N 49 HT1 C22 H221 SING N N 50 HT1 C22 H222 SING N N 51 HT1 N6 C23 SING N N 52 HT1 N6 C25 SING N N 53 HT1 C23 C24 SING N N 54 HT1 C23 H231 SING N N 55 HT1 C23 H232 SING N N 56 HT1 C24 H241 SING N N 57 HT1 C24 H242 SING N N 58 HT1 C25 H251 SING N N 59 HT1 C25 H252 SING N N 60 HT1 C25 H253 SING N N 61 HT1 C26 C27 SING N N 62 HT1 C26 H261 SING N N 63 HT1 C26 H262 SING N N 64 HT1 C27 H271 SING N N 65 HT1 C27 H272 SING N N 66 HT1 C27 H273 SING N N 67 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor HT1 SMILES ACDLabs 10.04 "O(c1ccc(cc1)c3nc2ccc(cc2n3)c5nc4ccc(cc4n5)N6CCN(C)CC6)CC" HT1 SMILES_CANONICAL CACTVS 3.341 "CCOc1ccc(cc1)c2[nH]c3cc(ccc3n2)c4[nH]c5cc(ccc5n4)N6CCN(C)CC6" HT1 SMILES CACTVS 3.341 "CCOc1ccc(cc1)c2[nH]c3cc(ccc3n2)c4[nH]c5cc(ccc5n4)N6CCN(C)CC6" HT1 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCOc1ccc(cc1)c2[nH]c3cc(ccc3n2)c4[nH]c5cc(ccc5n4)N6CCN(CC6)C" HT1 SMILES "OpenEye OEToolkits" 1.5.0 "CCOc1ccc(cc1)c2[nH]c3cc(ccc3n2)c4[nH]c5cc(ccc5n4)N6CCN(CC6)C" HT1 InChI InChI 1.03 "InChI=1S/C27H28N6O/c1-3-34-21-8-4-18(5-9-21)26-28-22-10-6-19(16-24(22)30-26)27-29-23-11-7-20(17-25(23)31-27)33-14-12-32(2)13-15-33/h4-11,16-17H,3,12-15H2,1-2H3,(H,28,30)(H,29,31)" HT1 InChIKey InChI 1.03 PRDFBSVERLRRMY-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier HT1 "SYSTEMATIC NAME" ACDLabs 10.04 "2'-(4-ethoxyphenyl)-6-(4-methylpiperazin-1-yl)-1H,3'H-2,5'-bibenzimidazole" HT1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-(4-ethoxyphenyl)-6-[6-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-benzimidazole" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site HT1 "Create component" 1999-07-08 RCSB HT1 "Modify aromatic_flag" 2011-06-04 RCSB HT1 "Modify descriptor" 2011-06-04 RCSB HT1 "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id HT1 _pdbx_chem_comp_synonyms.name "HOECHST 33342" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##