data_HT5
#
_chem_comp.id HT5
_chem_comp.name "(4S)-4-(decanoylamino)-5-hydroxy-3,4-dihydro-2H-thiophenium"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C14 H25 N O2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2007-09-19
_chem_comp.pdbx_modified_date 2020-01-14
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 271.419
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code HT5
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2VC7
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
HT5 O1 O1 O 0 1 N N N 16.239 -18.248 -10.733 -1.507 -0.282 1.178 O1 HT5 1
HT5 C10 C10 C 0 1 N N N 16.470 -17.879 -11.837 -1.532 0.400 0.176 C10 HT5 2
HT5 N2 N2 N 0 1 N N N 17.252 -16.825 -12.057 -2.710 0.831 -0.317 N2 HT5 3
HT5 SD SD S 0 1 N N N 19.551 -14.473 -10.968 -6.129 -0.854 -0.261 SD HT5 4
HT5 C11 C11 C 0 1 N N S 17.745 -16.283 -10.819 -3.961 0.475 0.357 C11 HT5 5
HT5 C12 C12 C 0 1 N N N 18.040 -14.810 -10.720 -4.418 -0.875 -0.124 C12 HT5 6
HT5 O2 O2 O 0 1 N N N 17.343 -13.894 -10.463 -3.698 -1.819 -0.374 O2 HT5 7
HT5 C13 C13 C 0 1 N N N 19.079 -17.009 -10.780 -5.016 1.541 0.058 C13 HT5 8
HT5 C14 C14 C 0 1 N N N 20.183 -16.073 -11.234 -6.392 0.874 0.245 C14 HT5 9
HT5 C9 C9 C 0 1 N N N 15.830 -18.648 -12.904 -0.245 0.771 -0.515 C9 HT5 10
HT5 C2 C2 C 0 1 N N N 14.361 -18.595 -12.491 0.936 0.165 0.246 C2 HT5 11
HT5 C1 C1 C 0 1 N N N 14.064 -19.478 -11.301 2.242 0.542 -0.455 C1 HT5 12
HT5 C50 C50 C 0 1 N N N 14.363 -20.952 -11.523 3.423 -0.065 0.306 C50 HT5 13
HT5 C8 C8 C 0 1 N N N 14.805 -25.071 -13.769 9.704 -0.147 -0.275 C8 HT5 14
HT5 C6 C6 C 0 1 N N N 13.334 -24.852 -13.536 8.397 -0.524 0.427 C6 HT5 15
HT5 C3 C3 C 0 1 N N N 13.986 -21.472 -12.909 4.729 0.312 -0.395 C3 HT5 16
HT5 C4 C4 C 0 1 N N N 12.836 -22.450 -12.864 5.910 -0.294 0.366 C4 HT5 17
HT5 C5 C5 C 0 1 N N N 12.858 -23.476 -13.982 7.217 0.083 -0.335 C5 HT5 18
HT5 H11 H11 H 0 1 N N N 17.120 -16.601 -9.971 -3.789 0.433 1.433 H11 HT5 19
HT5 H141 H141 H 0 0 N N N 20.408 -16.228 -12.300 -7.136 1.349 -0.394 H141 HT5 20
HT5 H142 H142 H 0 0 N N N 21.095 -16.233 -10.640 -6.700 0.922 1.289 H142 HT5 21
HT5 H131 H131 H 0 0 N N N 19.041 -17.881 -11.449 -4.910 2.375 0.750 H131 HT5 22
HT5 H132 H132 H 0 0 N N N 19.283 -17.344 -9.752 -4.909 1.893 -0.969 H132 HT5 23
HT5 HA HA H 0 1 N N N 17.468 -16.459 -12.962 -2.730 1.377 -1.119 HA HT5 24
HT5 H9C1 H9C1 H 0 0 N N N 15.987 -18.178 -13.886 -0.256 0.387 -1.535 H9C1 HT5 25
HT5 H9C2 H9C2 H 0 0 N N N 16.202 -19.683 -12.930 -0.144 1.856 -0.537 H9C2 HT5 26
HT5 H2C1 H2C1 H 0 0 N N N 14.104 -17.557 -12.233 0.947 0.549 1.266 H2C1 HT5 27
HT5 H2C2 H2C2 H 0 0 N N N 13.744 -18.926 -13.339 0.835 -0.920 0.268 H2C2 HT5 28
HT5 H1C1 H1C1 H 0 0 N N N 14.671 -19.128 -10.453 2.231 0.157 -1.475 H1C1 HT5 29
HT5 H1C2 H1C2 H 0 0 N N N 12.997 -19.377 -11.055 2.343 1.627 -0.477 H1C2 HT5 30
HT5 H501 H501 H 0 0 N N N 15.442 -21.109 -11.379 3.434 0.320 1.326 H501 HT5 31
HT5 H502 H502 H 0 0 N N N 13.804 -21.533 -10.774 3.322 -1.150 0.329 H502 HT5 32
HT5 H3C1 H3C1 H 0 0 N N N 13.699 -20.618 -13.541 4.719 -0.072 -1.414 H3C1 HT5 33
HT5 H3C2 H3C2 H 0 0 N N N 14.860 -21.975 -13.347 4.830 1.397 -0.417 H3C2 HT5 34
HT5 H4C1 H4C1 H 0 0 N N N 12.873 -22.984 -11.903 5.921 0.091 1.386 H4C1 HT5 35
HT5 H4C2 H4C2 H 0 0 N N N 11.896 -21.883 -12.933 5.809 -1.379 0.389 H4C2 HT5 36
HT5 H5C1 H5C1 H 0 0 N N N 11.839 -23.574 -14.385 7.317 1.168 -0.357 H5C1 HT5 37
HT5 H5C2 H5C2 H 0 0 N N N 13.531 -23.114 -14.773 7.206 -0.302 -1.354 H5C2 HT5 38
HT5 H6C1 H6C1 H 0 0 N N N 13.129 -24.962 -12.461 8.297 -1.609 0.449 H6C1 HT5 39
HT5 H6C2 H6C2 H 0 0 N N N 12.773 -25.615 -14.096 8.408 -0.139 1.446 H6C2 HT5 40
HT5 H8C1 H8C1 H 0 0 N N N 15.085 -26.078 -13.427 9.693 -0.531 -1.294 H8C1 HT5 41
HT5 H8C2 H8C2 H 0 0 N N N 15.025 -24.974 -14.842 9.804 0.938 -0.297 H8C2 HT5 42
HT5 H8C3 H8C3 H 0 0 N N N 15.381 -24.321 -13.207 10.545 -0.579 0.268 H8C3 HT5 43
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
HT5 O2 C12 DOUB N N 1
HT5 C12 SD SING N N 2
HT5 C12 C11 SING N N 3
HT5 SD C14 SING N N 4
HT5 C14 C13 SING N N 5
HT5 C13 C11 SING N N 6
HT5 C11 N2 SING N N 7
HT5 N2 C10 SING N N 8
HT5 C10 O1 DOUB N N 9
HT5 C10 C9 SING N N 10
HT5 C9 C2 SING N N 11
HT5 C2 C1 SING N N 12
HT5 C1 C50 SING N N 13
HT5 C50 C3 SING N N 14
HT5 C3 C4 SING N N 15
HT5 C4 C5 SING N N 16
HT5 C5 C6 SING N N 17
HT5 C6 C8 SING N N 18
HT5 C11 H11 SING N N 19
HT5 C14 H141 SING N N 20
HT5 C14 H142 SING N N 21
HT5 C13 H131 SING N N 22
HT5 C13 H132 SING N N 23
HT5 N2 HA SING N N 24
HT5 C9 H9C1 SING N N 25
HT5 C9 H9C2 SING N N 26
HT5 C2 H2C1 SING N N 27
HT5 C2 H2C2 SING N N 28
HT5 C1 H1C1 SING N N 29
HT5 C1 H1C2 SING N N 30
HT5 C50 H501 SING N N 31
HT5 C50 H502 SING N N 32
HT5 C3 H3C1 SING N N 33
HT5 C3 H3C2 SING N N 34
HT5 C4 H4C1 SING N N 35
HT5 C4 H4C2 SING N N 36
HT5 C5 H5C1 SING N N 37
HT5 C5 H5C2 SING N N 38
HT5 C6 H6C1 SING N N 39
HT5 C6 H6C2 SING N N 40
HT5 C8 H8C1 SING N N 41
HT5 C8 H8C2 SING N N 42
HT5 C8 H8C3 SING N N 43
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
HT5 SMILES ACDLabs 10.04 "O=C(NC1C(O)=[S+]CC1)CCCCCCCCC"
HT5 InChI InChI 1.03 "InChI=1S/C14H25NO2S/c1-2-3-4-5-6-7-8-9-13(16)15-12-10-11-18-14(12)17/h12H,2-11H2,1H3,(H,15,16)/t12-/m0/s1"
HT5 InChIKey InChI 1.03 PZUMIWRJDZWNPN-LBPRGKRZSA-N
HT5 SMILES_CANONICAL CACTVS 3.385 "CCCCCCCCCC(=O)N[C@H]1CCSC1=O"
HT5 SMILES CACTVS 3.385 "CCCCCCCCCC(=O)N[CH]1CCSC1=O"
HT5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCC(=O)N[C@H]1CCSC1=O"
HT5 SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCC(=O)NC1CCSC1=O"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
HT5 "SYSTEMATIC NAME" ACDLabs 10.04 "(4S)-4-(decanoylamino)-5-hydroxy-3,4-dihydro-2H-thiophenium"
HT5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(3~{S})-2-oxidanylidenethiolan-3-yl]decanamide"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
HT5 "Create component" 2007-09-19 RCSB
HT5 "Modify descriptor" 2011-06-04 RCSB
HT5 "Modify linking type" 2020-01-14 PDBE
##