data_HVL # _chem_comp.id HVL _chem_comp.name "(3R,5R,6S,8R,9R,10R,12R,13R,14R,17S)-4,4,8,10,14-pentamethyl-17-[(2R)-2,6,6-trimethyloxan-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthrene-3,6,12-triol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H52 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-02-10 _chem_comp.pdbx_modified_date 2022-03-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 476.731 _chem_comp.one_letter_code ? _chem_comp.three_letter_code HVL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7E3M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal HVL C3 C1 C 0 1 N N N -28.178 -0.718 -25.753 -6.062 0.743 0.734 C3 HVL 1 HVL C4 C2 C 0 1 N N N -27.009 -1.354 -24.991 -5.162 -0.172 -0.138 C4 HVL 2 HVL C5 C3 C 0 1 N N R -25.659 -0.937 -25.636 -5.477 -1.592 0.337 C5 HVL 3 HVL C6 C4 C 0 1 N N N -25.199 -1.976 -26.638 -4.419 -2.608 -0.063 C6 HVL 4 HVL C7 C5 C 0 1 N N N -24.904 -3.310 -25.954 -3.041 -2.141 0.398 C7 HVL 5 HVL C8 C6 C 0 1 N N R -25.901 -3.708 -24.862 -2.687 -0.827 -0.323 C8 HVL 6 HVL C9 C7 C 0 1 N N R -27.218 -2.896 -24.983 -3.722 0.228 0.066 C9 HVL 7 HVL C10 C8 C 0 1 N N N -27.005 -0.735 -23.583 -5.624 -0.003 -1.586 C10 HVL 8 HVL O11 O1 O 0 1 N N N -25.675 0.334 -26.322 -5.622 -1.586 1.764 O11 HVL 9 HVL C22 C9 C 0 1 N N S -28.264 -3.377 -23.956 -3.343 1.558 -0.583 C22 HVL 10 HVL C23 C10 C 0 1 N N N -28.604 -4.864 -24.084 -2.022 2.030 0.049 C23 HVL 11 HVL C24 C11 C 0 1 N N R -27.367 -5.753 -24.118 -0.907 1.030 -0.255 C24 HVL 12 HVL C25 C12 C 0 1 N N R -26.267 -5.202 -25.064 -1.316 -0.375 0.175 C25 HVL 13 HVL C27 C13 C 0 1 N N N -25.142 -3.465 -23.550 -2.670 -1.112 -1.820 C27 HVL 14 HVL C33 C14 C 0 1 N N R -27.701 -7.157 -24.657 0.358 1.390 0.507 C33 HVL 15 HVL C34 C15 C 0 1 N N R -26.504 -8.073 -24.464 1.469 0.373 0.145 C34 HVL 16 HVL C35 C16 C 0 1 N N S -27.081 -9.472 -24.693 2.711 0.996 0.790 C35 HVL 17 HVL C36 C17 C 0 1 N N N -28.493 -9.384 -24.091 2.472 2.526 0.698 C36 HVL 18 HVL C37 C18 C 0 1 N N N -28.833 -7.901 -23.955 1.043 2.710 0.112 C37 HVL 19 HVL C38 C19 C 0 1 N N R -25.315 -7.638 -25.311 1.081 -1.012 0.605 C38 HVL 20 HVL C39 C20 C 0 1 N N N -25.032 -6.139 -25.120 -0.229 -1.402 -0.114 C39 HVL 21 HVL C40 C21 C 0 1 N N R -26.234 -10.641 -24.180 3.974 0.613 -0.013 C40 HVL 22 HVL O41 O2 O 0 1 N N N -25.054 -10.708 -25.013 4.151 -0.784 0.094 O41 HVL 23 HVL C42 C22 C 0 1 N N N -24.104 -11.783 -25.065 5.390 -1.412 -0.163 C42 HVL 24 HVL C43 C23 C 0 1 N N N -24.802 -13.132 -25.084 6.548 -0.649 0.486 C43 HVL 25 HVL C44 C24 C 0 1 N N N -26.064 -13.154 -24.214 6.475 0.826 0.082 C44 HVL 26 HVL C45 C25 C 0 1 N N N -26.985 -11.934 -24.381 5.146 1.400 0.571 C45 HVL 27 HVL C46 C26 C 0 1 N N N -25.894 -10.445 -22.698 3.739 1.041 -1.464 C46 HVL 28 HVL C47 C27 C 0 1 N N N -28.081 -7.148 -26.155 0.115 1.415 2.021 C47 HVL 29 HVL C48 C28 C 0 1 N N N -26.865 -5.851 -22.667 -0.592 1.109 -1.757 C48 HVL 30 HVL C49 C29 C 0 1 N N N -23.255 -11.606 -23.824 5.649 -1.578 -1.660 C49 HVL 31 HVL C50 C30 C 0 1 N N N -23.191 -11.716 -26.292 5.352 -2.822 0.464 C50 HVL 32 HVL O51 O3 O 0 1 N N N -24.130 -8.367 -24.937 2.102 -1.952 0.247 O51 HVL 33 HVL O2 O4 O 0 1 N N N -29.476 -2.607 -24.032 -4.319 2.572 -0.335 O2 HVL 34 HVL H1 H1 H 0 1 N N N -29.128 -1.020 -25.287 -5.921 1.782 0.436 H1 HVL 35 HVL H2 H2 H 0 1 N N N -28.085 0.378 -25.719 -7.107 0.464 0.596 H2 HVL 36 HVL H3 H3 H 0 1 N N N -28.160 -1.055 -26.800 -5.791 0.626 1.783 H3 HVL 37 HVL H4 H4 H 0 1 N N N -24.911 -0.893 -24.831 -6.440 -1.894 -0.099 H4 HVL 38 HVL H5 H5 H 0 1 N N N -24.285 -1.617 -27.133 -4.642 -3.562 0.442 H5 HVL 39 HVL H6 H6 H 0 1 N N N -25.989 -2.125 -27.389 -4.443 -2.797 -1.130 H6 HVL 40 HVL H7 H7 H 0 1 N N N -24.907 -4.097 -26.723 -3.049 -1.964 1.472 H7 HVL 41 HVL H8 H8 H 0 1 N N N -23.905 -3.247 -25.498 -2.298 -2.897 0.153 H8 HVL 42 HVL H9 H9 H 0 1 N N N -27.632 -3.145 -25.971 -3.590 0.384 1.166 H9 HVL 43 HVL H10 H10 H 0 1 N N N -26.179 -1.163 -22.996 -5.580 1.051 -1.861 H10 HVL 44 HVL H11 H11 H 0 1 N N N -26.873 0.354 -23.662 -4.973 -0.578 -2.245 H11 HVL 45 HVL H12 H12 H 0 1 N N N -27.961 -0.953 -23.084 -6.649 -0.362 -1.685 H12 HVL 46 HVL H13 H13 H 0 1 N N N -25.960 1.014 -25.723 -5.823 -2.452 2.143 H13 HVL 47 HVL H14 H14 H 0 1 N N N -27.825 -3.230 -22.958 -3.219 1.453 -1.655 H14 HVL 48 HVL H15 H15 H 0 1 N N N -29.171 -5.016 -25.014 -1.762 3.003 -0.367 H15 HVL 49 HVL H16 H16 H 0 1 N N N -29.224 -5.158 -23.224 -2.176 2.124 1.122 H16 HVL 50 HVL H17 H17 H 0 1 N N N -26.707 -5.253 -26.071 -1.426 -0.369 1.284 H17 HVL 51 HVL H18 H18 H 0 1 N N N -25.787 -3.727 -22.699 -3.604 -1.594 -2.109 H18 HVL 52 HVL H19 H19 H 0 1 N N N -24.237 -4.089 -23.529 -2.559 -0.176 -2.367 H19 HVL 53 HVL H20 H20 H 0 1 N N N -24.858 -2.405 -23.482 -1.833 -1.771 -2.055 H20 HVL 54 HVL H21 H21 H 0 1 N N N -26.202 -8.008 -23.408 1.644 0.353 -0.936 H21 HVL 55 HVL H22 H22 H 0 1 N N N -27.197 -9.604 -25.779 2.807 0.679 1.823 H22 HVL 56 HVL H23 H23 H 0 1 N N N -29.218 -9.878 -24.755 2.539 2.980 1.684 H23 HVL 57 HVL H24 H24 H 0 1 N N N -28.513 -9.868 -23.103 3.206 2.976 0.028 H24 HVL 58 HVL H25 H25 H 0 1 N N N -28.882 -7.614 -22.894 1.092 2.846 -0.962 H25 HVL 59 HVL H26 H26 H 0 1 N N N -29.796 -7.681 -24.439 0.541 3.552 0.591 H26 HVL 60 HVL H27 H27 H 0 1 N N N -25.549 -7.820 -26.370 0.933 -1.047 1.682 H27 HVL 61 HVL H28 H28 H 0 1 N N N -24.480 -6.021 -24.176 -0.544 -2.377 0.260 H28 HVL 62 HVL H29 H29 H 0 1 N N N -24.400 -5.809 -25.958 -0.036 -1.476 -1.179 H29 HVL 63 HVL H30 H30 H 0 1 N N N -25.084 -13.368 -26.121 6.476 -0.734 1.571 H30 HVL 64 HVL H31 H31 H 0 1 N N N -24.103 -13.896 -24.711 7.495 -1.073 0.152 H31 HVL 65 HVL H32 H32 H 0 1 N N N -26.640 -14.055 -24.470 7.298 1.367 0.559 H32 HVL 66 HVL H33 H33 H 0 1 N N N -25.752 -13.205 -23.160 6.564 0.932 -0.995 H33 HVL 67 HVL H34 H34 H 0 1 N N N -27.412 -11.945 -25.395 5.069 2.446 0.266 H34 HVL 68 HVL H35 H35 H 0 1 N N N -27.796 -11.995 -23.640 5.109 1.349 1.662 H35 HVL 69 HVL H36 H36 H 0 1 N N N -26.823 -10.401 -22.111 3.412 2.081 -1.488 H36 HVL 70 HVL H37 H37 H 0 1 N N N -25.279 -11.288 -22.348 4.666 0.939 -2.028 H37 HVL 71 HVL H38 H38 H 0 1 N N N -25.335 -9.506 -22.571 2.971 0.409 -1.910 H38 HVL 72 HVL H39 H39 H 0 1 N N N -28.947 -6.488 -26.310 1.037 1.690 2.533 H39 HVL 73 HVL H40 H40 H 0 1 N N N -27.230 -6.781 -26.747 -0.661 2.145 2.252 H40 HVL 74 HVL H41 H41 H 0 1 N N N -28.336 -8.169 -26.475 -0.205 0.428 2.354 H41 HVL 75 HVL H42 H42 H 0 1 N N N -27.668 -6.244 -22.026 -0.128 2.069 -1.981 H42 HVL 76 HVL H43 H43 H 0 1 N N N -25.998 -6.527 -22.624 0.090 0.303 -2.027 H43 HVL 77 HVL H44 H44 H 0 1 N N N -26.569 -4.852 -22.313 -1.516 1.009 -2.327 H44 HVL 78 HVL H45 H45 H 0 1 N N N -23.896 -11.652 -22.931 5.659 -0.599 -2.138 H45 HVL 79 HVL H46 H46 H 0 1 N N N -22.503 -12.408 -23.777 6.612 -2.066 -1.811 H46 HVL 80 HVL H47 H47 H 0 1 N N N -22.749 -10.630 -23.862 4.860 -2.189 -2.100 H47 HVL 81 HVL H48 H48 H 0 1 N N N -22.669 -10.748 -26.309 4.541 -3.397 0.018 H48 HVL 82 HVL H49 H49 H 0 1 N N N -22.453 -12.530 -26.245 6.300 -3.328 0.279 H49 HVL 83 HVL H50 H50 H 0 1 N N N -23.795 -11.822 -27.205 5.189 -2.738 1.539 H50 HVL 84 HVL H51 H51 H 0 1 N N N -24.282 -9.298 -25.047 1.898 -2.865 0.488 H51 HVL 85 HVL H52 H52 H 0 1 N N N -30.097 -2.928 -23.388 -4.107 3.427 -0.734 H52 HVL 86 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal HVL C6 C7 SING N N 1 HVL C6 C5 SING N N 2 HVL O11 C5 SING N N 3 HVL C50 C42 SING N N 4 HVL C47 C33 SING N N 5 HVL C7 C8 SING N N 6 HVL C3 C4 SING N N 7 HVL C5 C4 SING N N 8 HVL C38 C39 SING N N 9 HVL C38 O51 SING N N 10 HVL C38 C34 SING N N 11 HVL C39 C25 SING N N 12 HVL C43 C42 SING N N 13 HVL C43 C44 SING N N 14 HVL C42 O41 SING N N 15 HVL C42 C49 SING N N 16 HVL C25 C8 SING N N 17 HVL C25 C24 SING N N 18 HVL O41 C40 SING N N 19 HVL C4 C9 SING N N 20 HVL C4 C10 SING N N 21 HVL C9 C8 SING N N 22 HVL C9 C22 SING N N 23 HVL C8 C27 SING N N 24 HVL C35 C34 SING N N 25 HVL C35 C40 SING N N 26 HVL C35 C36 SING N N 27 HVL C33 C34 SING N N 28 HVL C33 C24 SING N N 29 HVL C33 C37 SING N N 30 HVL C45 C44 SING N N 31 HVL C45 C40 SING N N 32 HVL C40 C46 SING N N 33 HVL C24 C23 SING N N 34 HVL C24 C48 SING N N 35 HVL C36 C37 SING N N 36 HVL C23 C22 SING N N 37 HVL O2 C22 SING N N 38 HVL C3 H1 SING N N 39 HVL C3 H2 SING N N 40 HVL C3 H3 SING N N 41 HVL C5 H4 SING N N 42 HVL C6 H5 SING N N 43 HVL C6 H6 SING N N 44 HVL C7 H7 SING N N 45 HVL C7 H8 SING N N 46 HVL C9 H9 SING N N 47 HVL C10 H10 SING N N 48 HVL C10 H11 SING N N 49 HVL C10 H12 SING N N 50 HVL O11 H13 SING N N 51 HVL C22 H14 SING N N 52 HVL C23 H15 SING N N 53 HVL C23 H16 SING N N 54 HVL C25 H17 SING N N 55 HVL C27 H18 SING N N 56 HVL C27 H19 SING N N 57 HVL C27 H20 SING N N 58 HVL C34 H21 SING N N 59 HVL C35 H22 SING N N 60 HVL C36 H23 SING N N 61 HVL C36 H24 SING N N 62 HVL C37 H25 SING N N 63 HVL C37 H26 SING N N 64 HVL C38 H27 SING N N 65 HVL C39 H28 SING N N 66 HVL C39 H29 SING N N 67 HVL C43 H30 SING N N 68 HVL C43 H31 SING N N 69 HVL C44 H32 SING N N 70 HVL C44 H33 SING N N 71 HVL C45 H34 SING N N 72 HVL C45 H35 SING N N 73 HVL C46 H36 SING N N 74 HVL C46 H37 SING N N 75 HVL C46 H38 SING N N 76 HVL C47 H39 SING N N 77 HVL C47 H40 SING N N 78 HVL C47 H41 SING N N 79 HVL C48 H42 SING N N 80 HVL C48 H43 SING N N 81 HVL C48 H44 SING N N 82 HVL C49 H45 SING N N 83 HVL C49 H46 SING N N 84 HVL C49 H47 SING N N 85 HVL C50 H48 SING N N 86 HVL C50 H49 SING N N 87 HVL C50 H50 SING N N 88 HVL O51 H51 SING N N 89 HVL O2 H52 SING N N 90 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor HVL InChI InChI 1.03 "InChI=1S/C30H52O4/c1-25(2)12-9-13-30(8,34-25)18-10-15-28(6)23(18)19(31)16-21-27(5)14-11-22(33)26(3,4)24(27)20(32)17-29(21,28)7/h18-24,31-33H,9-17H2,1-8H3/t18-,19+,20-,21+,22+,23-,24-,27+,28+,29+,30+/m0/s1" HVL InChIKey InChI 1.03 QFJUYMMIBFBOJY-FAKBLDBGSA-N HVL SMILES_CANONICAL CACTVS 3.385 "CC1(C)CCC[C@@](C)(O1)[C@H]2CC[C@]3(C)[C@@H]2[C@H](O)C[C@@H]4[C@@]5(C)CC[C@@H](O)C(C)(C)[C@@H]5[C@@H](O)C[C@@]34C" HVL SMILES CACTVS 3.385 "CC1(C)CCC[C](C)(O1)[CH]2CC[C]3(C)[CH]2[CH](O)C[CH]4[C]5(C)CC[CH](O)C(C)(C)[CH]5[CH](O)C[C]34C" HVL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@]1(CCCC(O1)(C)C)[C@H]2CC[C@@]3([C@@H]2[C@@H](C[C@H]4[C@]3(C[C@@H]([C@@H]5[C@@]4(CC[C@H](C5(C)C)O)C)O)C)O)C" HVL SMILES "OpenEye OEToolkits" 2.0.7 "CC1(CCCC(O1)(C)C2CCC3(C2C(CC4C3(CC(C5C4(CCC(C5(C)C)O)C)O)C)O)C)C" # _pdbx_chem_comp_identifier.comp_id HVL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{R},5~{R},6~{S},8~{R},9~{R},10~{R},12~{R},13~{R},14~{R},17~{S})-4,4,8,10,14-pentamethyl-17-[(2~{R})-2,6,6-trimethyloxan-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1~{H}-cyclopenta[a]phenanthrene-3,6,12-triol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site HVL "Create component" 2021-02-10 PDBJ HVL "Initial release" 2022-03-23 RCSB ##