data_HZM # _chem_comp.id HZM _chem_comp.name "2-{(S)-(3-{[4-(dimethylamino)butanoyl]amino}phenyl)[2-(piperidin-1-yl)ethoxy]methyl}thieno[3,2-b]pyridine-7-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H36 N4 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2-{(S)-(3-{[(2E)-4-(dimethylamino)but-2-enoyl]amino}phenyl)[2-(piperidin-1-yl)ethoxy]methyl}thieno[3,2-b]pyridine-7-carboxylic acid, bound form" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-08-01 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 524.675 _chem_comp.one_letter_code ? _chem_comp.three_letter_code HZM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6DQB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal HZM C02 C1 C 0 1 N N N N N N -23.375 17.977 7.854 6.113 2.359 0.402 C02 HZM 1 HZM C04 C2 C 0 1 Y N N N N N -23.542 17.594 6.387 4.938 2.895 -0.316 C04 HZM 2 HZM C05 C3 C 0 1 Y N N N N N -24.115 18.510 5.515 3.744 2.150 -0.407 C05 HZM 3 HZM C06 C4 C 0 1 Y N N N N N -24.251 18.151 4.174 2.651 2.689 -1.095 C06 HZM 4 HZM C07 C5 C 0 1 Y N N N N N -24.858 19.184 3.371 1.512 1.785 -1.085 C07 HZM 5 HZM C08 C6 C 0 1 Y N N N N N -25.189 20.347 4.079 1.710 0.648 -0.446 C08 HZM 6 HZM C09 C7 C 0 1 N N S N N N -25.833 21.586 3.464 0.675 -0.438 -0.307 C09 HZM 7 HZM C10 C8 C 0 1 Y N N N N N -26.560 22.405 4.525 -0.052 -0.274 1.003 C10 HZM 8 HZM C11 C9 C 0 1 Y N N N N N -25.839 23.268 5.334 0.530 -0.719 2.176 C11 HZM 9 HZM C12 C10 C 0 1 Y N N N N N -26.495 24.020 6.295 -0.133 -0.571 3.380 C12 HZM 10 HZM C13 C11 C 0 1 Y N N N N N -27.868 23.916 6.443 -1.380 0.022 3.415 C13 HZM 11 HZM C14 C12 C 0 1 Y N N N N N -28.596 23.054 5.636 -1.968 0.469 2.239 C14 HZM 12 HZM C16 C13 C 0 1 N N N N N N -30.908 21.958 5.253 -4.078 0.913 1.234 C16 HZM 13 HZM C17 C14 C 0 1 N N N N N N -32.414 22.030 5.514 -5.393 1.648 1.217 C17 HZM 14 HZM C18 C15 C 0 1 N N N N N N -32.938 20.789 6.235 -6.157 1.298 -0.061 C18 HZM 15 HZM C19 C16 C 0 1 N N N N N N -34.245 21.070 6.980 -7.492 2.045 -0.078 C19 HZM 16 HZM C21 C17 C 0 1 N N N N N N -35.250 22.328 8.732 -9.605 2.213 -1.250 C21 HZM 17 HZM C22 C18 C 0 1 N N N N N N -33.035 21.515 8.965 -7.527 2.216 -2.493 C22 HZM 18 HZM C24 C19 C 0 1 Y N N N N N -27.938 22.307 4.667 -1.296 0.324 1.032 C24 HZM 19 HZM C26 C20 C 0 1 N N N N N N -26.229 21.238 1.183 1.440 -2.269 -1.651 C26 HZM 20 HZM C36 C21 C 0 1 Y N N N N N -23.314 16.067 4.522 3.857 4.619 -1.580 C36 HZM 21 HZM C37 C22 C 0 1 Y N N N N N -23.135 16.353 5.882 4.980 4.154 -0.917 C37 HZM 22 HZM N15 N1 N 0 1 N N N N N N -30.045 22.988 5.817 -3.231 1.069 2.271 N15 HZM 23 HZM N20 N2 N 0 1 N N N N N N -34.010 22.045 8.032 -8.226 1.708 -1.305 N20 HZM 24 HZM N35 N3 N 0 1 Y N N N N N -23.860 16.960 3.716 2.761 3.905 -1.654 N35 HZM 25 HZM O01 O1 O 0 1 N N N N N N -23.965 18.995 8.299 6.058 1.263 0.924 O01 HZM 26 HZM O03 O2 O 0 1 N N N N N N -22.640 17.288 8.600 7.247 3.083 0.474 O03 HZM 27 HZM O23 O3 O 0 1 N N N N N N -30.476 21.066 4.604 -3.781 0.180 0.314 O23 HZM 28 HZM O25 O4 O 0 1 N N N N N N -26.747 21.190 2.485 1.316 -1.714 -0.340 O25 HZM 29 HZM S34 S1 S 0 1 Y N N N N N -24.736 20.095 5.695 3.329 0.561 0.220 S34 HZM 30 HZM H1 H1 H 0 1 N N N N N N -25.042 19.071 2.313 0.575 2.027 -1.565 H1 HZM 31 HZM H2 H2 H 0 1 N N N N N N -25.042 22.209 3.021 -0.038 -0.368 -1.129 H2 HZM 32 HZM H3 H3 H 0 1 N N N N N N -24.769 23.354 5.216 1.505 -1.183 2.152 H3 HZM 33 HZM H4 H4 H 0 1 N N N N N N -25.934 24.689 6.931 0.325 -0.919 4.295 H4 HZM 34 HZM H5 H5 H 0 1 N N N N N N -28.374 24.509 7.190 -1.898 0.136 4.356 H5 HZM 35 HZM H6 H6 H 0 1 N N N N N N -32.624 22.914 6.134 -5.984 1.356 2.085 H6 HZM 36 HZM H7 H7 H 0 1 N N N N N N -32.936 22.126 4.550 -5.209 2.722 1.247 H7 HZM 37 HZM H8 H8 H 0 1 N N N N N N -33.115 19.995 5.494 -5.567 1.590 -0.929 H8 HZM 38 HZM H9 H9 H 0 1 N N N N N N -32.181 20.453 6.959 -6.341 0.224 -0.092 H9 HZM 39 HZM H10 H10 H 0 1 N N N N N N -34.990 21.466 6.274 -8.083 1.752 0.790 H10 HZM 40 HZM H11 H11 H 0 1 N N N N N N -34.621 20.136 7.424 -7.309 3.118 -0.048 H11 HZM 41 HZM H12 H12 H 0 1 N N N N N N -35.063 23.066 9.526 -9.590 3.297 -1.138 H12 HZM 42 HZM H13 H13 H 0 1 N N N N N N -35.988 22.731 8.023 -10.125 1.950 -2.171 H13 HZM 43 HZM H14 H14 H 0 1 N N N N N N -35.639 21.401 9.178 -10.121 1.767 -0.400 H14 HZM 44 HZM H15 H15 H 0 1 N N N N N N -32.854 22.250 9.763 -6.533 1.771 -2.547 H15 HZM 45 HZM H16 H16 H 0 1 N N N N N N -33.418 20.582 9.405 -8.092 1.953 -3.388 H16 HZM 46 HZM H17 H17 H 0 1 N N N N N N -32.093 21.310 8.434 -7.437 3.300 -2.426 H17 HZM 47 HZM H18 H18 H 0 1 N N N N N N -28.500 21.648 4.022 -1.748 0.675 0.116 H18 HZM 48 HZM H19 H19 H 0 1 N N N N N N -26.998 20.927 0.460 0.449 -2.396 -2.086 H19 HZM 49 HZM H20 H20 H 0 1 N N N N N N -25.897 22.260 0.948 2.028 -1.597 -2.275 H20 HZM 50 HZM H22 H22 H 0 1 N N N N N N -23.003 15.110 4.130 3.886 5.593 -2.046 H22 HZM 51 HZM H23 H23 H 0 1 N N N N N N -22.686 15.621 6.537 5.875 4.756 -0.865 H23 HZM 52 HZM H24 H24 H 0 1 N N N N N N -30.476 23.702 6.368 -3.498 1.597 3.039 H24 HZM 53 HZM H26 H26 H 0 1 N N N N N N -22.631 17.665 9.472 7.990 2.689 0.951 H26 HZM 54 HZM C27 C23 C 0 1 N N N N N N ? ? ? 2.138 -3.628 -1.566 C27 HZM 55 HZM N28 N4 N 0 1 N N N N N N ? ? ? 1.314 -4.553 -0.775 N28 HZM 56 HZM C33 C24 C 0 1 N N N N N N ? ? ? 1.909 -5.895 -0.747 C33 HZM 57 HZM C32 C25 C 0 1 N N N N N N ? ? ? 1.106 -6.791 0.199 C32 HZM 58 HZM C31 C26 C 0 1 N N N N N N ? ? ? -0.345 -6.865 -0.284 C31 HZM 59 HZM C30 C27 C 0 1 N N N N N N ? ? ? -0.926 -5.450 -0.351 C30 HZM 60 HZM C29 C28 C 0 1 N N N N N N ? ? ? -0.064 -4.594 -1.282 C29 HZM 61 HZM H21 H21 H 0 1 N N N N N N ? ? ? 2.274 -4.030 -2.569 H21 HZM 62 HZM H25 H25 H 0 1 N N N N N N ? ? ? 3.110 -3.508 -1.087 H25 HZM 63 HZM H27 H27 H 0 1 N N N N N N ? ? ? 1.893 -6.321 -1.750 H27 HZM 64 HZM H28 H28 H 0 1 N N N N N N ? ? ? 2.939 -5.828 -0.397 H28 HZM 65 HZM H29 H29 H 0 1 N N N N N N ? ? ? 1.539 -7.791 0.208 H29 HZM 66 HZM H30 H30 H 0 1 N N N N N N ? ? ? 1.133 -6.373 1.206 H30 HZM 67 HZM H31 H31 H 0 1 N N N N N N ? ? ? -0.375 -7.319 -1.275 H31 HZM 68 HZM H32 H32 H 0 1 N N N N N N ? ? ? -0.930 -7.467 0.411 H32 HZM 69 HZM H33 H33 H 0 1 N N N N N N ? ? ? -1.945 -5.493 -0.735 H33 HZM 70 HZM H34 H34 H 0 1 N N N N N N ? ? ? -0.931 -5.011 0.647 H34 HZM 71 HZM H35 H35 H 0 1 N N N N N N ? ? ? -0.467 -3.582 -1.320 H35 HZM 72 HZM H36 H36 H 0 1 N N N N N N ? ? ? -0.071 -5.025 -2.282 H36 HZM 73 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal HZM C26 O25 SING N N 1 HZM O25 C09 SING N N 2 HZM C07 C08 DOUB Y N 3 HZM C07 C06 SING Y N 4 HZM C09 C08 SING N N 5 HZM C09 C10 SING N N 6 HZM N35 C06 DOUB Y N 7 HZM N35 C36 SING Y N 8 HZM C08 S34 SING Y N 9 HZM C06 C05 SING Y N 10 HZM C36 C37 DOUB Y N 11 HZM C10 C24 DOUB Y N 12 HZM C10 C11 SING Y N 13 HZM O23 C16 DOUB N N 14 HZM C24 C14 SING Y N 15 HZM C16 C17 SING N N 16 HZM C16 N15 SING N N 17 HZM C11 C12 DOUB Y N 18 HZM C17 C18 SING N N 19 HZM C05 S34 SING Y N 20 HZM C05 C04 DOUB Y N 21 HZM C14 N15 SING N N 22 HZM C14 C13 DOUB Y N 23 HZM C37 C04 SING Y N 24 HZM C18 C19 SING N N 25 HZM C12 C13 SING Y N 26 HZM C04 C02 SING N N 27 HZM C19 N20 SING N N 28 HZM C02 O01 DOUB N N 29 HZM C02 O03 SING N N 30 HZM N20 C21 SING N N 31 HZM N20 C22 SING N N 32 HZM C07 H1 SING N N 33 HZM C09 H2 SING N N 34 HZM C11 H3 SING N N 35 HZM C12 H4 SING N N 36 HZM C13 H5 SING N N 37 HZM C17 H6 SING N N 38 HZM C17 H7 SING N N 39 HZM C18 H8 SING N N 40 HZM C18 H9 SING N N 41 HZM C19 H10 SING N N 42 HZM C19 H11 SING N N 43 HZM C21 H12 SING N N 44 HZM C21 H13 SING N N 45 HZM C21 H14 SING N N 46 HZM C22 H15 SING N N 47 HZM C22 H16 SING N N 48 HZM C22 H17 SING N N 49 HZM C24 H18 SING N N 50 HZM C26 H19 SING N N 51 HZM C26 H20 SING N N 52 HZM C36 H22 SING N N 53 HZM C37 H23 SING N N 54 HZM N15 H24 SING N N 55 HZM O03 H26 SING N N 56 HZM C26 C27 SING N N 57 HZM C27 N28 SING N N 58 HZM N28 C33 SING N N 59 HZM C33 C32 SING N N 60 HZM C32 C31 SING N N 61 HZM C31 C30 SING N N 62 HZM C30 C29 SING N N 63 HZM C29 N28 SING N N 64 HZM C27 H21 SING N N 65 HZM C27 H25 SING N N 66 HZM C33 H27 SING N N 67 HZM C33 H28 SING N N 68 HZM C32 H29 SING N N 69 HZM C32 H30 SING N N 70 HZM C31 H31 SING N N 71 HZM C31 H32 SING N N 72 HZM C30 H33 SING N N 73 HZM C30 H34 SING N N 74 HZM C29 H35 SING N N 75 HZM C29 H36 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor HZM SMILES ACDLabs 12.01 "C(=O)(O)c2c1sc(cc1ncc2)C(c3cc(ccc3)NC(CCCN(C)C)=O)OCCN4CCCCC4" HZM InChI InChI 1.03 "InChI=1S/C28H36N4O4S/c1-31(2)13-7-10-25(33)30-21-9-6-8-20(18-21)26(36-17-16-32-14-4-3-5-15-32)24-19-23-27(37-24)22(28(34)35)11-12-29-23/h6,8-9,11-12,18-19,26H,3-5,7,10,13-17H2,1-2H3,(H,30,33)(H,34,35)/t26-/m0/s1" HZM InChIKey InChI 1.03 GTUZDQNWYGEDTB-SANMLTNESA-N HZM SMILES_CANONICAL CACTVS 3.385 "CN(C)CCCC(=O)Nc1cccc(c1)[C@H](OCCN2CCCCC2)c3sc4c(c3)nccc4C(O)=O" HZM SMILES CACTVS 3.385 "CN(C)CCCC(=O)Nc1cccc(c1)[CH](OCCN2CCCCC2)c3sc4c(c3)nccc4C(O)=O" HZM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CN(C)CCCC(=O)Nc1cccc(c1)[C@@H](c2cc3c(s2)c(ccn3)C(=O)O)OCCN4CCCCC4" HZM SMILES "OpenEye OEToolkits" 2.0.6 "CN(C)CCCC(=O)Nc1cccc(c1)C(c2cc3c(s2)c(ccn3)C(=O)O)OCCN4CCCCC4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier HZM "SYSTEMATIC NAME" ACDLabs 12.01 "2-{(S)-(3-{[4-(dimethylamino)butanoyl]amino}phenyl)[2-(piperidin-1-yl)ethoxy]methyl}thieno[3,2-b]pyridine-7-carboxylic acid" HZM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-[(~{S})-[3-[4-(dimethylamino)butanoylamino]phenyl]-(2-piperidin-1-ylethoxy)methyl]thieno[3,2-b]pyridine-7-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site HZM "Create component" 2018-08-01 RCSB HZM "Modify value order" 2018-08-01 RCSB HZM "Initial release" 2018-11-21 RCSB HZM "Modify synonyms" 2021-03-13 RCSB HZM "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id HZM _pdbx_chem_comp_synonyms.name "2-{(S)-(3-{[(2E)-4-(dimethylamino)but-2-enoyl]amino}phenyl)[2-(piperidin-1-yl)ethoxy]methyl}thieno[3,2-b]pyridine-7-carboxylic acid, bound form" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id HZM _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C18 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #