data_I # _chem_comp.id I _chem_comp.name "INOSINIC ACID" _chem_comp.type "RNA LINKING" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C10 H13 N4 O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2013-06-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 348.206 _chem_comp.one_letter_code I _chem_comp.three_letter_code I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I OP3 O3P O 0 1 N Y N 23.102 7.014 5.552 -4.504 1.956 1.124 OP3 I 1 I P P P 0 1 N N N 21.666 7.423 4.970 -4.803 0.963 -0.107 P I 2 I OP1 O1P O 0 1 N N N 21.575 6.862 3.576 -5.835 -0.020 0.292 OP1 I 3 I OP2 O2P O 0 1 N N N 21.374 8.868 5.211 -5.332 1.815 -1.367 OP2 I 4 I "O5'" "O5'" O 0 1 N N N 20.691 6.537 5.854 -3.451 0.189 -0.513 "O5'" I 5 I "C5'" "C5'" C 0 1 N N N 20.871 5.133 5.876 -2.793 -0.735 0.357 "C5'" I 6 I "C4'" "C4'" C 0 1 N N R 20.206 4.534 7.092 -1.545 -1.287 -0.336 "C4'" I 7 I "O4'" "O4'" O 0 1 N N N 20.884 4.967 8.303 -0.582 -0.235 -0.519 "O4'" I 8 I "C3'" "C3'" C 0 1 N N S 18.772 4.939 7.362 -0.887 -2.363 0.549 "C3'" I 9 I "O3'" "O3'" O 0 1 N N N 17.863 4.287 6.486 -0.845 -3.616 -0.136 "O3'" I 10 I "C2'" "C2'" C 0 1 N N R 18.630 4.463 8.799 0.546 -1.829 0.792 "C2'" I 11 I "O2'" "O2'" O 0 1 N N N 18.536 3.057 8.905 1.504 -2.887 0.714 "O2'" I 12 I "C1'" "C1'" C 0 1 N N R 19.983 4.873 9.395 0.725 -0.833 -0.382 "C1'" I 13 I N9 N9 N 0 1 Y N N 19.865 6.180 10.026 1.725 0.184 -0.047 N9 I 14 I C8 C8 C 0 1 Y N N 20.230 7.380 9.498 1.483 1.386 0.550 C8 I 15 I N7 N7 N 0 1 Y N N 19.945 8.395 10.276 2.601 2.037 0.697 N7 I 16 I C5 C5 C 0 1 Y N N 19.364 7.811 11.402 3.620 1.294 0.205 C5 I 17 I C6 C6 C 0 1 N N N 18.839 8.409 12.631 5.020 1.484 0.096 C6 I 18 I O6 O6 O 0 1 N N N 18.791 9.629 12.967 5.547 2.507 0.501 O6 I 19 I N1 N1 N 0 1 N N N 18.343 7.438 13.485 5.756 0.501 -0.468 N1 I 20 I C2 C2 C 0 1 N N N 18.339 6.090 13.227 5.159 -0.633 -0.915 C2 I 21 I N3 N3 N 0 1 N N N 18.825 5.525 12.126 3.872 -0.823 -0.822 N3 I 22 I C4 C4 C 0 1 Y N N 19.316 6.438 11.261 3.071 0.099 -0.270 C4 I 23 I HOP3 HOP3 H 0 0 N N N 23.578 6.513 4.900 -3.836 2.629 0.934 HOP3 I 24 I HOP2 HOP2 H 0 0 N N N 21.149 9.287 4.389 -6.146 2.309 -1.194 HOP2 I 25 I "H5'" "H5'1" H 0 1 N N N 20.427 4.697 4.969 -2.503 -0.225 1.275 "H5'" I 26 I "H5''" "H5'2" H 0 0 N N N 21.947 4.906 5.903 -3.469 -1.556 0.595 "H5''" I 27 I "H4'" "H4'" H 0 1 N N N 20.254 3.438 7.017 -1.816 -1.713 -1.302 "H4'" I 28 I "H3'" "H3'" H 0 1 N N N 18.669 6.033 7.313 -1.425 -2.462 1.492 "H3'" I 29 I "HO3'" H3T H 0 0 N Y N 16.977 4.565 6.685 -0.440 -4.330 0.376 "HO3'" I 30 I "H2'" "H2'" H 0 1 N N N 17.805 4.983 9.307 0.612 -1.316 1.752 "H2'" I 31 I "HO2'" "HO'2" H 0 0 N N N 18.449 2.813 9.819 1.376 -3.582 1.374 "HO2'" I 32 I "H1'" "H1'" H 0 1 N N N 20.312 4.116 10.122 1.003 -1.361 -1.294 "H1'" I 33 I H8 H8 H 0 1 N N N 20.707 7.485 8.535 0.511 1.744 0.854 H8 I 34 I H1 H1 H 0 1 N N N 17.958 7.742 14.356 6.716 0.606 -0.554 H1 I 35 I H2 H2 H 0 1 N N N 17.909 5.440 13.974 5.769 -1.403 -1.362 H2 I 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I OP3 P SING N N 1 I OP3 HOP3 SING N N 2 I P OP1 DOUB N N 3 I P OP2 SING N N 4 I P "O5'" SING N N 5 I OP2 HOP2 SING N N 6 I "O5'" "C5'" SING N N 7 I "C5'" "C4'" SING N N 8 I "C5'" "H5'" SING N N 9 I "C5'" "H5''" SING N N 10 I "C4'" "O4'" SING N N 11 I "C4'" "C3'" SING N N 12 I "C4'" "H4'" SING N N 13 I "O4'" "C1'" SING N N 14 I "C3'" "O3'" SING N N 15 I "C3'" "C2'" SING N N 16 I "C3'" "H3'" SING N N 17 I "O3'" "HO3'" SING N N 18 I "C2'" "O2'" SING N N 19 I "C2'" "C1'" SING N N 20 I "C2'" "H2'" SING N N 21 I "O2'" "HO2'" SING N N 22 I "C1'" N9 SING N N 23 I "C1'" "H1'" SING N N 24 I N9 C8 SING Y N 25 I N9 C4 SING Y N 26 I C8 N7 DOUB Y N 27 I C8 H8 SING N N 28 I N7 C5 SING Y N 29 I C5 C6 SING N N 30 I C5 C4 DOUB Y N 31 I C6 O6 DOUB N N 32 I C6 N1 SING N N 33 I N1 C2 SING N N 34 I N1 H1 SING N N 35 I C2 N3 DOUB N N 36 I C2 H2 SING N N 37 I N3 C4 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I SMILES ACDLabs 12.01 "O=P(O)(O)OCC3OC(n2cnc1c2N=CNC1=O)C(O)C3O" I InChI InChI 1.03 "InChI=1S/C10H13N4O8P/c15-6-4(1-21-23(18,19)20)22-10(7(6)16)14-3-13-5-8(14)11-2-12-9(5)17/h2-4,6-7,10,15-16H,1H2,(H,11,12,17)(H2,18,19,20)/t4-,6-,7-,10+/m1/s1" I InChIKey InChI 1.03 GRSZFWQUAKGDAV-CRKDRTNXSA-N I SMILES_CANONICAL CACTVS 3.370 "O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)n2cnc3C(=O)NC=Nc23" I SMILES CACTVS 3.370 "O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)n2cnc3C(=O)NC=Nc23" I SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N=CNC2=O" I SMILES "OpenEye OEToolkits" 1.7.6 "c1nc2c(n1C3C(C(C(O3)COP(=O)(O)O)O)O)N=CNC2=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier I "SYSTEMATIC NAME" ACDLabs 12.01 "9-(5-O-phosphono-alpha-D-xylofuranosyl)-1,9-dihydro-6H-purin-6-one" I "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3S,4R,5R)-3,4-bis(oxidanyl)-5-(6-oxidanylidene-1H-purin-9-yl)oxolan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I "Create component" 1999-07-08 PDBJ I "Modify descriptor" 2011-06-04 RCSB I "Modify descriptor" 2012-01-05 RCSB I "Modify coordinates" 2012-01-05 RCSB I "Modify coordinates" 2013-06-19 RCSB #