data_I0Q # _chem_comp.id I0Q _chem_comp.name "(2R)-4-[4-[5-[4-[[4-(acetamidomethyl)piperidin-1-ium-1-yl]methyl]-6-[3,5-bis(chloranyl)phenyl]pyridin-2-yl]oxypyrimidin-2-yl]piperazin-1-ium-1-yl]-2-methyl-butanoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H42 Cl2 N7 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2022-02-08 _chem_comp.pdbx_modified_date 2022-08-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 671.637 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I0Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7QY2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I0Q CAA C1 C 0 1 N N N 55.160 -29.745 5.094 12.689 -0.849 -1.311 CAA I0Q 1 I0Q CAB C2 C 0 1 N N N 54.589 -29.228 3.766 11.311 -0.519 -1.826 CAB I0Q 2 I0Q CAE C3 C 0 1 N N N 53.448 -29.802 1.678 8.922 -0.185 -1.482 CAE I0Q 3 I0Q CAF C4 C 0 1 N N N 52.735 -31.012 1.084 7.920 -0.238 -0.327 CAF I0Q 4 I0Q CAG C5 C 0 1 N N N 51.495 -31.349 1.911 6.544 0.217 -0.822 CAG I0Q 5 I0Q CAH C6 C 0 1 N N N 50.785 -32.554 1.280 5.529 0.086 0.316 CAH I0Q 6 I0Q CAJ C7 C 0 1 N N N 51.548 -31.923 -0.929 6.753 -1.735 1.295 CAJ I0Q 7 I0Q CAK C8 C 0 1 N N N 52.306 -30.716 -0.358 7.815 -1.674 0.195 CAK I0Q 8 I0Q CAL C9 C 0 1 N N N 49.673 -33.474 -0.691 4.425 -1.447 1.791 CAL I0Q 9 I0Q CAM C10 C 0 1 Y N N 49.061 -33.245 -1.966 3.075 -1.133 1.202 CAM I0Q 10 I0Q CAN C11 C 0 1 Y N N 49.697 -33.663 -3.119 2.299 -2.132 0.637 CAN I0Q 11 I0Q CAO C12 C 0 1 Y N N 49.092 -33.446 -4.360 1.058 -1.810 0.102 CAO I0Q 12 I0Q CAQ C13 C 0 1 Y N N 47.246 -32.429 -3.366 1.327 0.416 0.666 CAQ I0Q 13 I0Q CAR C14 C 0 1 Y N N 47.818 -32.625 -2.101 2.579 0.161 1.218 CAR I0Q 14 I0Q CAS C15 C 0 1 Y N N 46.014 -31.777 -3.553 0.786 1.797 0.677 CAS I0Q 15 I0Q CAT C16 C 0 1 Y N N 45.608 -30.790 -2.658 -0.548 2.028 0.347 CAT I0Q 16 I0Q CAU C17 C 0 1 Y N N 44.405 -30.111 -2.836 -1.047 3.316 0.360 CAU I0Q 17 I0Q CAW C18 C 0 1 Y N N 43.589 -30.407 -3.920 -0.224 4.376 0.700 CAW I0Q 18 I0Q CAX C19 C 0 1 Y N N 43.995 -31.378 -4.831 1.102 4.152 1.028 CAX I0Q 19 I0Q CAZ C20 C 0 1 Y N N 45.201 -32.055 -4.651 1.609 2.867 1.024 CAZ I0Q 20 I0Q CBB C21 C 0 1 Y N N 49.196 -34.014 -6.663 -1.029 -2.817 -0.134 CBB I0Q 21 I0Q CBC C22 C 0 1 Y N N 49.824 -33.469 -7.769 -1.890 -3.711 -0.762 CBC I0Q 22 I0Q CBE C23 C 0 1 Y N N 48.112 -34.365 -9.130 -3.632 -2.884 0.494 CBE I0Q 23 I0Q CBG C24 C 0 1 Y N N 48.044 -34.758 -6.804 -1.550 -1.962 0.831 CBG I0Q 24 I0Q CBI C25 C 0 1 N N N 48.330 -34.020 -11.484 -5.297 -1.925 1.855 CBI I0Q 25 I0Q CBJ C26 C 0 1 N N N 48.361 -35.026 -12.599 -6.777 -2.035 2.228 CBJ I0Q 26 I0Q CBL C27 C 0 1 N N N 47.114 -36.363 -14.086 -7.315 -0.467 0.495 CBL I0Q 27 I0Q CBM C28 C 0 1 N N N 45.739 -36.857 -14.472 -8.261 -0.176 -0.673 CBM I0Q 28 I0Q CBN C29 C 0 1 N N R 45.788 -37.497 -15.855 -7.964 1.216 -1.234 CBN I0Q 29 I0Q CBO C30 C 0 1 N N N 46.652 -38.747 -15.910 -6.558 1.233 -1.838 CBO I0Q 30 I0Q CBP C31 C 0 1 N N N 44.346 -37.913 -16.142 -8.973 1.553 -2.302 CBP I0Q 31 I0Q CBS C32 C 0 1 N N N 46.654 -36.383 -11.696 -7.290 -2.818 0.018 CBS I0Q 32 I0Q CBT C33 C 0 1 N N N 46.445 -35.471 -10.505 -5.814 -2.713 -0.373 CBT I0Q 33 I0Q NAD N1 N 0 1 N N N 54.036 -30.158 2.987 10.261 -0.505 -0.981 NAD I0Q 34 I0Q NAI N2 N 1 1 N N N 50.360 -32.286 -0.126 5.456 -1.313 0.752 NAI I0Q 35 I0Q NAP N3 N 0 1 Y N N 47.907 -32.838 -4.468 0.613 -0.566 0.127 NAP I0Q 36 I0Q NBD N4 N 0 1 Y N N 49.244 -33.663 -9.007 -3.169 -3.716 -0.426 NBD I0Q 37 I0Q NBF N5 N 0 1 Y N N 47.512 -34.919 -8.068 -2.840 -2.023 1.116 NBF I0Q 38 I0Q NBH N6 N 0 1 N N N 47.607 -34.573 -10.332 -4.979 -2.918 0.819 NBH I0Q 39 I0Q NBK N7 N 1 1 N N N 47.025 -35.570 -12.860 -7.601 -1.803 1.034 NBK I0Q 40 I0Q OAC O1 O 0 1 N N N 54.643 -28.039 3.471 11.147 -0.268 -3.001 OAC I0Q 41 I0Q OBA O2 O 0 1 N N N 49.783 -33.853 -5.462 0.293 -2.784 -0.452 OBA I0Q 42 I0Q OBQ O3 O -1 1 N N N 44.037 -39.081 -15.827 -9.428 2.682 -2.376 OBQ I0Q 43 I0Q OBR O4 O 0 1 N N N 43.565 -37.038 -16.584 -9.334 0.697 -3.091 OBR I0Q 44 I0Q CL1 CL1 CL 0 0 N N N 43.938 -28.871 -1.708 -2.709 3.606 -0.051 CL1 I0Q 45 I0Q CL2 CL2 CL 0 0 N N N 42.976 -31.720 -6.192 2.125 5.486 1.459 CL2 I0Q 46 I0Q HAB H1 H 0 1 N N N 55.584 -28.905 5.663 12.854 -1.924 -1.377 HAB I0Q 47 I0Q HAC H2 H 0 1 N N N 54.357 -30.217 5.679 13.435 -0.329 -1.911 HAC I0Q 48 I0Q HAA H3 H 0 1 N N N 55.948 -30.485 4.891 12.773 -0.531 -0.271 HAA I0Q 49 I0Q HAF H4 H 0 1 N N N 54.247 -29.478 0.995 8.637 -0.910 -2.244 HAF I0Q 50 I0Q HAE H5 H 0 1 N N N 52.726 -28.983 1.813 8.925 0.815 -1.914 HAE I0Q 51 I0Q HAG H6 H 0 1 N N N 53.418 -31.874 1.088 8.254 0.419 0.476 HAG I0Q 52 I0Q HAH H7 H 0 1 N N N 51.794 -31.595 2.941 6.598 1.257 -1.143 HAH I0Q 53 I0Q HAI H8 H 0 1 N N N 50.814 -30.485 1.924 6.234 -0.407 -1.660 HAI I0Q 54 I0Q HAK H9 H 0 1 N N N 49.895 -32.794 1.879 5.840 0.711 1.153 HAK I0Q 55 I0Q HAJ H10 H 0 1 N N N 51.473 -33.413 1.285 4.549 0.409 -0.033 HAJ I0Q 56 I0Q HAM H11 H 0 1 N N N 51.221 -31.681 -1.951 6.676 -2.756 1.669 HAM I0Q 57 I0Q HAL H12 H 0 1 N N N 52.230 -32.785 -0.957 7.038 -1.071 2.111 HAL I0Q 58 I0Q HAO H13 H 0 1 N N N 53.197 -30.520 -0.972 7.531 -2.338 -0.622 HAO I0Q 59 I0Q HAN H14 H 0 1 N N N 51.650 -29.833 -0.371 8.777 -1.985 0.600 HAN I0Q 60 I0Q HAQ H15 H 0 1 N N N 48.891 -33.789 0.016 4.637 -0.754 2.605 HAQ I0Q 61 I0Q HAP H16 H 0 1 N N N 50.413 -34.280 -0.803 4.426 -2.468 2.174 HAP I0Q 62 I0Q HAR H17 H 0 1 N N N 50.657 -34.155 -3.062 2.656 -3.151 0.612 HAR I0Q 63 I0Q HAS H18 H 0 1 N N N 47.290 -32.292 -1.220 3.156 0.962 1.656 HAS I0Q 64 I0Q HAT H19 H 0 1 N N N 46.236 -30.548 -1.813 -1.190 1.202 0.082 HAT I0Q 65 I0Q HAW H20 H 0 1 N N N 42.650 -29.890 -4.055 -0.618 5.382 0.709 HAW I0Q 66 I0Q HAZ H21 H 0 1 N N N 45.508 -32.801 -5.369 2.644 2.693 1.280 HAZ I0Q 67 I0Q HBC H22 H 0 1 N N N 50.741 -32.908 -7.667 -1.518 -4.392 -1.513 HBC I0Q 68 I0Q HBG H23 H 0 1 N N N 47.568 -35.205 -5.944 -0.909 -1.259 1.342 HBG I0Q 69 I0Q HBJ H24 H 0 1 N N N 49.360 -33.775 -11.185 -5.091 -0.924 1.475 HBJ I0Q 70 I0Q HBI H25 H 0 1 N N N 47.822 -33.108 -11.830 -4.684 -2.111 2.738 HBI I0Q 71 I0Q HBL H26 H 0 1 N N N 49.035 -35.849 -12.321 -6.979 -3.032 2.621 HBL I0Q 72 I0Q HBK H27 H 0 1 N N N 48.734 -34.539 -13.512 -7.017 -1.290 2.986 HBK I0Q 73 I0Q HBN H28 H 0 1 N N N 47.778 -37.224 -13.918 -6.284 -0.429 0.145 HBN I0Q 74 I0Q HBM H29 H 0 1 N N N 47.520 -35.740 -14.896 -7.462 0.279 1.276 HBM I0Q 75 I0Q HBP H30 H 0 1 N N N 45.038 -36.010 -14.487 -8.114 -0.922 -1.454 HBP I0Q 76 I0Q HBO H31 H 0 1 N N N 45.399 -37.602 -13.737 -9.292 -0.214 -0.323 HBO I0Q 77 I0Q HBQ H32 H 0 1 N N N 46.128 -36.764 -16.602 -8.024 1.952 -0.432 HBQ I0Q 78 I0Q HBT H33 H 0 1 N N N 47.699 -38.479 -15.707 -6.498 0.498 -2.640 HBT I0Q 79 I0Q HBR H34 H 0 1 N N N 46.304 -39.466 -15.154 -6.346 2.225 -2.238 HBR I0Q 80 I0Q HBS H35 H 0 1 N N N 46.577 -39.201 -16.909 -5.828 0.990 -1.066 HBS I0Q 81 I0Q HBU H36 H 0 1 N N N 45.724 -36.930 -11.909 -7.911 -2.652 -0.862 HBU I0Q 82 I0Q HBV H37 H 0 1 N N N 47.459 -37.100 -11.475 -7.490 -3.810 0.422 HBV I0Q 83 I0Q HBX H38 H 0 1 N N N 45.541 -34.866 -10.666 -5.580 -3.476 -1.116 HBX I0Q 84 I0Q HBW H39 H 0 1 N N N 46.321 -36.082 -9.599 -5.617 -1.726 -0.790 HBW I0Q 85 I0Q HAD H40 H 0 1 N N N 54.019 -31.110 3.292 10.392 -0.707 -0.041 HAD I0Q 86 I0Q HBY H41 H 0 1 N Y N 49.723 -31.515 -0.126 5.216 -1.897 -0.035 HBY I0Q 87 I0Q HBZ H42 H 0 1 N Y N 46.369 -34.825 -12.980 -8.577 -1.864 1.282 HBZ I0Q 88 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I0Q OBR CBP DOUB N N 1 I0Q CBP CBN SING N N 2 I0Q CBP OBQ SING N N 3 I0Q CBO CBN SING N N 4 I0Q CBN CBM SING N N 5 I0Q CBM CBL SING N N 6 I0Q CBL NBK SING N N 7 I0Q NBK CBJ SING N N 8 I0Q NBK CBS SING N N 9 I0Q CBJ CBI SING N N 10 I0Q CBS CBT SING N N 11 I0Q CBI NBH SING N N 12 I0Q CBT NBH SING N N 13 I0Q NBH CBE SING N N 14 I0Q CBE NBD DOUB Y N 15 I0Q CBE NBF SING Y N 16 I0Q NBD CBC SING Y N 17 I0Q NBF CBG DOUB Y N 18 I0Q CBC CBB DOUB Y N 19 I0Q CBG CBB SING Y N 20 I0Q CBB OBA SING N N 21 I0Q CL2 CAX SING N N 22 I0Q OBA CAO SING N N 23 I0Q CAX CAZ DOUB Y N 24 I0Q CAX CAW SING Y N 25 I0Q CAZ CAS SING Y N 26 I0Q NAP CAO DOUB Y N 27 I0Q NAP CAQ SING Y N 28 I0Q CAO CAN SING Y N 29 I0Q CAW CAU DOUB Y N 30 I0Q CAS CAQ SING N N 31 I0Q CAS CAT DOUB Y N 32 I0Q CAQ CAR DOUB Y N 33 I0Q CAN CAM DOUB Y N 34 I0Q CAU CAT SING Y N 35 I0Q CAU CL1 SING N N 36 I0Q CAR CAM SING Y N 37 I0Q CAM CAL SING N N 38 I0Q CAJ CAK SING N N 39 I0Q CAJ NAI SING N N 40 I0Q CAL NAI SING N N 41 I0Q CAK CAF SING N N 42 I0Q NAI CAH SING N N 43 I0Q CAF CAE SING N N 44 I0Q CAF CAG SING N N 45 I0Q CAH CAG SING N N 46 I0Q CAE NAD SING N N 47 I0Q NAD CAB SING N N 48 I0Q OAC CAB DOUB N N 49 I0Q CAB CAA SING N N 50 I0Q CAA HAB SING N N 51 I0Q CAA HAC SING N N 52 I0Q CAA HAA SING N N 53 I0Q CAE HAF SING N N 54 I0Q CAE HAE SING N N 55 I0Q CAF HAG SING N N 56 I0Q CAG HAH SING N N 57 I0Q CAG HAI SING N N 58 I0Q CAH HAK SING N N 59 I0Q CAH HAJ SING N N 60 I0Q CAJ HAM SING N N 61 I0Q CAJ HAL SING N N 62 I0Q CAK HAO SING N N 63 I0Q CAK HAN SING N N 64 I0Q CAL HAQ SING N N 65 I0Q CAL HAP SING N N 66 I0Q CAN HAR SING N N 67 I0Q CAR HAS SING N N 68 I0Q CAT HAT SING N N 69 I0Q CAW HAW SING N N 70 I0Q CAZ HAZ SING N N 71 I0Q CBC HBC SING N N 72 I0Q CBG HBG SING N N 73 I0Q CBI HBJ SING N N 74 I0Q CBI HBI SING N N 75 I0Q CBJ HBL SING N N 76 I0Q CBJ HBK SING N N 77 I0Q CBL HBN SING N N 78 I0Q CBL HBM SING N N 79 I0Q CBM HBP SING N N 80 I0Q CBM HBO SING N N 81 I0Q CBN HBQ SING N N 82 I0Q CBO HBT SING N N 83 I0Q CBO HBR SING N N 84 I0Q CBO HBS SING N N 85 I0Q CBS HBU SING N N 86 I0Q CBS HBV SING N N 87 I0Q CBT HBX SING N N 88 I0Q CBT HBW SING N N 89 I0Q NAD HAD SING N N 90 I0Q NAI HBY SING N N 91 I0Q NBK HBZ SING N N 92 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I0Q InChI InChI 1.06 "InChI=1S/C33H41Cl2N7O4/c1-22(32(44)45)3-6-40-9-11-42(12-10-40)33-37-19-29(20-38-33)46-31-14-25(13-30(39-31)26-15-27(34)17-28(35)16-26)21-41-7-4-24(5-8-41)18-36-23(2)43/h13-17,19-20,22,24H,3-12,18,21H2,1-2H3,(H,36,43)(H,44,45)/p+1/t22-/m1/s1" I0Q InChIKey InChI 1.06 GOXVJENOKGAJKU-JOCHJYFZSA-O I0Q SMILES_CANONICAL CACTVS 3.385 "C[C@H](CC[NH+]1CCN(CC1)c2ncc(Oc3cc(C[NH+]4CCC(CC4)CNC(C)=O)cc(n3)c5cc(Cl)cc(Cl)c5)cn2)C([O-])=O" I0Q SMILES CACTVS 3.385 "C[CH](CC[NH+]1CCN(CC1)c2ncc(Oc3cc(C[NH+]4CCC(CC4)CNC(C)=O)cc(n3)c5cc(Cl)cc(Cl)c5)cn2)C([O-])=O" I0Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](CC[NH+]1CCN(CC1)c2ncc(cn2)Oc3cc(cc(n3)c4cc(cc(c4)Cl)Cl)C[NH+]5CCC(CC5)CNC(=O)C)C(=O)[O-]" I0Q SMILES "OpenEye OEToolkits" 2.0.7 "CC(CC[NH+]1CCN(CC1)c2ncc(cn2)Oc3cc(cc(n3)c4cc(cc(c4)Cl)Cl)C[NH+]5CCC(CC5)CNC(=O)C)C(=O)[O-]" # _pdbx_chem_comp_identifier.comp_id I0Q _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R})-4-[4-[5-[4-[[4-(acetamidomethyl)piperidin-1-ium-1-yl]methyl]-6-[3,5-bis(chloranyl)phenyl]pyridin-2-yl]oxypyrimidin-2-yl]piperazin-1-ium-1-yl]-2-methyl-butanoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I0Q "Create component" 2022-02-08 PDBE I0Q "Other modification" 2022-02-08 PDBE I0Q "Modify descriptor" 2022-04-11 PDBE I0Q "Initial release" 2022-04-20 RCSB I0Q "Modify descriptor" 2022-08-22 RCSB #