data_I0U # _chem_comp.id I0U _chem_comp.name "5-[5-bromanyl-1-[[(3~{S})-1-ethanoylpiperidin-3-yl]methyl]benzimidazol-2-yl]-1,3-dimethyl-pyridin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H25 Br N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-25 _chem_comp.pdbx_modified_date 2023-10-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 457.364 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I0U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PX8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I0U C17 C1 C 0 1 N N S 40.800 18.506 10.570 -1.451 -1.687 1.021 C17 I0U 1 I0U C26 C2 C 0 1 Y N N 37.307 21.833 7.460 2.885 1.592 -0.443 C26 I0U 2 I0U C28 C3 C 0 1 Y N N 37.160 22.864 8.370 3.872 0.848 0.162 C28 I0U 3 I0U C01 C4 C 0 1 N N N 43.937 16.297 11.981 0.788 -3.332 -1.927 C01 I0U 4 I0U C05 C5 C 0 1 N N N 42.604 16.143 12.651 -0.303 -4.127 -1.258 C05 I0U 5 I0U O06 O1 O 0 1 N N N 42.366 15.172 13.357 -0.785 -5.088 -1.819 O06 I0U 6 I0U N07 N1 N 0 1 N N N 41.642 17.093 12.422 -0.744 -3.770 -0.035 N07 I0U 7 I0U C08 C6 C 0 1 N N N 40.316 17.053 13.055 -1.727 -4.598 0.678 C08 I0U 8 I0U C11 C7 C 0 1 N N N 39.195 17.286 12.068 -2.910 -3.716 1.087 C11 I0U 9 I0U C14 C8 C 0 1 N N N 39.439 18.541 11.245 -2.395 -2.520 1.891 C14 I0U 10 I0U C19 C9 C 0 1 N N N 41.083 19.755 9.764 -0.962 -0.474 1.815 C19 I0U 11 I0U N22 N2 N 0 1 Y N N 40.059 20.011 8.744 -0.156 0.386 0.945 N22 I0U 12 I0U C23 C10 C 0 1 Y N N 39.750 19.296 7.604 -0.626 1.348 0.092 C23 I0U 13 I0U N24 N3 N 0 1 Y N N 38.715 19.786 6.953 0.378 1.920 -0.528 N24 I0U 14 I0U C25 C11 C 0 1 Y N N 38.334 20.914 7.684 1.544 1.366 -0.114 C25 I0U 15 I0U BR29 BR1 BR 0 0 N N N 35.774 24.133 8.093 5.685 1.161 -0.276 BR29 I0U 16 I0U C30 C12 C 0 1 Y N N 37.973 23.007 9.478 3.547 -0.130 1.092 C30 I0U 17 I0U C32 C13 C 0 1 Y N N 38.979 22.092 9.713 2.230 -0.370 1.423 C32 I0U 18 I0U C34 C14 C 0 1 Y N N 39.150 21.062 8.799 1.222 0.378 0.832 C34 I0U 19 I0U C35 C15 C 0 1 N N N 40.439 18.095 7.164 -2.050 1.691 -0.102 C35 I0U 20 I0U C36 C16 C 0 1 N N N 41.859 17.913 7.294 -2.801 2.241 0.963 C36 I0U 21 I0U C38 C17 C 0 1 N N N 42.476 16.778 6.887 -4.111 2.547 0.758 C38 I0U 22 I0U C39 C18 C 0 1 N N N 43.960 16.586 7.022 -4.937 3.136 1.873 C39 I0U 23 I0U C43 C19 C 0 1 N N N 41.704 15.711 6.296 -4.689 2.311 -0.503 C43 I0U 24 I0U O44 O2 O 0 1 N N N 42.171 14.636 5.924 -5.863 2.583 -0.692 O44 I0U 25 I0U N45 N4 N 0 1 N N N 40.328 15.924 6.181 -3.956 1.786 -1.502 N45 I0U 26 I0U C46 C20 C 0 1 N N N 39.529 14.847 5.594 -4.579 1.549 -2.806 C46 I0U 27 I0U C50 C21 C 0 1 N N N 39.734 17.078 6.610 -2.655 1.481 -1.322 C50 I0U 28 I0U C52 C22 C 0 1 N N N 41.871 18.313 11.636 -0.251 -2.546 0.611 C52 I0U 29 I0U H18 H1 H 0 1 N N N 40.828 17.641 9.892 -1.979 -1.350 0.129 H18 I0U 30 I0U H27 H2 H 0 1 N N N 36.651 21.742 6.607 3.145 2.352 -1.165 H27 I0U 31 I0U H03 H3 H 0 1 N N N 44.578 15.440 12.237 0.351 -2.478 -2.444 H03 I0U 32 I0U H04 H4 H 0 1 N N N 43.797 16.337 10.891 1.494 -2.980 -1.175 H04 I0U 33 I0U H02 H5 H 0 1 N N N 44.414 17.227 12.323 1.309 -3.964 -2.646 H02 I0U 34 I0U H10 H6 H 0 1 N N N 40.177 16.066 13.520 -2.075 -5.397 0.023 H10 I0U 35 I0U H09 H7 H 0 1 N N N 40.271 17.833 13.830 -1.266 -5.028 1.567 H09 I0U 36 I0U H12 H8 H 0 1 N N N 39.127 16.421 11.392 -3.425 -3.360 0.195 H12 I0U 37 I0U H13 H9 H 0 1 N N N 38.249 17.396 12.619 -3.601 -4.295 1.700 H13 I0U 38 I0U H16 H10 H 0 1 N N N 38.659 18.620 10.474 -1.860 -2.876 2.770 H16 I0U 39 I0U H15 H11 H 0 1 N N N 39.390 19.418 11.907 -3.238 -1.903 2.205 H15 I0U 40 I0U H21 H12 H 0 1 N N N 41.122 20.615 10.449 -1.820 0.087 2.185 H21 I0U 41 I0U H20 H13 H 0 1 N N N 42.057 19.640 9.265 -0.357 -0.809 2.656 H20 I0U 42 I0U H31 H14 H 0 1 N N N 37.822 23.832 10.158 4.332 -0.708 1.560 H31 I0U 43 I0U H33 H15 H 0 1 N N N 39.614 22.175 10.582 1.985 -1.133 2.147 H33 I0U 44 I0U H37 H16 H 0 1 N N N 42.451 18.704 7.729 -2.342 2.416 1.924 H37 I0U 45 I0U H42 H17 H 0 1 N N N 44.240 15.597 6.629 -4.868 4.223 1.841 H42 I0U 46 I0U H41 H18 H 0 1 N N N 44.484 17.368 6.453 -5.977 2.834 1.753 H41 I0U 47 I0U H40 H19 H 0 1 N N N 44.243 16.653 8.083 -4.562 2.776 2.831 H40 I0U 48 I0U H49 H20 H 0 1 N N N 38.471 15.148 5.565 -5.624 1.857 -2.771 H49 I0U 49 I0U H48 H21 H 0 1 N N N 39.881 14.645 4.571 -4.056 2.126 -3.569 H48 I0U 50 I0U H47 H22 H 0 1 N N N 39.635 13.938 6.204 -4.520 0.488 -3.050 H47 I0U 51 I0U H51 H23 H 0 1 N N N 38.664 17.183 6.504 -2.084 1.064 -2.139 H51 I0U 52 I0U H54 H24 H 0 1 N N N 41.861 19.180 12.313 0.375 -1.991 -0.088 H54 I0U 53 I0U H53 H25 H 0 1 N N N 42.853 18.242 11.146 0.331 -2.809 1.495 H53 I0U 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I0U C01 C05 SING N N 1 I0U C05 O06 DOUB N N 2 I0U C05 N07 SING N N 3 I0U N07 C52 SING N N 4 I0U N07 C08 SING N N 5 I0U C08 C11 SING N N 6 I0U C11 C14 SING N N 7 I0U C14 C17 SING N N 8 I0U C17 C19 SING N N 9 I0U C19 N22 SING N N 10 I0U N22 C34 SING Y N 11 I0U N22 C23 SING Y N 12 I0U C23 N24 DOUB Y N 13 I0U N24 C25 SING Y N 14 I0U C25 C34 DOUB Y N 15 I0U C25 C26 SING Y N 16 I0U C26 C28 DOUB Y N 17 I0U C28 BR29 SING N N 18 I0U C28 C30 SING Y N 19 I0U C30 C32 DOUB Y N 20 I0U C32 C34 SING Y N 21 I0U C23 C35 SING N N 22 I0U C35 C50 DOUB N N 23 I0U C35 C36 SING N N 24 I0U C36 C38 DOUB N N 25 I0U C38 C39 SING N N 26 I0U C38 C43 SING N N 27 I0U C43 O44 DOUB N N 28 I0U C43 N45 SING N N 29 I0U N45 C46 SING N N 30 I0U N45 C50 SING N N 31 I0U C17 C52 SING N N 32 I0U C17 H18 SING N N 33 I0U C26 H27 SING N N 34 I0U C01 H03 SING N N 35 I0U C01 H04 SING N N 36 I0U C01 H02 SING N N 37 I0U C08 H10 SING N N 38 I0U C08 H09 SING N N 39 I0U C11 H12 SING N N 40 I0U C11 H13 SING N N 41 I0U C14 H16 SING N N 42 I0U C14 H15 SING N N 43 I0U C19 H21 SING N N 44 I0U C19 H20 SING N N 45 I0U C30 H31 SING N N 46 I0U C32 H33 SING N N 47 I0U C36 H37 SING N N 48 I0U C39 H42 SING N N 49 I0U C39 H41 SING N N 50 I0U C39 H40 SING N N 51 I0U C46 H49 SING N N 52 I0U C46 H48 SING N N 53 I0U C46 H47 SING N N 54 I0U C50 H51 SING N N 55 I0U C52 H54 SING N N 56 I0U C52 H53 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I0U InChI InChI 1.06 "InChI=1S/C22H25BrN4O2/c1-14-9-17(13-25(3)22(14)29)21-24-19-10-18(23)6-7-20(19)27(21)12-16-5-4-8-26(11-16)15(2)28/h6-7,9-10,13,16H,4-5,8,11-12H2,1-3H3/t16-/m1/s1" I0U InChIKey InChI 1.06 TWBOQOYETRQSEE-MRXNPFEDSA-N I0U SMILES_CANONICAL CACTVS 3.385 "CN1C=C(C=C(C)C1=O)c2nc3cc(Br)ccc3n2C[C@@H]4CCCN(C4)C(C)=O" I0U SMILES CACTVS 3.385 "CN1C=C(C=C(C)C1=O)c2nc3cc(Br)ccc3n2C[CH]4CCCN(C4)C(C)=O" I0U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=CC(=CN(C1=O)C)c2nc3cc(ccc3n2C[C@@H]4CCCN(C4)C(=O)C)Br" I0U SMILES "OpenEye OEToolkits" 2.0.7 "CC1=CC(=CN(C1=O)C)c2nc3cc(ccc3n2CC4CCCN(C4)C(=O)C)Br" # _pdbx_chem_comp_identifier.comp_id I0U _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "5-[5-bromanyl-1-[[(3~{S})-1-ethanoylpiperidin-3-yl]methyl]benzimidazol-2-yl]-1,3-dimethyl-pyridin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I0U "Create component" 2023-07-25 PDBE I0U "Initial release" 2023-10-18 RCSB #