data_I1R # _chem_comp.id I1R _chem_comp.name "4-chloranyl-~{N}-[4-[5-[[(3~{S})-1-[(3-fluoranyl-2-methyl-phenyl)methyl]piperidin-3-yl]methyl]-1,2,4-oxadiazol-3-yl]phenyl]benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H28 Cl F N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-25 _chem_comp.pdbx_modified_date 2024-06-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 519.010 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I1R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PY3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I1R C7 C1 C 0 1 N N N N N N -1.425 24.419 9.038 6.447 0.045 -0.300 C7 I1R 1 I1R C6 C2 C 0 1 Y N N N N N -0.178 25.074 9.568 7.600 -0.905 -0.498 C6 I1R 2 I1R C5 C3 C 0 1 Y N N N N N 0.444 26.058 8.803 7.371 -2.178 -0.986 C5 I1R 3 I1R C4 C4 C 0 1 Y N N N N N 1.624 26.641 9.232 8.427 -3.050 -1.168 C4 I1R 4 I1R C3 C5 C 0 1 Y N N N N N 2.193 26.249 10.431 9.714 -2.651 -0.863 C3 I1R 5 I1R C2 C6 C 0 1 Y N N N N N 1.559 25.280 11.169 9.946 -1.377 -0.374 C2 I1R 6 I1R C10 C7 C 0 1 N N N N N N 0.144 21.699 6.866 4.193 -1.324 0.905 C10 I1R 7 I1R C11 C8 C 0 1 N N N N N N -1.102 20.861 6.597 3.264 -0.132 1.156 C11 I1R 8 I1R C12 C9 C 0 1 N N S N N N -2.056 20.880 7.783 3.950 1.150 0.675 C12 I1R 9 I1R C13 C10 C 0 1 N N N N N N -1.499 20.082 8.958 3.054 2.352 0.977 C13 I1R 10 I1R C14 C11 C 0 1 Y N N N N N -1.198 18.683 8.633 1.787 2.251 0.167 C14 I1R 11 I1R C16 C12 C 0 1 Y N N N N N -0.423 16.817 8.132 -0.180 1.829 -0.503 C16 I1R 12 I1R C17 C13 C 0 1 Y N N N N N 0.548 15.781 7.751 -1.579 1.341 -0.576 C17 I1R 13 I1R C18 C14 C 0 1 Y N N N N N 1.851 16.126 7.402 -2.131 0.642 0.497 C18 I1R 14 I1R C19 C15 C 0 1 Y N N N N N 2.793 15.148 7.130 -3.433 0.194 0.429 C19 I1R 15 I1R C20 C16 C 0 1 Y N N N N N 2.448 13.803 7.203 -4.195 0.439 -0.708 C20 I1R 16 I1R C22 C17 C 0 1 N N N N N N 3.502 11.587 7.558 -6.276 -0.038 0.337 C22 I1R 17 I1R C23 C18 C 0 1 Y N N N N N 4.604 10.694 7.083 -7.702 -0.413 0.247 C23 I1R 18 I1R C24 C19 C 0 1 Y N N N N N 5.182 10.825 5.822 -8.262 -0.750 -0.987 C24 I1R 19 I1R C25 C20 C 0 1 Y N N N N N 6.184 9.962 5.409 -9.594 -1.099 -1.065 C25 I1R 20 I1R C26 C21 C 0 1 Y N N N N N 6.608 8.965 6.264 -10.376 -1.117 0.079 C26 I1R 21 I1R C28 C22 C 0 1 Y N N N N N 6.056 8.813 7.518 -9.826 -0.783 1.305 C28 I1R 22 I1R C29 C23 C 0 1 Y N N N N N 5.055 9.678 7.924 -8.495 -0.437 1.396 C29 I1R 23 I1R C31 C24 C 0 1 Y N N N N N 1.146 13.455 7.549 -3.646 1.136 -1.778 C31 I1R 24 I1R C32 C25 C 0 1 Y N N N N N 0.208 14.435 7.819 -2.345 1.585 -1.715 C32 I1R 25 I1R C35 C26 C 0 1 N N N N N N -2.416 22.318 8.130 5.285 1.312 1.405 C35 I1R 26 I1R C36 C27 C 0 1 Y N N N N N 0.390 24.676 10.785 8.887 -0.501 -0.198 C36 I1R 27 I1R C37 C28 C 0 1 N N N N N N -0.297 23.661 11.667 9.138 0.889 0.328 C37 I1R 28 I1R C9 C29 C 0 1 N N N N N N -0.227 23.090 7.327 5.521 -1.089 1.628 C9 I1R 29 I1R F1 F1 F 0 1 N N N N N N 2.094 24.924 12.359 11.204 -0.985 -0.075 F1 I1R 30 I1R N15 N1 N 0 1 Y N N N N N -0.087 18.148 8.261 0.674 1.666 0.533 N15 I1R 31 I1R N21 N2 N 0 1 N N N N N N 3.413 12.796 6.952 -5.514 -0.016 -0.775 N21 I1R 32 I1R N33 N3 N 0 1 Y N N N N N -1.669 16.545 8.407 0.460 2.493 -1.430 N33 I1R 33 I1R N8 N4 N 0 1 N N N N N N -1.154 23.036 8.501 6.138 0.148 1.133 N8 I1R 34 I1R O30 O1 O 0 1 N N N N N N 2.750 11.231 8.462 -5.790 0.250 1.413 O30 I1R 35 I1R O34 O2 O 0 1 Y N N N N N -2.208 17.809 8.749 1.587 2.746 -1.059 O34 I1R 36 I1R CL27 CL1 CL 0 0 N N N N N N 7.846 7.856 5.737 -12.052 -1.557 -0.027 CL27 I1R 37 I1R H1 H1 H 0 1 N N N N N N -1.835 25.040 8.228 6.717 1.029 -0.685 H1 I1R 38 I1R H2 H2 H 0 1 N N N N N N -2.161 24.346 9.852 5.574 -0.327 -0.835 H2 I1R 39 I1R H3 H3 H 0 1 N N N N N N 0.002 26.369 7.868 6.365 -2.491 -1.224 H3 I1R 40 I1R H4 H4 H 0 1 N N N N N N 2.100 27.402 8.631 8.246 -4.045 -1.549 H4 I1R 41 I1R H5 H5 H 0 1 N N N N N N 3.114 26.695 10.778 10.540 -3.333 -1.004 H5 I1R 42 I1R H6 H6 H 0 1 N N N N N N 0.745 21.210 7.647 3.728 -2.234 1.283 H6 I1R 43 I1R H7 H7 H 0 1 N N N N N N 0.735 21.772 5.941 4.374 -1.426 -0.165 H7 I1R 44 I1R H8 H8 H 0 1 N N N N N N -1.621 21.265 5.715 2.333 -0.275 0.607 H8 I1R 45 I1R H9 H9 H 0 1 N N N N N N -0.798 19.822 6.400 3.052 -0.054 2.222 H9 I1R 46 I1R H10 H10 H 0 1 N N N N N N -2.983 20.381 7.463 4.127 1.087 -0.398 H10 I1R 47 I1R H11 H11 H 0 1 N N N N N N -0.572 20.566 9.298 2.806 2.364 2.038 H11 I1R 48 I1R H12 H12 H 0 1 N N N N N N -2.240 20.098 9.771 3.579 3.271 0.716 H12 I1R 49 I1R H13 H13 H 0 1 N N N N N N 2.130 17.168 7.343 -1.540 0.451 1.380 H13 I1R 50 I1R H14 H14 H 0 1 N N N N N N 3.800 15.431 6.860 -3.861 -0.347 1.259 H14 I1R 51 I1R H15 H15 H 0 1 N N N N N N 4.845 11.608 5.159 -7.653 -0.737 -1.879 H15 I1R 52 I1R H16 H16 H 0 1 N N N N N N 6.628 10.068 4.430 -10.028 -1.360 -2.019 H16 I1R 53 I1R H17 H17 H 0 1 N N N N N N 6.401 8.029 8.175 -10.441 -0.797 2.193 H17 I1R 54 I1R H18 H18 H 0 1 N N N N N N 4.618 9.564 8.905 -8.066 -0.181 2.354 H18 I1R 55 I1R H19 H19 H 0 1 N N N N N N 0.866 12.414 7.607 -4.240 1.325 -2.661 H19 I1R 56 I1R H20 H20 H 0 1 N N N N N N -0.799 14.151 8.086 -1.920 2.130 -2.545 H20 I1R 57 I1R H21 H21 H 0 1 N N N N N N -2.881 22.806 7.261 5.783 2.216 1.055 H21 I1R 58 I1R H22 H22 H 0 1 N N N N N N -3.117 22.333 8.978 5.106 1.388 2.477 H22 I1R 59 I1R H23 H23 H 0 1 N N N N N N 0.059 22.652 11.412 9.118 0.874 1.418 H23 I1R 60 I1R H24 H24 H 0 1 N N N N N N -0.067 23.876 12.721 10.114 1.235 -0.013 H24 I1R 61 I1R H25 H25 H 0 1 N N N N N N -1.384 23.716 11.511 8.364 1.562 -0.041 H25 I1R 62 I1R H26 H26 H 0 1 N N N N N N 0.687 23.629 7.615 5.341 -1.002 2.699 H26 I1R 63 I1R H27 H27 H 0 1 N N N N N N -0.722 23.622 6.502 6.190 -1.929 1.439 H27 I1R 64 I1R H28 H28 H 0 1 N N N N N N 4.100 12.999 6.255 -5.881 -0.316 -1.621 H28 I1R 65 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I1R C25 C24 DOUB Y N 1 I1R C25 C26 SING Y N 2 I1R CL27 C26 SING N N 3 I1R C24 C23 SING Y N 4 I1R C26 C28 DOUB Y N 5 I1R C11 C10 SING N N 6 I1R C11 C12 SING N N 7 I1R C10 C9 SING N N 8 I1R N21 C20 SING N N 9 I1R N21 C22 SING N N 10 I1R C23 C22 SING N N 11 I1R C23 C29 DOUB Y N 12 I1R C19 C20 DOUB Y N 13 I1R C19 C18 SING Y N 14 I1R C20 C31 SING Y N 15 I1R C9 N8 SING N N 16 I1R C18 C17 DOUB Y N 17 I1R C28 C29 SING Y N 18 I1R C31 C32 DOUB Y N 19 I1R C22 O30 DOUB N N 20 I1R C17 C32 SING Y N 21 I1R C17 C16 SING N N 22 I1R C12 C35 SING N N 23 I1R C12 C13 SING N N 24 I1R C35 N8 SING N N 25 I1R C16 N15 SING Y N 26 I1R C16 N33 DOUB Y N 27 I1R N15 C14 DOUB Y N 28 I1R N33 O34 SING Y N 29 I1R N8 C7 SING N N 30 I1R C14 O34 SING Y N 31 I1R C14 C13 SING N N 32 I1R C5 C4 DOUB Y N 33 I1R C5 C6 SING Y N 34 I1R C7 C6 SING N N 35 I1R C4 C3 SING Y N 36 I1R C6 C36 DOUB Y N 37 I1R C3 C2 DOUB Y N 38 I1R C36 C2 SING Y N 39 I1R C36 C37 SING N N 40 I1R C2 F1 SING N N 41 I1R C7 H1 SING N N 42 I1R C7 H2 SING N N 43 I1R C5 H3 SING N N 44 I1R C4 H4 SING N N 45 I1R C3 H5 SING N N 46 I1R C10 H6 SING N N 47 I1R C10 H7 SING N N 48 I1R C11 H8 SING N N 49 I1R C11 H9 SING N N 50 I1R C12 H10 SING N N 51 I1R C13 H11 SING N N 52 I1R C13 H12 SING N N 53 I1R C18 H13 SING N N 54 I1R C19 H14 SING N N 55 I1R C24 H15 SING N N 56 I1R C25 H16 SING N N 57 I1R C28 H17 SING N N 58 I1R C29 H18 SING N N 59 I1R C31 H19 SING N N 60 I1R C32 H20 SING N N 61 I1R C35 H21 SING N N 62 I1R C35 H22 SING N N 63 I1R C37 H23 SING N N 64 I1R C37 H24 SING N N 65 I1R C37 H25 SING N N 66 I1R C9 H26 SING N N 67 I1R C9 H27 SING N N 68 I1R N21 H28 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I1R InChI InChI 1.06 "InChI=1S/C29H28ClFN4O2/c1-19-23(5-2-6-26(19)31)18-35-15-3-4-20(17-35)16-27-33-28(34-37-27)21-9-13-25(14-10-21)32-29(36)22-7-11-24(30)12-8-22/h2,5-14,20H,3-4,15-18H2,1H3,(H,32,36)/t20-/m0/s1" I1R InChIKey InChI 1.06 USLQGCUXEGLWGH-FQEVSTJZSA-N I1R SMILES_CANONICAL CACTVS 3.385 "Cc1c(F)cccc1CN2CCC[C@H](C2)Cc3onc(n3)c4ccc(NC(=O)c5ccc(Cl)cc5)cc4" I1R SMILES CACTVS 3.385 "Cc1c(F)cccc1CN2CCC[CH](C2)Cc3onc(n3)c4ccc(NC(=O)c5ccc(Cl)cc5)cc4" I1R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(cccc1F)CN2CCC[C@H](C2)Cc3nc(no3)c4ccc(cc4)NC(=O)c5ccc(cc5)Cl" I1R SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(cccc1F)CN2CCCC(C2)Cc3nc(no3)c4ccc(cc4)NC(=O)c5ccc(cc5)Cl" # _pdbx_chem_comp_identifier.comp_id I1R _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-chloranyl-~{N}-[4-[5-[[(3~{S})-1-[(3-fluoranyl-2-methyl-phenyl)methyl]piperidin-3-yl]methyl]-1,2,4-oxadiazol-3-yl]phenyl]benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I1R "Create component" 2023-07-25 PDBE I1R "Initial release" 2024-06-19 RCSB #