data_I3D # _chem_comp.id I3D _chem_comp.name 5,6-difluoro-tryptophan _chem_comp.type non-polymer _chem_comp.pdbx_type ATOMP _chem_comp.formula "C11 H10 F2 N2 O2" _chem_comp.mon_nstd_parent_comp_id TRP _chem_comp.pdbx_synonyms "(2S)-2-azanyl-3-[5,6-bis(fluoranyl)-1H-indol-3-yl]propanoic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-02-10 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 240.206 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I3D _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7QZ9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I3D N N1 N 0 1 N N N Y Y N -8.203 27.719 -14.054 -1.780 -1.138 0.998 N I3D 1 I3D O O1 O 0 1 N N N Y N Y -6.262 26.750 -15.618 -4.139 -1.753 -0.056 O I3D 2 I3D C C1 C 0 1 N N N Y N Y -7.392 26.288 -15.865 -3.972 -0.569 0.117 C I3D 3 I3D CA C2 C 0 1 N N S Y N N -8.635 27.051 -15.300 -2.603 -0.044 0.466 CA I3D 4 I3D CB C3 C 0 1 N N N N N N -9.194 28.022 -16.342 -1.942 0.528 -0.790 CB I3D 5 I3D CG C4 C 0 1 Y N N N N N -10.563 28.514 -15.933 -0.626 1.163 -0.419 CG I3D 6 I3D CD1 C5 C 0 1 Y N N N N N -10.825 29.590 -15.136 -0.414 2.460 -0.148 CD1 I3D 7 I3D CD2 C6 C 0 1 Y N N N N N -11.806 27.923 -16.329 0.663 0.479 -0.280 CD2 I3D 8 I3D NE1 N2 N 0 1 Y N N N N N -12.196 29.708 -15.005 0.907 2.665 0.147 NE1 I3D 9 I3D CE2 C7 C 0 1 Y N N N N N -12.811 28.705 -15.721 1.593 1.472 0.075 CE2 I3D 10 I3D CE3 C8 C 0 1 Y N N N N N -12.156 26.824 -17.125 1.077 -0.847 -0.426 CE3 I3D 11 I3D CZ2 C9 C 0 1 Y N N N N N -14.154 28.375 -15.916 2.924 1.121 0.280 CZ2 I3D 12 I3D CZ3 C10 C 0 1 Y N N N N N -13.506 26.515 -17.306 2.399 -1.174 -0.220 CZ3 I3D 13 I3D CH2 C11 C 0 1 Y N N N N N -14.494 27.299 -16.696 3.320 -0.191 0.133 CH2 I3D 14 I3D FAD F1 F 0 1 N N N N N N -15.812 27.002 -16.866 4.614 -0.526 0.332 FAD I3D 15 I3D FAE F2 F 0 1 N N N N N N -13.851 25.445 -18.078 2.804 -2.455 -0.359 FAE I3D 16 I3D H H2 H 0 1 N N N Y Y N -7.849 27.036 -13.415 -1.680 -1.878 0.320 H I3D 17 I3D H2 H3 H 0 1 N Y N Y Y N -7.485 28.383 -14.264 -0.879 -0.799 1.299 H2 I3D 18 I3D HA H5 H 0 1 N N N Y N N -9.412 26.309 -15.062 -2.695 0.740 1.217 HA I3D 19 I3D HB3 H6 H 0 1 N N N N N N -9.270 27.507 -17.311 -1.769 -0.275 -1.507 HB3 I3D 20 I3D H1 H7 H 0 1 N N N N N N -8.514 28.882 -16.436 -2.595 1.278 -1.235 H1 I3D 21 I3D HD1 H8 H 0 1 N N N N N N -10.088 30.238 -14.685 -1.173 3.228 -0.162 HD1 I3D 22 I3D HE1 H9 H 0 1 N N N N N N -12.668 30.412 -14.473 1.301 3.521 0.376 HE1 I3D 23 I3D HE3 H10 H 0 1 N N N N N N -11.391 26.223 -17.593 0.365 -1.611 -0.699 HE3 I3D 24 I3D HZ2 H11 H 0 1 N N N N N N -14.927 28.969 -15.451 3.646 1.877 0.553 HZ2 I3D 25 I3D OXT O2 O 0 1 N Y N Y N Y -7.586 25.185 -16.592 -5.006 0.279 -0.001 OXT I3D 26 I3D HXT H1 H 0 1 N Y N Y N Y -6.747 24.837 -16.871 -5.865 -0.105 -0.226 HXT I3D 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I3D FAE CZ3 SING N N 1 I3D CZ3 CE3 DOUB Y N 2 I3D CZ3 CH2 SING Y N 3 I3D CE3 CD2 SING Y N 4 I3D FAD CH2 SING N N 5 I3D CH2 CZ2 DOUB Y N 6 I3D CB CG SING N N 7 I3D CB CA SING N N 8 I3D CD2 CG SING Y N 9 I3D CD2 CE2 DOUB Y N 10 I3D CG CD1 DOUB Y N 11 I3D CZ2 CE2 SING Y N 12 I3D C O DOUB N N 13 I3D C CA SING N N 14 I3D CE2 NE1 SING Y N 15 I3D CA N SING N N 16 I3D CD1 NE1 SING Y N 17 I3D N H SING N N 18 I3D N H2 SING N N 19 I3D CA HA SING N N 20 I3D CB HB3 SING N N 21 I3D CB H1 SING N N 22 I3D CD1 HD1 SING N N 23 I3D NE1 HE1 SING N N 24 I3D CE3 HE3 SING N N 25 I3D CZ2 HZ2 SING N N 26 I3D C OXT SING N N 27 I3D OXT HXT SING N N 28 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I3D InChI InChI 1.06 "InChI=1S/C11H10F2N2O2/c12-7-2-6-5(1-9(14)11(16)17)4-15-10(6)3-8(7)13/h2-4,9,15H,1,14H2,(H,16,17)/t9-/m0/s1" I3D InChIKey InChI 1.06 XVUFOZDJRWYJQL-VIFPVBQESA-N I3D SMILES_CANONICAL CACTVS 3.385 "N[C@@H](Cc1c[nH]c2cc(F)c(F)cc12)C(O)=O" I3D SMILES CACTVS 3.385 "N[CH](Cc1c[nH]c2cc(F)c(F)cc12)C(O)=O" I3D SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c2c(cc(c1F)F)[nH]cc2C[C@@H](C(=O)O)N" I3D SMILES "OpenEye OEToolkits" 2.0.7 "c1c2c(cc(c1F)F)[nH]cc2CC(C(=O)O)N" # _pdbx_chem_comp_identifier.comp_id I3D _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-azanyl-3-[5,6-bis(fluoranyl)-1~{H}-indol-3-yl]propanoic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id I3D _pdbx_chem_comp_synonyms.name "(2S)-2-azanyl-3-[5,6-bis(fluoranyl)-1H-indol-3-yl]propanoic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I3D "Create component" 2022-02-10 PDBE I3D "Modify descriptor" 2022-08-22 RCSB I3D "Initial release" 2022-11-23 RCSB I3D "Modify backbone" 2023-11-03 PDBE #