data_I3O # _chem_comp.id I3O _chem_comp.name "tert-butyl 3-[(2S,5S,8S)-14-methoxy-2-(2-methylpropyl)-4,7-bis(oxidanylidene)-3,6,17-triazatetracyclo[8.7.0.0^{3,8}.0^{11,16}]heptadeca-1(10),11,13,15-tetraen-5-yl]propanoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H35 N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-26 _chem_comp.pdbx_modified_date 2024-11-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 469.573 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I3O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PY4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I3O C10 C1 C 0 1 N N S N N N 121.810 128.472 131.860 0.700 1.434 -1.872 C10 I3O 1 I3O C13 C2 C 0 1 N N N N N N 120.753 131.667 130.389 1.277 2.549 1.734 C13 I3O 2 I3O C15 C3 C 0 1 N N N N N N 118.995 132.849 128.969 0.198 1.378 3.659 C15 I3O 3 I3O C17 C4 C 0 1 N N N N N N 119.437 129.565 132.376 -0.740 2.109 0.005 C17 I3O 4 I3O C20 C5 C 0 1 N N N N N N 118.690 129.762 134.914 -2.780 0.733 -0.005 C20 I3O 5 I3O C21 C6 C 0 1 N N N N N N 118.361 131.237 134.519 -4.146 0.542 -0.667 C21 I3O 6 I3O C22 C7 C 0 1 N N N N N N 118.199 132.218 135.737 -4.897 -0.558 0.039 C22 I3O 7 I3O C24 C8 C 0 1 N N N N N N 118.230 134.439 137.926 -8.173 -2.217 -0.254 C24 I3O 8 I3O C26 C9 C 0 1 N N N N N N 116.578 134.479 135.960 -6.946 -1.566 1.823 C26 I3O 9 I3O C01 C10 C 0 1 Y N N N N N 125.093 127.488 126.836 5.342 -2.307 -0.759 C01 I3O 10 I3O C02 C11 C 0 1 Y N N N N N 124.273 127.822 125.694 6.079 -1.740 0.273 C02 I3O 11 I3O C03 C12 C 0 1 Y N N N N N 123.052 128.481 125.927 5.676 -0.577 0.916 C03 I3O 12 I3O C04 C13 C 0 1 Y N N N N N 122.635 128.809 127.266 4.488 0.005 0.480 C04 I3O 13 I3O C05 C14 C 0 1 Y N N N N N 123.457 128.473 128.397 3.740 -0.581 -0.573 C05 I3O 14 I3O C06 C15 C 0 1 Y N N N N N 124.699 127.803 128.144 4.169 -1.753 -1.206 C06 I3O 15 I3O C07 C16 C 0 1 Y N N N N N 121.572 129.524 129.192 2.679 1.275 0.131 C07 I3O 16 I3O C08 C17 C 0 1 Y N N N N N 122.749 128.946 129.583 2.581 0.268 -0.763 C08 I3O 17 I3O C09 C18 C 0 1 N N S N N N 120.576 130.133 130.179 1.657 2.367 0.263 C09 I3O 18 I3O C11 C19 C 0 1 N N N N N N 123.136 128.849 131.022 1.452 0.101 -1.747 C11 I3O 19 I3O C12 C20 C 0 1 N N N N N N 123.820 127.840 123.293 7.608 -3.537 -0.023 C12 I3O 20 I3O C14 C21 C 0 1 N N N N N N 120.501 132.549 129.147 0.973 1.184 2.354 C14 I3O 21 I3O C16 C22 C 0 1 N N N N N N 121.300 133.868 129.251 0.132 0.356 1.380 C16 I3O 22 I3O C18 C23 C 0 1 N N N N N N 122.140 128.390 133.464 -0.580 1.220 -2.613 C18 I3O 23 I3O C19 C24 C 0 1 N N S N N N 119.591 128.942 133.878 -2.017 1.849 -0.722 C19 I3O 24 I3O C23 C25 C 0 1 N N N N N N 118.073 134.576 136.386 -6.792 -1.968 0.355 C23 I3O 25 I3O C25 C26 C 0 1 N N N N N N 118.648 135.971 135.927 -5.956 -3.246 0.261 C25 I3O 26 I3O N01 N1 N 0 1 Y N N N N N 121.464 129.464 127.776 3.818 1.125 0.880 N01 I3O 27 I3O N02 N2 N 0 1 N N N N N N 120.615 129.446 131.570 0.474 1.968 -0.530 N02 I3O 28 I3O N03 N3 N 0 1 N N N N N N 121.069 128.881 134.250 -1.789 1.406 -2.088 N03 I3O 29 I3O O01 O1 O 0 1 N N N N N N 124.675 127.505 124.390 7.232 -2.343 0.667 O01 I3O 30 I3O O02 O2 O 0 1 N N N N N N 123.176 127.948 133.865 -0.513 0.853 -3.767 O02 I3O 31 I3O O03 O3 O 0 1 N N N N N N 118.403 130.065 132.029 -0.812 2.509 1.148 O03 I3O 32 I3O O04 O4 O 0 1 N N N N N N 118.759 133.471 135.745 -6.128 -0.901 -0.372 O04 I3O 33 I3O O05 O5 O 0 1 N N N N N N 117.557 131.839 136.684 -4.392 -1.130 0.976 O05 I3O 34 I3O H1 H1 H 0 1 N N N N N N 121.503 127.464 131.545 1.318 2.136 -2.431 H1 I3O 35 I3O H2 H2 H 0 1 N N N N N N 121.785 131.845 130.725 2.105 3.015 2.268 H2 I3O 36 I3O H3 H3 H 0 1 N N N N N N 120.052 131.983 131.175 0.394 3.185 1.804 H3 I3O 37 I3O H4 H4 H 0 1 N N N N N N 118.438 131.903 128.896 -0.019 0.406 4.101 H4 I3O 38 I3O H5 H5 H 0 1 N N N N N N 118.631 133.423 129.834 0.796 1.968 4.353 H5 I3O 39 I3O H6 H6 H 0 1 N N N N N N 118.844 133.435 128.050 -0.737 1.900 3.452 H6 I3O 40 I3O H7 H7 H 0 1 N N N N N N 117.737 129.224 135.030 -2.918 1.001 1.042 H7 I3O 41 I3O H8 H8 H 0 1 N N N N N N 119.220 129.782 135.878 -2.212 -0.195 -0.071 H8 I3O 42 I3O H9 H9 H 0 1 N N N N N N 119.176 131.612 133.882 -4.714 1.470 -0.602 H9 I3O 43 I3O H10 H10 H 0 1 N N N N N N 117.420 131.238 133.949 -4.008 0.273 -1.714 H10 I3O 44 I3O H11 H11 H 0 1 N N N N N N 117.713 135.273 138.423 -8.769 -1.307 -0.187 H11 I3O 45 I3O H12 H12 H 0 1 N N N N N N 117.791 133.486 138.256 -8.063 -2.504 -1.300 H12 I3O 46 I3O H13 H13 H 0 1 N N N N N N 119.298 134.461 138.189 -8.672 -3.018 0.292 H13 I3O 47 I3O H14 H14 H 0 1 N N N N N N 116.010 135.300 136.422 -7.445 -2.367 2.369 H14 I3O 48 I3O H15 H15 H 0 1 N N N N N N 116.503 134.553 134.865 -5.962 -1.389 2.257 H15 I3O 49 I3O H16 H16 H 0 1 N N N N N N 116.164 133.515 136.291 -7.542 -0.656 1.890 H16 I3O 50 I3O H17 H17 H 0 1 N N N N N N 126.034 126.982 126.678 5.703 -3.212 -1.224 H17 I3O 51 I3O H18 H18 H 0 1 N N N N N N 122.420 128.744 125.092 6.257 -0.144 1.717 H18 I3O 52 I3O H19 H19 H 0 1 N N N N N N 125.340 127.537 128.972 3.602 -2.200 -2.009 H19 I3O 53 I3O H20 H20 H 0 1 N N N N N N 119.568 129.977 129.768 2.058 3.299 -0.134 H20 I3O 54 I3O H21 H21 H 0 1 N N N N N N 123.898 128.066 131.154 0.770 -0.672 -1.393 H21 I3O 55 I3O H22 H22 H 0 1 N N N N N N 123.537 129.813 131.368 1.855 -0.183 -2.720 H22 I3O 56 I3O H23 H23 H 0 1 N N N N N N 124.289 127.521 122.351 8.544 -3.915 0.389 H23 I3O 57 I3O H24 H24 H 0 1 N N N N N N 122.853 127.329 123.412 6.827 -4.288 0.100 H24 I3O 58 I3O H25 H25 H 0 1 N N N N N N 123.660 128.928 123.272 7.739 -3.319 -1.082 H25 I3O 59 I3O H26 H26 H 0 1 N N N N N N 120.851 132.003 128.259 1.908 0.663 2.561 H26 I3O 60 I3O H27 H27 H 0 1 N N N N N N 122.369 133.641 129.377 0.573 0.409 0.385 H27 I3O 61 I3O H28 H28 H 0 1 N N N N N N 121.156 134.457 128.333 0.108 -0.682 1.712 H28 I3O 62 I3O H29 H29 H 0 1 N N N N N N 120.943 134.445 130.117 -0.883 0.752 1.349 H29 I3O 63 I3O H30 H30 H 0 1 N N N N N N 119.201 127.914 133.843 -2.624 2.755 -0.709 H30 I3O 64 I3O H31 H31 H 0 1 N N N N N N 118.101 136.779 136.435 -6.454 -4.047 0.807 H31 I3O 65 I3O H32 H32 H 0 1 N N N N N N 119.715 136.031 136.187 -5.846 -3.533 -0.785 H32 I3O 66 I3O H33 H33 H 0 1 N N N N N N 118.529 136.076 134.839 -4.971 -3.069 0.695 H33 I3O 67 I3O H34 H34 H 0 1 N N N N N N 120.704 129.817 127.230 4.103 1.724 1.587 H34 I3O 68 I3O H35 H35 H 0 1 N N N N N N 121.310 129.229 135.156 -2.562 1.237 -2.648 H35 I3O 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I3O C12 O01 SING N N 1 I3O O01 C02 SING N N 2 I3O C02 C03 DOUB Y N 3 I3O C02 C01 SING Y N 4 I3O C03 C04 SING Y N 5 I3O C01 C06 DOUB Y N 6 I3O C04 N01 SING Y N 7 I3O C04 C05 DOUB Y N 8 I3O N01 C07 SING Y N 9 I3O C06 C05 SING Y N 10 I3O C05 C08 SING Y N 11 I3O C15 C14 SING N N 12 I3O C14 C16 SING N N 13 I3O C14 C13 SING N N 14 I3O C07 C08 DOUB Y N 15 I3O C07 C09 SING N N 16 I3O C08 C11 SING N N 17 I3O C09 C13 SING N N 18 I3O C09 N02 SING N N 19 I3O C11 C10 SING N N 20 I3O N02 C10 SING N N 21 I3O N02 C17 SING N N 22 I3O C10 C18 SING N N 23 I3O O03 C17 DOUB N N 24 I3O C17 C19 SING N N 25 I3O C18 O02 DOUB N N 26 I3O C18 N03 SING N N 27 I3O C19 N03 SING N N 28 I3O C19 C20 SING N N 29 I3O C21 C20 SING N N 30 I3O C21 C22 SING N N 31 I3O C22 O04 SING N N 32 I3O C22 O05 DOUB N N 33 I3O O04 C23 SING N N 34 I3O C25 C23 SING N N 35 I3O C26 C23 SING N N 36 I3O C23 C24 SING N N 37 I3O C10 H1 SING N N 38 I3O C13 H2 SING N N 39 I3O C13 H3 SING N N 40 I3O C15 H4 SING N N 41 I3O C15 H5 SING N N 42 I3O C15 H6 SING N N 43 I3O C20 H7 SING N N 44 I3O C20 H8 SING N N 45 I3O C21 H9 SING N N 46 I3O C21 H10 SING N N 47 I3O C24 H11 SING N N 48 I3O C24 H12 SING N N 49 I3O C24 H13 SING N N 50 I3O C26 H14 SING N N 51 I3O C26 H15 SING N N 52 I3O C26 H16 SING N N 53 I3O C01 H17 SING N N 54 I3O C03 H18 SING N N 55 I3O C06 H19 SING N N 56 I3O C09 H20 SING N N 57 I3O C11 H21 SING N N 58 I3O C11 H22 SING N N 59 I3O C12 H23 SING N N 60 I3O C12 H24 SING N N 61 I3O C12 H25 SING N N 62 I3O C14 H26 SING N N 63 I3O C16 H27 SING N N 64 I3O C16 H28 SING N N 65 I3O C16 H29 SING N N 66 I3O C19 H30 SING N N 67 I3O C25 H31 SING N N 68 I3O C25 H32 SING N N 69 I3O C25 H33 SING N N 70 I3O N01 H34 SING N N 71 I3O N03 H35 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I3O InChI InChI 1.06 "InChI=1S/C26H35N3O5/c1-14(2)11-20-23-17(16-8-7-15(33-6)12-19(16)27-23)13-21-24(31)28-18(25(32)29(20)21)9-10-22(30)34-26(3,4)5/h7-8,12,14,18,20-21,27H,9-11,13H2,1-6H3,(H,28,31)/t18-,20-,21-/m0/s1" I3O InChIKey InChI 1.06 NXNRAECHCJZNRF-JBACZVJFSA-N I3O SMILES_CANONICAL CACTVS 3.385 "COc1ccc2c([nH]c3[C@H](CC(C)C)N4[C@@H](Cc23)C(=O)N[C@@H](CCC(=O)OC(C)(C)C)C4=O)c1" I3O SMILES CACTVS 3.385 "COc1ccc2c([nH]c3[CH](CC(C)C)N4[CH](Cc23)C(=O)N[CH](CCC(=O)OC(C)(C)C)C4=O)c1" I3O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@H]1c2c(c3ccc(cc3[nH]2)OC)C[C@@H]4N1C(=O)[C@@H](NC4=O)CCC(=O)OC(C)(C)C" I3O SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC1c2c(c3ccc(cc3[nH]2)OC)CC4N1C(=O)C(NC4=O)CCC(=O)OC(C)(C)C" # _pdbx_chem_comp_identifier.comp_id I3O _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{tert}-butyl 3-[(2~{S},5~{S},8~{S})-14-methoxy-2-(2-methylpropyl)-4,7-bis(oxidanylidene)-3,6,17-triazatetracyclo[8.7.0.0^{3,8}.0^{11,16}]heptadeca-1(10),11,13,15-tetraen-5-yl]propanoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I3O "Create component" 2023-07-26 PDBE I3O "Initial release" 2024-11-06 RCSB #