data_I4L
#
_chem_comp.id I4L
_chem_comp.name "(2~{S})-2-[2-[4-[3,4-bis(oxidanyl)-9,10-bis(oxidanylidene)anthracen-2-yl]sulfonylpiperazin-1-yl]-2-oxidanylidene-ethyl]-2-oxidanyl-butanedioic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H22 N2 O12 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-02-10
_chem_comp.pdbx_modified_date 2022-08-22
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 562.503
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code I4L
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7QZU
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
I4L C1 C1 C 0 1 Y N N -8.840 -59.663 41.344 -2.287 0.042 -1.554 C1 I4L 1
I4L C2 C2 C 0 1 Y N N -10.235 -59.482 41.477 -3.289 -0.933 -1.502 C2 I4L 2
I4L O2 O1 O 0 1 N N N -10.833 -58.539 40.689 -3.256 -1.991 -2.350 O2 I4L 3
I4L C3 C3 C 0 1 Y N N -8.907 -61.257 43.179 -3.340 1.252 0.237 C3 I4L 4
I4L O3 O2 O 0 1 N N N -10.404 -62.682 45.060 -5.352 1.213 2.205 O3 I4L 5
I4L C4 C4 C 0 1 Y N N -10.286 -61.106 43.306 -4.346 0.293 0.304 C4 I4L 6
I4L O4 O3 O 0 1 N N N -13.070 -59.368 41.772 -5.262 -2.896 -1.063 O4 I4L 7
I4L C5 C5 C 0 1 Y N N -10.974 -60.221 42.450 -4.322 -0.811 -0.573 C5 I4L 8
I4L C6 C6 C 0 1 N N N -12.452 -60.114 42.522 -5.391 -1.826 -0.501 C6 I4L 9
I4L O6 O4 O 0 1 N N N -7.995 -62.021 36.535 6.173 -1.249 2.305 O6 I4L 10
I4L O5 O5 O 0 1 N N N -5.928 -61.748 35.760 5.162 -2.439 0.741 O5 I4L 11
I4L O1 O6 O 0 1 N N N -8.154 -59.005 40.357 -1.282 -0.068 -2.460 O1 I4L 12
I4L O11 O7 O 0 1 N N N -6.032 -61.269 43.475 -1.339 3.288 0.255 O11 I4L 13
I4L S S1 S 0 1 N N N -6.428 -60.767 42.197 -1.050 2.343 -0.765 S I4L 14
I4L O O8 O 0 1 N N N -5.864 -59.549 41.706 -0.914 2.695 -2.135 O I4L 15
I4L N N1 N 0 1 N N N -6.064 -61.925 41.109 0.367 1.604 -0.330 N I4L 16
I4L C17 C7 C 0 1 N N N -5.800 -61.546 39.710 0.789 1.565 1.077 C17 I4L 17
I4L C16 C8 C 0 1 N N N -4.949 -62.624 39.061 2.198 2.161 1.182 C16 I4L 18
I4L N1 N2 N 0 1 N N N -5.610 -63.935 39.162 3.053 1.527 0.169 N1 I4L 19
I4L C18 C9 C 0 1 N N N -5.931 -64.806 38.173 4.203 0.920 0.524 C18 I4L 20
I4L O10 O9 O 0 1 N N N -6.504 -65.861 38.405 4.541 0.894 1.688 O10 I4L 21
I4L C19 C10 C 0 1 N N N -5.602 -64.504 36.727 5.070 0.275 -0.527 C19 I4L 22
I4L C20 C11 C 0 1 N N S -6.752 -63.973 35.857 6.306 -0.337 0.137 C20 I4L 23
I4L O9 O10 O 0 1 N N N -7.950 -64.669 36.205 7.047 0.689 0.800 O9 I4L 24
I4L C22 C12 C 0 1 N N N -6.398 -64.283 34.394 7.185 -0.992 -0.930 C22 I4L 25
I4L C23 C13 C 0 1 N N N -7.378 -63.802 33.351 8.338 -1.699 -0.265 C23 I4L 26
I4L O8 O11 O 0 1 N N N -8.532 -63.520 33.596 8.445 -1.681 0.938 O8 I4L 27
I4L O7 O12 O 0 1 N N N -6.859 -63.731 32.146 9.246 -2.350 -1.010 O7 I4L 28
I4L C21 C14 C 0 1 N N N -6.965 -62.474 36.078 5.875 -1.375 1.140 C21 I4L 29
I4L C15 C15 C 0 1 N N N -5.891 -64.280 40.563 2.631 1.566 -1.238 C15 I4L 30
I4L C14 C16 C 0 1 N N N -6.755 -63.222 41.206 1.222 0.970 -1.344 C14 I4L 31
I4L C C17 C 0 1 Y N N -8.192 -60.554 42.220 -2.319 1.123 -0.688 C I4L 32
I4L C13 C18 C 0 1 N N N -11.009 -61.925 44.309 -5.440 0.422 1.286 C13 I4L 33
I4L C12 C19 C 0 1 Y N N -12.484 -61.814 44.368 -6.645 -0.423 1.139 C12 I4L 34
I4L C11 C20 C 0 1 Y N N -13.200 -62.615 45.257 -7.801 -0.139 1.858 C11 I4L 35
I4L C10 C21 C 0 1 Y N N -14.584 -62.581 45.260 -8.919 -0.942 1.709 C10 I4L 36
I4L C9 C22 C 0 1 Y N N -15.263 -61.757 44.391 -8.895 -2.025 0.850 C9 I4L 37
I4L C8 C23 C 0 1 Y N N -14.571 -60.939 43.515 -7.753 -2.321 0.125 C8 I4L 38
I4L C7 C24 C 0 1 Y N N -13.177 -60.956 43.499 -6.621 -1.525 0.264 C7 I4L 39
I4L H1 H1 H 0 1 N N N -11.772 -58.553 40.835 -2.772 -2.755 -2.008 H1 I4L 40
I4L H2 H2 H 0 1 N N N -8.385 -61.934 43.839 -3.356 2.099 0.908 H2 I4L 41
I4L H17 H3 H 0 1 N N N -6.113 -60.834 35.942 4.909 -3.078 1.421 H17 I4L 42
I4L H H4 H 0 1 N N N -7.225 -59.019 40.554 -1.468 0.359 -3.307 H I4L 43
I4L H13 H5 H 0 1 N N N -5.264 -60.586 39.682 0.098 2.151 1.682 H13 I4L 44
I4L H14 H6 H 0 1 N N N -6.752 -61.450 39.167 0.798 0.533 1.428 H14 I4L 45
I4L H11 H7 H 0 1 N N N -3.974 -62.670 39.569 2.156 3.235 1.005 H11 I4L 46
I4L H12 H8 H 0 1 N N N -4.798 -62.376 38.000 2.604 1.967 2.175 H12 I4L 47
I4L H16 H9 H 0 1 N N N -5.237 -65.434 36.266 4.505 -0.508 -1.033 H16 I4L 48
I4L H15 H10 H 0 1 N N N -4.801 -63.751 36.717 5.381 1.026 -1.253 H15 I4L 49
I4L H21 H11 H 0 1 N N N -8.600 -64.048 36.512 7.356 1.393 0.213 H21 I4L 50
I4L H19 H12 H 0 1 N N N -6.312 -65.375 34.294 6.595 -1.713 -1.495 H19 I4L 51
I4L H18 H13 H 0 1 N N N -5.425 -63.818 34.179 7.569 -0.227 -1.605 H18 I4L 52
I4L H20 H14 H 0 1 N N N -7.521 -63.433 31.533 9.967 -2.788 -0.538 H20 I4L 53
I4L H10 H15 H 0 1 N N N -6.415 -65.246 40.600 2.619 2.598 -1.589 H10 I4L 54
I4L H9 H16 H 0 1 N N N -4.942 -64.356 41.114 3.322 0.979 -1.844 H9 I4L 55
I4L H8 H17 H 0 1 N N N -7.722 -63.166 40.684 1.268 -0.104 -1.164 H8 I4L 56
I4L H7 H18 H 0 1 N N N -6.923 -63.474 42.264 0.814 1.159 -2.337 H7 I4L 57
I4L H6 H19 H 0 1 N N N -12.675 -63.262 45.944 -7.826 0.705 2.531 H6 I4L 58
I4L H5 H20 H 0 1 N N N -15.135 -63.205 45.949 -9.816 -0.721 2.268 H5 I4L 59
I4L H4 H21 H 0 1 N N N -16.343 -61.749 44.393 -9.773 -2.644 0.743 H4 I4L 60
I4L H3 H22 H 0 1 N N N -15.111 -60.287 42.844 -7.740 -3.169 -0.544 H3 I4L 61
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
I4L O7 C23 SING N N 1
I4L C23 O8 DOUB N N 2
I4L C23 C22 SING N N 3
I4L C22 C20 SING N N 4
I4L O5 C21 SING N N 5
I4L C20 C21 SING N N 6
I4L C20 O9 SING N N 7
I4L C20 C19 SING N N 8
I4L C21 O6 DOUB N N 9
I4L C19 C18 SING N N 10
I4L C18 O10 DOUB N N 11
I4L C18 N1 SING N N 12
I4L C16 N1 SING N N 13
I4L C16 C17 SING N N 14
I4L N1 C15 SING N N 15
I4L C17 N SING N N 16
I4L O1 C1 SING N N 17
I4L C15 C14 SING N N 18
I4L O2 C2 SING N N 19
I4L N C14 SING N N 20
I4L N S SING N N 21
I4L C1 C2 DOUB Y N 22
I4L C1 C SING Y N 23
I4L C2 C5 SING Y N 24
I4L O S DOUB N N 25
I4L O4 C6 DOUB N N 26
I4L S C SING N N 27
I4L S O11 DOUB N N 28
I4L C C3 DOUB Y N 29
I4L C5 C6 SING N N 30
I4L C5 C4 DOUB Y N 31
I4L C6 C7 SING N N 32
I4L C3 C4 SING Y N 33
I4L C4 C13 SING N N 34
I4L C7 C8 DOUB Y N 35
I4L C7 C12 SING Y N 36
I4L C8 C9 SING Y N 37
I4L C13 C12 SING N N 38
I4L C13 O3 DOUB N N 39
I4L C12 C11 DOUB Y N 40
I4L C9 C10 DOUB Y N 41
I4L C11 C10 SING Y N 42
I4L O2 H1 SING N N 43
I4L C3 H2 SING N N 44
I4L O5 H17 SING N N 45
I4L O1 H SING N N 46
I4L C17 H13 SING N N 47
I4L C17 H14 SING N N 48
I4L C16 H11 SING N N 49
I4L C16 H12 SING N N 50
I4L C19 H16 SING N N 51
I4L C19 H15 SING N N 52
I4L O9 H21 SING N N 53
I4L C22 H19 SING N N 54
I4L C22 H18 SING N N 55
I4L O7 H20 SING N N 56
I4L C15 H10 SING N N 57
I4L C15 H9 SING N N 58
I4L C14 H8 SING N N 59
I4L C14 H7 SING N N 60
I4L C11 H6 SING N N 61
I4L C10 H5 SING N N 62
I4L C9 H4 SING N N 63
I4L C8 H3 SING N N 64
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
I4L InChI InChI 1.06 "InChI=1S/C24H22N2O12S/c27-16(10-24(36,23(34)35)11-17(28)29)25-5-7-26(8-6-25)39(37,38)15-9-14-18(22(33)21(15)32)20(31)13-4-2-1-3-12(13)19(14)30/h1-4,9,32-33,36H,5-8,10-11H2,(H,28,29)(H,34,35)/t24-/m0/s1"
I4L InChIKey InChI 1.06 PYHLNZSMOIJZLQ-DEOSSOPVSA-N
I4L SMILES_CANONICAL CACTVS 3.385 "OC(=O)C[C@@](O)(CC(=O)N1CCN(CC1)[S](=O)(=O)c2cc3C(=O)c4ccccc4C(=O)c3c(O)c2O)C(O)=O"
I4L SMILES CACTVS 3.385 "OC(=O)C[C](O)(CC(=O)N1CCN(CC1)[S](=O)(=O)c2cc3C(=O)c4ccccc4C(=O)c3c(O)c2O)C(O)=O"
I4L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)C(=O)c3cc(c(c(c3C2=O)O)O)S(=O)(=O)N4CCN(CC4)C(=O)C[C@](CC(=O)O)(C(=O)O)O"
I4L SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)C(=O)c3cc(c(c(c3C2=O)O)O)S(=O)(=O)N4CCN(CC4)C(=O)CC(CC(=O)O)(C(=O)O)O"
#
_pdbx_chem_comp_identifier.comp_id I4L
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "(2~{S})-2-[2-[4-[3,4-bis(oxidanyl)-9,10-bis(oxidanylidene)anthracen-2-yl]sulfonylpiperazin-1-yl]-2-oxidanylidene-ethyl]-2-oxidanyl-butanedioic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
I4L "Create component" 2022-02-10 PDBE
I4L "Initial release" 2022-04-06 RCSB
I4L "Modify descriptor" 2022-08-22 RCSB
#