data_I4Q # _chem_comp.id I4Q _chem_comp.name "ethyl (2~{S})-2-benzamido-5-carbamimidamido-pentanoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H22 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-06-03 _chem_comp.pdbx_modified_date 2024-08-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 306.360 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I4Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7XXQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I4Q O3 O1 O 0 1 N N N N N N 19.369 18.019 10.020 2.292 -0.295 1.627 O3 I4Q 1 I4Q O2 O2 O 0 1 N N N N N N 19.497 19.428 14.128 1.689 -2.444 -0.837 O2 I4Q 2 I4Q O1 O3 O 0 1 N N N N N N 20.317 18.308 12.361 0.080 -3.627 0.109 O1 I4Q 3 I4Q C11 C1 C 0 1 Y N N N N N 16.070 17.671 8.991 3.967 1.820 0.912 C11 I4Q 4 I4Q C10 C2 C 0 1 Y N N N N N 17.351 17.152 9.145 2.846 1.446 0.170 C10 I4Q 5 I4Q C1 C3 C 0 1 N N N N N N 22.157 17.154 13.228 -0.117 -6.052 0.007 C1 I4Q 6 I4Q C2 C4 C 0 1 N N N N N N 21.687 18.485 12.811 0.701 -4.830 -0.415 C2 I4Q 7 I4Q C3 C5 C 0 1 N N N N N N 19.332 18.884 13.061 0.679 -2.459 -0.174 C3 I4Q 8 I4Q C4 C6 C 0 1 N N S N N N 17.998 18.846 12.302 0.092 -1.168 0.336 C4 I4Q 9 I4Q C5 C7 C 0 1 N N N N N N 16.788 19.131 13.206 -1.325 -1.000 -0.216 C5 I4Q 10 I4Q C6 C8 C 0 1 N N N N N N 15.537 19.358 12.370 -1.967 0.245 0.398 C6 I4Q 11 I4Q C7 C9 C 0 1 N N N N N N 14.631 20.524 12.713 -3.384 0.414 -0.154 C7 I4Q 12 I4Q N1 N1 N 0 1 N N N N N N 13.653 20.834 11.658 -3.999 1.607 0.435 N1 I4Q 13 I4Q C8 C10 C 0 1 N N N N N N 12.439 21.332 11.883 -5.280 1.962 0.086 C8 I4Q 14 I4Q N2 N2 N 0 1 N N N N N N 11.989 21.415 13.119 -5.985 1.199 -0.815 N2 I4Q 15 I4Q N3 N3 N 0 1 N N N N N N 11.678 21.764 10.892 -5.827 3.023 0.610 N3 I4Q 16 I4Q N4 N4 N 0 1 N N N N N N 17.797 17.620 11.527 0.924 -0.046 -0.105 N4 I4Q 17 I4Q C9 C11 C 0 1 N N N N N N 18.264 17.552 10.279 2.006 0.313 0.614 C9 I4Q 18 I4Q C12 C12 C 0 1 Y N N N N N 15.314 17.343 7.878 4.744 2.882 0.495 C12 I4Q 19 I4Q C13 C13 C 0 1 Y N N N N N 15.825 16.537 6.886 4.412 3.575 -0.656 C13 I4Q 20 I4Q C14 C14 C 0 1 Y N N N N N 17.104 16.050 7.007 3.302 3.209 -1.396 C14 I4Q 21 I4Q C15 C15 C 0 1 Y N N N N N 17.870 16.368 8.119 2.521 2.146 -0.993 C15 I4Q 22 I4Q H1 H1 H 0 1 N N N N N N 15.663 18.332 9.742 4.225 1.282 1.812 H1 I4Q 23 I4Q H2 H2 H 0 1 N N N N N N 23.196 17.226 13.581 -0.155 -6.106 1.095 H2 I4Q 24 I4Q H3 H3 H 0 1 N N N N N N 21.519 16.778 14.041 -1.130 -5.965 -0.387 H3 I4Q 25 I4Q H4 H4 H 0 1 N N N N N N 22.107 16.463 12.373 0.349 -6.955 -0.386 H4 I4Q 26 I4Q H5 H5 H 0 1 N N N N N N 22.311 18.870 11.991 0.739 -4.776 -1.503 H5 I4Q 27 I4Q H6 H6 H 0 1 N N N N N N 21.723 19.185 13.659 1.714 -4.918 -0.020 H6 I4Q 28 I4Q H7 H7 H 0 1 N N N N N N 18.037 19.675 11.580 0.057 -1.190 1.425 H7 I4Q 29 I4Q H8 H8 H 0 1 N N N N N N 16.626 18.272 13.874 -1.282 -0.889 -1.300 H8 I4Q 30 I4Q H9 H9 H 0 1 N N N N N N 16.989 20.030 13.807 -1.920 -1.878 0.036 H9 I4Q 31 I4Q H10 H10 H 0 1 N N N N N N 14.929 18.444 12.443 -2.010 0.135 1.482 H10 I4Q 32 I4Q H11 H11 H 0 1 N N N N N N 15.865 19.498 11.329 -1.372 1.123 0.146 H11 I4Q 33 I4Q H12 H12 H 0 1 N N N N N N 15.256 21.413 12.881 -3.341 0.525 -1.237 H12 I4Q 34 I4Q H13 H13 H 0 1 N N N N N N 14.083 20.281 13.635 -3.979 -0.464 0.099 H13 I4Q 35 I4Q H14 H14 H 0 1 N N N N N N 13.918 20.659 10.710 -3.502 2.145 1.070 H14 I4Q 36 I4Q H15 H15 H 0 1 N N N N N N 12.558 21.105 13.880 -5.578 0.410 -1.204 H15 I4Q 37 I4Q H16 H16 H 0 1 N N N N N N 11.078 21.788 13.295 -6.889 1.451 -1.061 H16 I4Q 38 I4Q H17 H17 H 0 1 N N N N N N 10.804 22.122 11.220 -6.731 3.275 0.364 H17 I4Q 39 I4Q H19 H19 H 0 1 N N N N N N 17.315 16.842 11.929 0.696 0.439 -0.913 H19 I4Q 40 I4Q H20 H20 H 0 1 N N N N N N 14.308 17.725 7.787 5.611 3.173 1.068 H20 I4Q 41 I4Q H21 H21 H 0 1 N N N N N N 15.227 16.290 6.021 5.020 4.409 -0.975 H21 I4Q 42 I4Q H22 H22 H 0 1 N N N N N N 17.514 15.417 6.234 3.049 3.754 -2.293 H22 I4Q 43 I4Q H23 H23 H 0 1 N N N N N N 18.884 16.002 8.189 1.655 1.861 -1.572 H23 I4Q 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I4Q C13 C14 DOUB Y N 1 I4Q C13 C12 SING Y N 2 I4Q C14 C15 SING Y N 3 I4Q C12 C11 DOUB Y N 4 I4Q C15 C10 DOUB Y N 5 I4Q C11 C10 SING Y N 6 I4Q C10 C9 SING N N 7 I4Q O3 C9 DOUB N N 8 I4Q C9 N4 SING N N 9 I4Q N3 C8 DOUB N N 10 I4Q N4 C4 SING N N 11 I4Q N1 C8 SING N N 12 I4Q N1 C7 SING N N 13 I4Q C8 N2 SING N N 14 I4Q C4 C3 SING N N 15 I4Q C4 C5 SING N N 16 I4Q O1 C2 SING N N 17 I4Q O1 C3 SING N N 18 I4Q C6 C7 SING N N 19 I4Q C6 C5 SING N N 20 I4Q C2 C1 SING N N 21 I4Q C3 O2 DOUB N N 22 I4Q C11 H1 SING N N 23 I4Q C1 H2 SING N N 24 I4Q C1 H3 SING N N 25 I4Q C1 H4 SING N N 26 I4Q C2 H5 SING N N 27 I4Q C2 H6 SING N N 28 I4Q C4 H7 SING N N 29 I4Q C5 H8 SING N N 30 I4Q C5 H9 SING N N 31 I4Q C6 H10 SING N N 32 I4Q C6 H11 SING N N 33 I4Q C7 H12 SING N N 34 I4Q C7 H13 SING N N 35 I4Q N1 H14 SING N N 36 I4Q N2 H15 SING N N 37 I4Q N2 H16 SING N N 38 I4Q N3 H17 SING N N 39 I4Q N4 H19 SING N N 40 I4Q C12 H20 SING N N 41 I4Q C13 H21 SING N N 42 I4Q C14 H22 SING N N 43 I4Q C15 H23 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I4Q InChI InChI 1.03 "InChI=1S/C15H22N4O3/c1-2-22-14(21)12(9-6-10-18-15(16)17)19-13(20)11-7-4-3-5-8-11/h3-5,7-8,12H,2,6,9-10H2,1H3,(H,19,20)(H4,16,17,18)/t12-/m0/s1" I4Q InChIKey InChI 1.03 YQDHCCVUYCIGSW-LBPRGKRZSA-N I4Q SMILES_CANONICAL CACTVS 3.385 "CCOC(=O)[C@H](CCCNC(N)=N)NC(=O)c1ccccc1" I4Q SMILES CACTVS 3.385 "CCOC(=O)[CH](CCCNC(N)=N)NC(=O)c1ccccc1" I4Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\NCCC[C@@H](C(=O)OCC)NC(=O)c1ccccc1" I4Q SMILES "OpenEye OEToolkits" 2.0.7 "CCOC(=O)C(CCCNC(=N)N)NC(=O)c1ccccc1" # _pdbx_chem_comp_identifier.comp_id I4Q _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "ethyl (2~{S})-2-benzamido-5-carbamimidamido-pentanoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I4Q "Create component" 2022-06-03 PDBJ I4Q "Initial release" 2024-08-14 RCSB #