data_I57 # _chem_comp.id I57 _chem_comp.name ;2,6-anhydro-3,4,5-trideoxy-5-[(2-methylpropanoyl)amino]-4-(4-phenyl-1H-1,2,3-triazol-1-yl)-D-glycero-D-galacto-non-2-en onic acid ; _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C21 H26 N4 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;(2~{R},3~{R},4~{S})-3-(2-methylpropanoylamino)-4-(4-phenyl-1,2,3-triazol-1-yl)-2-[(1~{R},2~{R})-1,2,3-tris(oxidanyl)pro pyl]-3,4-dihydro-2~{H}-pyran-6-carboxylic acid ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-07-21 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 446.454 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I57 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5KV9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id I57 _pdbx_chem_comp_synonyms.name ;(2~{R},3~{R},4~{S})-3-(2-methylpropanoylamino)-4-(4-phenyl-1,2,3-triazol-1-yl)-2-[(1~{R},2~{R})-1,2,3-tris(oxidanyl)pro pyl]-3,4-dihydro-2~{H}-pyran-6-carboxylic acid ; _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I57 O1A O1A O 0 1 N N N -11.825 -19.145 -8.331 -0.690 -4.518 -1.073 O1A I57 1 I57 O1B O1B O 0 1 N N N -11.932 -17.795 -6.749 -2.576 -4.329 0.084 O1B I57 2 I57 C1 C1 C 0 1 N N N -12.279 -18.802 -7.281 -1.519 -3.793 -0.559 C1 I57 3 I57 C2 C2 C 0 1 N N N -13.274 -19.667 -6.665 -1.369 -2.330 -0.637 C2 I57 4 I57 C3 C3 C 0 1 N N N -13.976 -19.294 -5.576 -0.318 -1.836 -1.276 C3 I57 5 I57 C4 C4 C 0 1 N N S -15.152 -20.131 -5.098 -0.085 -0.356 -1.415 C4 I57 6 I57 N4 N4 N 0 1 Y N N -15.521 -19.807 -3.695 1.331 -0.061 -1.185 N4 I57 7 I57 C5 C5 C 0 1 N N R -14.928 -21.594 -5.419 -0.937 0.394 -0.385 C5 I57 8 I57 N5 N5 N 0 1 N N N -16.125 -22.327 -5.160 -0.961 1.822 -0.710 N5 I57 9 I57 C6 C6 C 0 1 N N R -14.594 -21.732 -6.908 -2.362 -0.174 -0.436 C6 I57 10 I57 O6 O6 O 0 1 N N N -13.512 -20.940 -7.277 -2.314 -1.551 -0.058 O6 I57 11 I57 C7 C7 C 0 1 N N R -14.245 -23.157 -7.282 -3.259 0.599 0.534 C7 I57 12 I57 O7 O7 O 0 1 N N N -13.164 -23.582 -6.519 -2.683 0.570 1.841 O7 I57 13 I57 C8 C8 C 0 1 N N R -13.996 -23.247 -8.779 -4.645 -0.049 0.572 C8 I57 14 I57 O8 O8 O 0 1 N N N -15.196 -22.860 -9.340 -5.220 -0.020 -0.735 O8 I57 15 I57 C9 C9 C 0 1 N N N -13.534 -24.641 -9.195 -5.542 0.724 1.542 C9 I57 16 I57 O9 O9 O 0 1 N N N -14.500 -25.607 -9.042 -6.797 0.053 1.666 O9 I57 17 I57 C41 C41 C 0 1 Y N N -14.880 -19.620 -2.577 2.141 -0.704 -0.313 C41 I57 18 I57 C42 C42 C 0 1 Y N N -15.793 -19.272 -1.597 3.364 -0.109 -0.426 C42 I57 19 I57 N42 N42 N 0 1 Y N N -16.974 -19.284 -2.186 3.229 0.854 -1.354 N42 I57 20 I57 N41 N41 N 0 1 Y N N -16.842 -19.617 -3.492 2.016 0.849 -1.783 N41 I57 21 I57 C43 C43 C 0 1 Y N N -15.591 -18.982 -0.263 4.596 -0.456 0.326 C43 I57 22 I57 C44 C44 C 0 1 Y N N -16.672 -18.651 0.551 4.578 -1.492 1.259 C44 I57 23 I57 C45 C45 C 0 1 Y N N -16.514 -18.348 1.887 5.727 -1.810 1.954 C45 I57 24 I57 C46 C46 C 0 1 Y N N -15.228 -18.374 2.438 6.894 -1.104 1.728 C46 I57 25 I57 C47 C47 C 0 1 Y N N -14.170 -18.695 1.605 6.918 -0.075 0.804 C47 I57 26 I57 C48 C48 C 0 1 Y N N -14.340 -18.995 0.271 5.776 0.248 0.098 C48 I57 27 I57 C54 C54 C 0 1 N N N -17.439 -25.133 -4.133 -1.263 4.730 -0.037 C54 I57 28 I57 C11 C11 C 0 1 N N N -17.585 -23.657 -3.967 0.004 4.097 -0.616 C11 I57 29 I57 C53 C53 C 0 1 N N N -18.177 -23.324 -2.621 1.235 4.779 -0.014 C53 I57 30 I57 C10 C10 C 0 1 N N N -16.283 -22.960 -4.112 0.030 2.628 -0.281 C10 I57 31 I57 O10 O10 O 0 1 N N N -15.511 -23.012 -3.214 0.943 2.171 0.373 O10 I57 32 I57 HOB1 HOB1 H 0 0 N N N -11.279 -17.362 -7.286 -2.632 -5.294 0.109 HOB1 I57 33 I57 H3 H3 H 0 1 N N N -13.702 -18.397 -5.041 0.395 -2.519 -1.712 H3 I57 34 I57 H4 H4 H 0 1 N N N -16.007 -19.819 -5.715 -0.364 -0.037 -2.419 H4 I57 35 I57 H5 H5 H 0 1 N N N -14.092 -21.981 -4.818 -0.519 0.251 0.611 H5 I57 36 I57 HN5 HN5 H 0 1 N N N -16.854 -22.328 -5.845 -1.691 2.188 -1.234 HN5 I57 37 I57 H6 H6 H 0 1 N N N -15.484 -21.436 -7.482 -2.756 -0.087 -1.448 H6 I57 38 I57 H7 H7 H 0 1 N N N -15.119 -23.784 -7.053 -3.350 1.632 0.200 H7 I57 39 I57 HO7 HO7 H 0 1 N N N -13.377 -23.503 -5.596 -2.572 -0.320 2.203 HO7 I57 40 I57 H8 H8 H 0 1 N N N -13.204 -22.530 -9.041 -4.554 -1.082 0.906 H8 I57 41 I57 HO8 HO8 H 0 1 N N N -15.420 -21.987 -9.039 -5.331 0.871 -1.097 HO8 I57 42 I57 H91 H91 H 0 1 N N N -12.665 -24.918 -8.580 -5.060 0.778 2.518 H91 I57 43 I57 H92 H92 H 0 1 N N N -13.239 -24.608 -10.254 -5.705 1.732 1.161 H92 I57 44 I57 HO9 HO9 H 0 1 N N N -14.154 -26.448 -9.316 -7.418 0.488 2.267 HO9 I57 45 I57 H14 H14 H 0 1 N N N -13.814 -19.720 -2.438 1.873 -1.521 0.340 H14 I57 46 I57 H15 H15 H 0 1 N N N -17.663 -18.631 0.123 3.667 -2.043 1.437 H15 I57 47 I57 H16 H16 H 0 1 N N N -17.368 -18.095 2.498 5.714 -2.613 2.677 H16 I57 48 I57 H17 H17 H 0 1 N N N -15.066 -18.150 3.482 7.790 -1.356 2.275 H17 I57 49 I57 H18 H18 H 0 1 N N N -13.172 -18.711 2.017 7.831 0.474 0.631 H18 I57 50 I57 H19 H19 H 0 1 N N N -13.487 -19.238 -0.345 5.797 1.048 -0.627 H19 I57 51 I57 H20 H20 H 0 1 N N N -18.422 -25.614 -4.019 -1.281 5.793 -0.279 H20 I57 52 I57 H21 H21 H 0 1 N N N -17.038 -25.351 -5.134 -2.139 4.245 -0.466 H21 I57 53 I57 H22 H22 H 0 1 N N N -16.750 -25.521 -3.369 -1.270 4.603 1.046 H22 I57 54 I57 H111 H111 H 0 0 N N N -18.269 -23.286 -4.745 0.012 4.223 -1.698 H111 I57 55 I57 H24 H24 H 0 1 N N N -18.275 -22.233 -2.523 1.228 4.652 1.068 H24 I57 56 I57 H25 H25 H 0 1 N N N -19.169 -23.790 -2.532 2.138 4.328 -0.427 H25 I57 57 I57 H26 H26 H 0 1 N N N -17.519 -23.706 -1.827 1.217 5.841 -0.256 H26 I57 58 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I57 O8 C8 SING N N 1 I57 C9 O9 SING N N 2 I57 C9 C8 SING N N 3 I57 C8 C7 SING N N 4 I57 O1A C1 DOUB N N 5 I57 C7 C6 SING N N 6 I57 C7 O7 SING N N 7 I57 C1 O1B SING N N 8 I57 C1 C2 SING N N 9 I57 O6 C6 SING N N 10 I57 O6 C2 SING N N 11 I57 C6 C5 SING N N 12 I57 C2 C3 DOUB N N 13 I57 C3 C4 SING N N 14 I57 C5 N5 SING N N 15 I57 C5 C4 SING N N 16 I57 N5 C10 SING N N 17 I57 C4 N4 SING N N 18 I57 C54 C11 SING N N 19 I57 C10 C11 SING N N 20 I57 C10 O10 DOUB N N 21 I57 C11 C53 SING N N 22 I57 N4 N41 SING Y N 23 I57 N4 C41 SING Y N 24 I57 N41 N42 DOUB Y N 25 I57 C41 C42 DOUB Y N 26 I57 N42 C42 SING Y N 27 I57 C42 C43 SING N N 28 I57 C43 C48 DOUB Y N 29 I57 C43 C44 SING Y N 30 I57 C48 C47 SING Y N 31 I57 C44 C45 DOUB Y N 32 I57 C47 C46 DOUB Y N 33 I57 C45 C46 SING Y N 34 I57 O1B HOB1 SING N N 35 I57 C3 H3 SING N N 36 I57 C4 H4 SING N N 37 I57 C5 H5 SING N N 38 I57 N5 HN5 SING N N 39 I57 C6 H6 SING N N 40 I57 C7 H7 SING N N 41 I57 O7 HO7 SING N N 42 I57 C8 H8 SING N N 43 I57 O8 HO8 SING N N 44 I57 C9 H91 SING N N 45 I57 C9 H92 SING N N 46 I57 O9 HO9 SING N N 47 I57 C41 H14 SING N N 48 I57 C44 H15 SING N N 49 I57 C45 H16 SING N N 50 I57 C46 H17 SING N N 51 I57 C47 H18 SING N N 52 I57 C48 H19 SING N N 53 I57 C54 H20 SING N N 54 I57 C54 H21 SING N N 55 I57 C54 H22 SING N N 56 I57 C11 H111 SING N N 57 I57 C53 H24 SING N N 58 I57 C53 H25 SING N N 59 I57 C53 H26 SING N N 60 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I57 InChI InChI 1.03 "InChI=1S/C21H26N4O7/c1-11(2)20(29)22-17-14(25-9-13(23-24-25)12-6-4-3-5-7-12)8-16(21(30)31)32-19(17)18(28)15(27)10-26/h3-9,11,14-15,17-19,26-28H,10H2,1-2H3,(H,22,29)(H,30,31)/t14-,15+,17+,18+,19+/m0/s1" I57 InChIKey InChI 1.03 OGNVQLDIPUXYDH-ZPKKHLQPSA-N I57 SMILES_CANONICAL CACTVS 3.385 "CC(C)C(=O)N[C@H]1[C@@H](OC(=C[C@@H]1n2cc(nn2)c3ccccc3)C(O)=O)[C@H](O)[C@H](O)CO" I57 SMILES CACTVS 3.385 "CC(C)C(=O)N[CH]1[CH](OC(=C[CH]1n2cc(nn2)c3ccccc3)C(O)=O)[CH](O)[CH](O)CO" I57 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "CC(C)C(=O)N[C@@H]1[C@H](C=C(O[C@H]1[C@@H]([C@@H](CO)O)O)C(=O)O)n2cc(nn2)c3ccccc3" I57 SMILES "OpenEye OEToolkits" 2.0.5 "CC(C)C(=O)NC1C(C=C(OC1C(C(CO)O)O)C(=O)O)n2cc(nn2)c3ccccc3" # _pdbx_chem_comp_identifier.comp_id I57 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.5 _pdbx_chem_comp_identifier.identifier ;(2~{R},3~{R},4~{S})-3-(2-methylpropanoylamino)-4-(4-phenyl-1,2,3-triazol-1-yl)-2-[(1~{R},2~{R})-1,2,3-tris(oxidanyl)pro pyl]-3,4-dihydro-2~{H}-pyran-6-carboxylic acid ; # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support I57 "CARBOHYDRATE ISOMER" D PDB ? I57 "CARBOHYDRATE RING" dihydropyran PDB ? I57 "CARBOHYDRATE PRIMARY CARBONYL GROUP" ketose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I57 "Create component" 2016-07-21 RCSB I57 "Initial release" 2017-07-12 RCSB I57 "Other modification" 2020-04-12 RCSB I57 "Other modification" 2020-07-03 RCSB I57 "Modify name" 2020-07-17 RCSB I57 "Modify synonyms" 2020-07-17 RCSB I57 "Modify component atom id" 2020-07-17 RCSB ##