data_I5D # _chem_comp.id I5D _chem_comp.name "2-[6-azanyl-3,5-dicyano-4-[4-(cyclopropylmethoxy)phenyl]pyridin-2-yl]sulfanylethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H17 N5 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-06-09 _chem_comp.pdbx_modified_date 2023-01-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 379.436 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I5D _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I5D N1 N1 N 0 1 N N N ? ? ? 7.852 -0.367 0.371 N1 I5D 1 I5D N3 N2 N 0 1 N N N ? ? ? -1.079 3.766 -0.214 N3 I5D 2 I5D C5 C1 C 0 1 N N N ? ? ? 5.396 -0.126 0.201 C5 I5D 3 I5D C6 C2 C 0 1 N N N ? ? ? 6.647 -0.963 0.277 C6 I5D 4 I5D C8 C3 C 0 1 Y N N ? ? ? 2.059 2.232 -0.001 C8 I5D 5 I5D C10 C4 C 0 1 Y N N ? ? ? -2.895 -0.848 -1.510 C10 I5D 6 I5D C13 C5 C 0 1 N N N ? ? ? -7.364 -1.027 0.211 C13 I5D 7 I5D C15 C6 C 0 1 N N N ? ? ? -8.409 -0.860 1.316 C15 I5D 8 I5D C17 C7 C 0 1 Y N N ? ? ? -1.998 0.460 0.771 C17 I5D 9 I5D "C1'" C8 C 0 1 Y N N ? ? ? 2.669 -0.004 0.009 "C1'" I5D 10 I5D C11 C9 C 0 1 Y N N ? ? ? -3.778 -0.549 -0.479 C11 I5D 11 I5D C12 C10 C 0 1 N N N ? ? ? -5.938 -0.559 0.511 C12 I5D 12 I5D C14 C11 C 0 1 N N N ? ? ? -8.447 0.046 0.083 C14 I5D 13 I5D C16 C12 C 0 1 Y N N ? ? ? -3.325 0.105 0.660 C16 I5D 14 I5D C18 C13 C 0 1 Y N N ? ? ? 0.693 1.910 -0.107 C18 I5D 15 I5D C19 C14 C 0 1 N N N ? ? ? -0.295 2.945 -0.167 C19 I5D 16 I5D "C2'" C15 C 0 1 Y N N ? ? ? 1.328 -0.422 -0.091 "C2'" I5D 17 I5D "C3'" C16 C 0 1 Y N N ? ? ? 0.313 0.553 -0.154 "C3'" I5D 18 I5D "C4'" C17 C 0 1 Y N N ? ? ? -1.109 0.165 -0.265 "C4'" I5D 19 I5D "C5'" C18 C 0 1 Y N N ? ? ? -1.567 -0.497 -1.406 "C5'" I5D 20 I5D CAA C19 C 0 1 N N N ? ? ? 1.002 -1.815 -0.135 CAA I5D 21 I5D N2 N3 N 0 1 N N N ? ? ? 0.743 -2.921 -0.170 N2 I5D 22 I5D N9 N4 N 0 1 Y N N ? ? ? 2.979 1.283 0.050 N9 I5D 23 I5D NAA N5 N 0 1 N N N ? ? ? 2.444 3.557 0.046 NAA I5D 24 I5D O6 O1 O 0 1 N N N ? ? ? 6.569 -2.173 0.254 O6 I5D 25 I5D OP3 O2 O 0 1 N N N ? ? ? -5.086 -0.897 -0.586 OP3 I5D 26 I5D S1 S1 S 0 1 N N N ? ? ? 3.951 -1.210 0.083 S1 I5D 27 I5D H1 H1 H 0 1 N N N ? ? ? 7.914 0.601 0.390 H1 I5D 28 I5D H2 H2 H 0 1 N N N ? ? ? 8.657 -0.905 0.424 H2 I5D 29 I5D H3 H3 H 0 1 N N N ? ? ? 5.315 0.490 1.097 H3 I5D 30 I5D H4 H4 H 0 1 N N N ? ? ? 5.441 0.516 -0.679 H4 I5D 31 I5D H5 H5 H 0 1 N N N ? ? ? -3.250 -1.361 -2.392 H5 I5D 32 I5D H6 H6 H 0 1 N N N ? ? ? -7.446 -1.904 -0.431 H6 I5D 33 I5D H7 H7 H 0 1 N N N ? ? ? -9.178 -1.628 1.401 H7 I5D 34 I5D H8 H8 H 0 1 N N N ? ? ? -8.081 -0.418 2.257 H8 I5D 35 I5D H9 H9 H 0 1 N N N ? ? ? -1.648 0.972 1.655 H9 I5D 36 I5D H10 H10 H 0 1 N N N ? ? ? -5.933 0.521 0.655 H10 I5D 37 I5D H11 H11 H 0 1 N N N ? ? ? -5.578 -1.048 1.415 H11 I5D 38 I5D H12 H12 H 0 1 N N N ? ? ? -8.145 1.085 0.212 H12 I5D 39 I5D H13 H13 H 0 1 N N N ? ? ? -9.242 -0.126 -0.643 H13 I5D 40 I5D H14 H14 H 0 1 N N N ? ? ? -4.014 0.336 1.459 H14 I5D 41 I5D H15 H15 H 0 1 N N N ? ? ? -0.881 -0.734 -2.205 H15 I5D 42 I5D H16 H16 H 0 1 N N N ? ? ? 1.775 4.258 0.005 H16 I5D 43 I5D H17 H17 H 0 1 N N N ? ? ? 3.384 3.786 0.119 H17 I5D 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I5D C14 C15 SING N N 1 I5D C14 C13 SING N N 2 I5D C15 C13 SING N N 3 I5D C13 C12 SING N N 4 I5D OP3 C12 SING N N 5 I5D OP3 C11 SING N N 6 I5D C16 C11 DOUB Y N 7 I5D C16 C17 SING Y N 8 I5D C11 C10 SING Y N 9 I5D N2 CAA TRIP N N 10 I5D C17 "C4'" DOUB Y N 11 I5D C10 "C5'" DOUB Y N 12 I5D CAA "C2'" SING N N 13 I5D "C4'" "C5'" SING Y N 14 I5D "C4'" "C3'" SING N N 15 I5D "C2'" "C3'" DOUB Y N 16 I5D "C2'" "C1'" SING Y N 17 I5D "C3'" C18 SING Y N 18 I5D S1 "C1'" SING N N 19 I5D S1 C5 SING N N 20 I5D "C1'" N9 DOUB Y N 21 I5D C18 C19 SING N N 22 I5D C18 C8 DOUB Y N 23 I5D C19 N3 TRIP N N 24 I5D N1 C6 SING N N 25 I5D N9 C8 SING Y N 26 I5D C5 C6 SING N N 27 I5D C6 O6 DOUB N N 28 I5D C8 NAA SING N N 29 I5D N1 H1 SING N N 30 I5D N1 H2 SING N N 31 I5D C5 H3 SING N N 32 I5D C5 H4 SING N N 33 I5D C10 H5 SING N N 34 I5D C13 H6 SING N N 35 I5D C15 H7 SING N N 36 I5D C15 H8 SING N N 37 I5D C17 H9 SING N N 38 I5D C12 H10 SING N N 39 I5D C12 H11 SING N N 40 I5D C14 H12 SING N N 41 I5D C14 H13 SING N N 42 I5D C16 H14 SING N N 43 I5D "C5'" H15 SING N N 44 I5D NAA H16 SING N N 45 I5D NAA H17 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I5D InChI InChI 1.03 "InChI=1S/C19H17N5O2S/c20-7-14-17(12-3-5-13(6-4-12)26-9-11-1-2-11)15(8-21)19(24-18(14)23)27-10-16(22)25/h3-6,11H,1-2,9-10H2,(H2,22,25)(H2,23,24)" I5D InChIKey InChI 1.03 ZTYHZMAZUWOXNC-UHFFFAOYSA-N I5D SMILES_CANONICAL CACTVS 3.385 "NC(=O)CSc1nc(N)c(C#N)c(c2ccc(OCC3CC3)cc2)c1C#N" I5D SMILES CACTVS 3.385 "NC(=O)CSc1nc(N)c(C#N)c(c2ccc(OCC3CC3)cc2)c1C#N" I5D SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1c2c(c(nc(c2C#N)SCC(=O)N)N)C#N)OCC3CC3" I5D SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1c2c(c(nc(c2C#N)SCC(=O)N)N)C#N)OCC3CC3" # _pdbx_chem_comp_identifier.comp_id I5D _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[6-azanyl-3,5-dicyano-4-[4-(cyclopropylmethoxy)phenyl]pyridin-2-yl]sulfanylethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I5D "Create component" 2022-06-09 PDBJ I5D "Initial release" 2023-01-18 RCSB #