data_I64 # _chem_comp.id I64 _chem_comp.name "benzyl [(2S)-1-({(2S)-1-[2-(3-amino-3-oxopropyl)-2-propanoylhydrazinyl]-4-methyl-1-oxopentan-2-yl}amino)-3-methyl-1-oxobutan-2-yl]carbamate (non-preferred name)" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H39 N5 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-13 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 505.607 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I64 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7SHB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I64 N N1 N 0 1 N N N N N N -9.038 -17.746 -18.083 2.952 -0.501 -0.045 N I64 1 I64 C C1 C 0 1 Y N N N N N -6.267 -22.798 -20.703 9.946 0.949 0.589 C I64 2 I64 O O1 O 0 1 N N N N N N -7.178 -19.051 -17.448 5.217 -0.094 -0.429 O I64 3 I64 C1 C2 C 0 1 Y N N N N N -5.912 -21.524 -21.134 9.585 -0.370 0.392 C1 I64 4 I64 C10 C3 C 0 1 N N S N N N -9.675 -13.173 -18.050 -1.719 0.310 0.940 C10 I64 5 I64 C11 C4 C 0 1 N N N N N N -11.116 -12.903 -17.753 -3.074 -0.094 0.419 C11 I64 6 I64 C12 C5 C 0 1 N N N N N N -13.269 -12.808 -15.393 -6.342 0.817 0.089 C12 I64 7 I64 C13 C6 C 0 1 N N N N N N -13.937 -13.964 -16.150 -6.175 0.862 -1.431 C13 I64 8 I64 C14 C7 C 0 1 N N N N N N -14.673 -14.872 -15.178 -7.102 1.902 -2.007 C14 I64 9 I64 C15 C8 C 0 1 N N N N N N -13.257 -10.859 -16.938 -5.824 -1.484 0.699 C15 I64 10 I64 C16 C9 C 0 1 N N N N N N -12.472 -9.870 -17.775 -4.897 -2.524 1.275 C16 I64 11 I64 C17 C10 C 0 1 N N N N N N -11.492 -9.089 -16.924 -5.569 -3.897 1.212 C17 I64 12 I64 C18 C11 C 0 1 N N N N N N -11.086 -17.440 -19.292 1.481 -2.342 -0.699 C18 I64 13 I64 C2 C12 C 0 1 Y N N N N N -5.804 -20.488 -20.214 8.401 -0.674 -0.254 C2 I64 14 I64 C24 C13 C 0 1 N N N N N N -9.092 -12.003 -18.842 -1.674 1.829 1.118 C24 I64 15 I64 C25 C14 C 0 1 N N N N N N -7.567 -12.052 -18.932 -0.345 2.228 1.763 C25 I64 16 I64 C26 C15 C 0 1 N N N N N N -7.078 -13.120 -19.917 -0.246 3.753 1.827 C26 I64 17 I64 C3 C16 C 0 1 Y N N N N N -6.055 -20.725 -18.853 7.578 0.343 -0.702 C3 I64 18 I64 C30 C17 C 0 1 N N N N N N -6.962 -12.222 -17.537 -0.273 1.652 3.179 C30 I64 19 I64 C35 C18 C 0 1 N N N N N N -10.869 -18.595 -20.274 2.451 -2.840 -1.772 C35 I64 20 I64 C4 C19 C 0 1 Y N N N N N -6.402 -22.005 -18.426 7.939 1.663 -0.504 C4 I64 21 I64 C5 C20 C 0 1 Y N N N N N -6.507 -23.036 -19.352 9.123 1.966 0.141 C5 I64 22 I64 C6 C21 C 0 1 N N N N N N -5.918 -19.608 -17.827 6.287 0.013 -1.405 C6 I64 23 I64 C60 C22 C 0 1 N N N N N N -12.092 -16.409 -19.814 1.810 -3.014 0.636 C60 I64 24 I64 C7 C23 C 0 1 N N N N N N -7.824 -18.155 -18.379 3.989 -0.387 -0.898 C7 I64 25 I64 C8 C24 C 0 1 N N S N N N -9.728 -16.829 -18.957 1.617 -0.825 -0.553 C8 I64 26 I64 C9 C25 C 0 1 N N N N N N -9.870 -15.557 -18.195 0.575 -0.317 0.410 C9 I64 27 I64 N1 N2 N 0 1 N N N N N N -9.602 -14.409 -18.804 -0.686 -0.101 -0.014 N1 I64 28 I64 N2 N3 N 0 1 N N N N N N -11.392 -12.165 -16.686 -4.181 0.183 1.134 N2 I64 29 I64 N3 N4 N 0 1 N N N N N N -12.644 -11.905 -16.361 -5.441 -0.193 0.650 N3 I64 30 I64 N4 N5 N 0 1 N N N N N N -15.605 -15.710 -15.647 -7.127 2.118 -3.337 N4 I64 31 I64 O1 O2 O 0 1 N N N N N N -7.237 -17.823 -19.396 3.816 -0.549 -2.089 O1 I64 32 I64 O2 O3 O 0 1 N N N N N N -10.218 -15.619 -17.048 0.871 -0.104 1.566 O2 I64 33 I64 O3 O4 O 0 1 N N N N N N -11.966 -13.359 -18.490 -3.167 -0.669 -0.645 O3 I64 34 I64 O4 O5 O 0 1 N N N N N N -14.428 -14.840 -13.986 -7.824 2.543 -1.274 O4 I64 35 I64 O5 O6 O 0 1 N N N N N N -14.460 -10.671 -16.827 -6.914 -1.810 0.279 O5 I64 36 I64 H1 H1 H 0 1 N N N N N N -9.484 -18.072 -17.249 3.090 -0.371 0.907 H1 I64 37 I64 H2 H2 H 0 1 N N N N N N -6.357 -23.603 -21.417 10.869 1.186 1.097 H2 I64 38 I64 H3 H3 H 0 1 N N N N N N -5.721 -21.340 -22.181 10.227 -1.164 0.742 H3 I64 39 I64 H4 H4 H 0 1 N N N N N N -9.121 -13.275 -17.105 -1.540 -0.173 1.900 H4 I64 40 I64 H5 H5 H 0 1 N N N N N N -12.503 -13.207 -14.712 -6.100 1.793 0.511 H5 I64 41 I64 H6 H6 H 0 1 N N N N N N -14.026 -12.260 -14.813 -7.373 0.561 0.334 H6 I64 42 I64 H7 H7 H 0 1 N N N N N N -14.653 -13.556 -16.879 -5.144 1.119 -1.676 H7 I64 43 I64 H8 H8 H 0 1 N N N N N N -13.167 -14.545 -16.678 -6.417 -0.113 -1.852 H8 I64 44 I64 H9 H9 H 0 1 N N N N N N -11.917 -10.418 -18.551 -3.972 -2.545 0.699 H9 I64 45 I64 H10 H10 H 0 1 N N N N N N -13.172 -9.168 -18.252 -4.674 -2.276 2.313 H10 I64 46 I64 H11 H11 H 0 1 N N N N N N -10.938 -8.381 -17.558 -4.899 -4.649 1.629 H11 I64 47 I64 H12 H12 H 0 1 N N N N N N -12.041 -8.535 -16.148 -6.494 -3.875 1.788 H12 I64 48 I64 H13 H13 H 0 1 N Y N N N N -10.785 -9.784 -16.447 -5.793 -4.145 0.175 H13 I64 49 I64 H14 H14 H 0 1 N N N N N N -11.498 -17.865 -18.365 0.460 -2.589 -0.989 H14 I64 50 I64 H15 H15 H 0 1 N N N N N N -5.526 -19.499 -20.547 8.118 -1.704 -0.408 H15 I64 51 I64 H16 H16 H 0 1 N N N N N N -9.385 -11.064 -18.350 -1.764 2.312 0.145 H16 I64 52 I64 H17 H17 H 0 1 N N N N N N -9.505 -12.027 -19.861 -2.498 2.145 1.758 H17 I64 53 I64 H18 H18 H 0 1 N N N N N N -7.231 -11.077 -19.316 0.480 1.835 1.169 H18 I64 54 I64 H19 H19 H 0 1 N N N N N N -5.978 -13.116 -19.946 -1.071 4.146 2.422 H19 I64 55 I64 H20 H20 H 0 1 N N N N N N -7.433 -14.109 -19.591 0.700 4.037 2.287 H20 I64 56 I64 H21 H21 H 0 1 N N N N N N -7.472 -12.901 -20.920 -0.298 4.163 0.819 H21 I64 57 I64 H22 H22 H 0 1 N N N N N N -7.344 -11.433 -16.872 -1.098 2.045 3.773 H22 I64 58 I64 H23 H23 H 0 1 N N N N N N -7.240 -13.207 -17.134 -0.343 0.565 3.133 H23 I64 59 I64 H24 H24 H 0 1 N N N N N N -5.866 -12.148 -17.601 0.674 1.936 3.639 H24 I64 60 I64 H25 H25 H 0 1 N N N N N N -10.141 -19.304 -19.852 3.472 -2.593 -1.483 H25 I64 61 I64 H26 H26 H 0 1 N N N N N N -11.824 -19.112 -20.449 2.355 -3.921 -1.876 H26 I64 62 I64 H27 H27 H 0 1 N N N N N N -10.486 -18.199 -21.226 2.217 -2.362 -2.723 H27 I64 63 I64 H28 H28 H 0 1 N N N N N N -6.589 -22.195 -17.379 7.296 2.457 -0.854 H28 I64 64 I64 H29 H29 H 0 1 N N N N N N -6.776 -24.028 -19.022 9.404 2.997 0.299 H29 I64 65 I64 H30 H30 H 0 1 N N N N N N -5.428 -20.013 -16.929 6.393 -0.935 -1.933 H30 I64 66 I64 H31 H31 H 0 1 N N N N N N -5.295 -18.810 -18.257 6.050 0.802 -2.119 H31 I64 67 I64 H32 H32 H 0 1 N N N N N N -12.211 -15.604 -19.074 2.827 -2.757 0.931 H32 I64 68 I64 H33 H33 H 0 1 N N N N N N -11.725 -15.985 -20.760 1.112 -2.667 1.398 H33 I64 69 I64 H34 H34 H 0 1 N N N N N N -13.063 -16.897 -19.983 1.724 -4.095 0.530 H34 I64 70 I64 H35 H35 H 0 1 N N N N N N -9.157 -16.659 -19.882 1.474 -0.353 -1.526 H35 I64 71 I64 H36 H36 H 0 1 N N N N N N -9.352 -14.397 -19.772 -0.909 -0.217 -0.951 H36 I64 72 I64 H37 H37 H 0 1 N N N N N N -10.647 -11.804 -16.125 -4.107 0.643 1.985 H37 I64 73 I64 H38 H38 H 0 1 N N N N N N -16.100 -16.310 -15.018 -6.549 1.605 -3.923 H38 I64 74 I64 H39 H39 H 0 1 N N N N N N -15.806 -15.736 -16.626 -7.724 2.787 -3.708 H39 I64 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I64 C1 C DOUB Y N 1 I64 C1 C2 SING Y N 2 I64 C C5 SING Y N 3 I64 C35 C18 SING N N 4 I64 C2 C3 DOUB Y N 5 I64 C26 C25 SING N N 6 I64 C60 C18 SING N N 7 I64 O1 C7 DOUB N N 8 I64 C5 C4 DOUB Y N 9 I64 C18 C8 SING N N 10 I64 C8 C9 SING N N 11 I64 C8 N SING N N 12 I64 C25 C24 SING N N 13 I64 C25 C30 SING N N 14 I64 C3 C4 SING Y N 15 I64 C3 C6 SING N N 16 I64 C24 C10 SING N N 17 I64 N1 C9 SING N N 18 I64 N1 C10 SING N N 19 I64 O3 C11 DOUB N N 20 I64 C7 N SING N N 21 I64 C7 O SING N N 22 I64 C9 O2 DOUB N N 23 I64 C10 C11 SING N N 24 I64 C6 O SING N N 25 I64 C16 C15 SING N N 26 I64 C16 C17 SING N N 27 I64 C11 N2 SING N N 28 I64 C15 O5 DOUB N N 29 I64 C15 N3 SING N N 30 I64 N2 N3 SING N N 31 I64 N3 C12 SING N N 32 I64 C13 C12 SING N N 33 I64 C13 C14 SING N N 34 I64 N4 C14 SING N N 35 I64 C14 O4 DOUB N N 36 I64 N H1 SING N N 37 I64 C H2 SING N N 38 I64 C1 H3 SING N N 39 I64 C10 H4 SING N N 40 I64 C12 H5 SING N N 41 I64 C12 H6 SING N N 42 I64 C13 H7 SING N N 43 I64 C13 H8 SING N N 44 I64 C16 H9 SING N N 45 I64 C16 H10 SING N N 46 I64 C17 H11 SING N N 47 I64 C17 H12 SING N N 48 I64 C17 H13 SING N N 49 I64 C18 H14 SING N N 50 I64 C2 H15 SING N N 51 I64 C24 H16 SING N N 52 I64 C24 H17 SING N N 53 I64 C25 H18 SING N N 54 I64 C26 H19 SING N N 55 I64 C26 H20 SING N N 56 I64 C26 H21 SING N N 57 I64 C30 H22 SING N N 58 I64 C30 H23 SING N N 59 I64 C30 H24 SING N N 60 I64 C35 H25 SING N N 61 I64 C35 H26 SING N N 62 I64 C35 H27 SING N N 63 I64 C4 H28 SING N N 64 I64 C5 H29 SING N N 65 I64 C6 H30 SING N N 66 I64 C6 H31 SING N N 67 I64 C60 H32 SING N N 68 I64 C60 H33 SING N N 69 I64 C60 H34 SING N N 70 I64 C8 H35 SING N N 71 I64 N1 H36 SING N N 72 I64 N2 H37 SING N N 73 I64 N4 H38 SING N N 74 I64 N4 H39 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I64 SMILES ACDLabs 12.01 "CCC(=O)N(CCC(N)=O)NC(=O)C(CC(C)C)NC(=O)C(NC(=O)OCc1ccccc1)C(C)C" I64 InChI InChI 1.03 "InChI=1S/C25H39N5O6/c1-6-21(32)30(13-12-20(26)31)29-23(33)19(14-16(2)3)27-24(34)22(17(4)5)28-25(35)36-15-18-10-8-7-9-11-18/h7-11,16-17,19,22H,6,12-15H2,1-5H3,(H2,26,31)(H,27,34)(H,28,35)(H,29,33)/t19-,22-/m0/s1" I64 InChIKey InChI 1.03 KUUJMWBAIGJHJP-UGKGYDQZSA-N I64 SMILES_CANONICAL CACTVS 3.385 "CCC(=O)N(CCC(N)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](NC(=O)OCc1ccccc1)C(C)C" I64 SMILES CACTVS 3.385 "CCC(=O)N(CCC(N)=O)NC(=O)[CH](CC(C)C)NC(=O)[CH](NC(=O)OCc1ccccc1)C(C)C" I64 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N(CCC(=O)N)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](C(C)C)NC(=O)OCc1ccccc1" I64 SMILES "OpenEye OEToolkits" 2.0.7 "CCC(=O)N(CCC(=O)N)NC(=O)C(CC(C)C)NC(=O)C(C(C)C)NC(=O)OCc1ccccc1" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier I64 "SYSTEMATIC NAME" ACDLabs 12.01 "benzyl [(2S)-1-({(2S)-1-[2-(3-amino-3-oxopropyl)-2-propanoylhydrazinyl]-4-methyl-1-oxopentan-2-yl}amino)-3-methyl-1-oxobutan-2-yl]carbamate (non-preferred name)" I64 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(phenylmethyl) ~{N}-[(2~{S})-1-[[(2~{S})-1-[2-(3-azanyl-3-oxidanylidene-propyl)-2-propanoyl-hydrazinyl]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I64 "Create component" 2021-10-13 RCSB I64 "Initial release" 2024-07-10 RCSB I64 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id I64 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C17 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #