data_I69 # _chem_comp.id I69 _chem_comp.name "(6S)-5-{(2S)-2-[(tert-butylcarbamoyl)amino]-3,3-dimethylbutanoyl}-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-5-azaspiro[2.4]heptane-6-carboxamide (non-preferred name)" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H43 N5 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-09-16 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 493.639 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I69 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7S73 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I69 C1 C1 C 0 1 N N N N N N -6.189 -12.570 -18.723 0.264 4.647 -2.125 C1 I69 1 I69 C11 C2 C 0 1 N N S N N N -9.590 -16.901 -18.399 -2.244 0.466 0.517 C11 I69 2 I69 C12 C3 C 0 1 N N N N N N -9.861 -15.710 -17.498 -0.786 0.258 0.195 C12 I69 3 I69 C13 C4 C 0 1 N N N N N N -7.997 -14.465 -18.633 -0.536 2.651 -0.529 C13 I69 4 I69 C14 C5 C 0 1 N N S N N N -9.488 -13.340 -17.066 1.334 1.173 -0.782 C14 I69 5 I69 C15 C6 C 0 1 N N N N N N -10.933 -12.965 -17.274 2.228 0.787 0.369 C15 I69 6 I69 C16 C7 C 0 1 N N N N N N -7.410 -13.187 -18.037 0.382 3.220 -1.623 C16 I69 7 I69 C17 C8 C 0 1 N N S N N N -13.040 -12.229 -16.378 4.326 -0.086 1.249 C17 I69 8 I69 C19 C9 C 0 1 N N N N N N -14.009 -13.083 -15.549 5.326 -1.146 0.785 C19 I69 9 I69 C2 C10 C 0 1 N N N N N N -6.061 -13.168 -17.321 -0.099 3.471 -3.040 C2 I69 10 I69 C20 C11 C 0 1 N N S N N N -14.139 -14.524 -16.045 4.576 -2.426 0.409 C20 I69 11 I69 C21 C12 C 0 1 N N N N N N -14.894 -14.704 -17.364 5.569 -3.525 -0.034 C21 I69 12 I69 C22 C13 C 0 1 N N N N N N -15.642 -16.022 -17.188 5.588 -3.332 -1.567 C22 I69 13 I69 C24 C14 C 0 1 N N N N N N -14.954 -15.379 -15.089 3.711 -2.193 -0.810 C24 I69 14 I69 C26 C15 C 0 1 N N N N N N -10.380 -18.397 -20.229 -1.970 -0.405 2.843 C26 I69 15 I69 C27 C16 C 0 1 N N N N N N -6.411 -21.397 -17.620 -6.638 -0.869 -1.886 C27 I69 16 I69 C28 C17 C 0 1 N N N N N N -6.019 -20.511 -15.338 -7.170 -1.145 0.540 C28 I69 17 I69 C29 C18 C 0 1 N N N N N N -5.096 -19.268 -17.262 -6.957 -3.155 -0.929 C29 I69 18 I69 C30 C19 C 0 1 N N N N N N -10.792 -17.279 -19.274 -2.395 0.801 2.002 C30 I69 19 I69 C31 C20 C 0 1 N N N N N N -11.224 -16.080 -20.111 -1.510 2.000 2.347 C31 I69 20 I69 C32 C21 C 0 1 N N N N N N -11.983 -17.795 -18.473 -3.856 1.142 2.302 C32 I69 21 I69 C34 C22 C 0 1 N N N N N N -8.555 -12.262 -17.658 1.740 2.564 -1.319 C34 I69 22 I69 C7 C23 C 0 1 N N N N N N -6.272 -20.124 -16.790 -6.424 -1.747 -0.652 C7 I69 23 I69 C8 C24 C 0 1 N N N N N N -13.121 -10.746 -16.010 5.083 1.148 1.742 C8 I69 24 I69 C9 C25 C 0 1 N N N N N N -7.981 -18.575 -17.770 -4.306 -0.693 -0.067 C9 I69 25 I69 N10 N1 N 0 1 N N N N N N -9.178 -18.029 -17.589 -2.990 -0.758 0.214 N10 I69 26 I69 N13 N2 N 0 1 N N N N N N -9.158 -14.593 -17.747 -0.061 1.268 -0.325 N13 I69 27 I69 N16 N3 N 0 1 N N N N N N -11.643 -12.645 -16.199 3.457 0.289 0.130 N16 I69 28 I69 N23 N4 N 0 1 N N N N N N -15.771 -16.181 -15.750 4.298 -2.716 -1.900 N23 I69 29 I69 N8 N5 N 0 1 N N N N N N -7.548 -19.392 -16.820 -4.993 -1.819 -0.346 N8 I69 30 I69 O26 O1 O 0 1 N N N N N N -14.857 -15.296 -13.878 2.642 -1.620 -0.804 O26 I69 31 I69 O29 O2 O 0 1 N N N N N N -7.368 -18.333 -18.811 -4.875 0.382 -0.070 O29 I69 32 I69 O33 O3 O 0 1 N N N N N N -10.654 -15.792 -16.560 -0.266 -0.818 0.403 O33 I69 33 I69 O38 O4 O 0 1 N N N N N N -11.397 -12.987 -18.398 1.841 0.926 1.510 O38 I69 34 I69 O9 O5 O 0 1 N N N N N N -14.435 -10.170 -16.083 5.965 1.608 0.716 O9 I69 35 I69 H1 H1 H 0 1 N N N N N N -5.726 -13.077 -19.582 -0.554 5.252 -1.735 H1 I69 36 I69 H2 H2 H 0 1 N N N N N N -6.129 -11.481 -18.864 1.188 5.184 -2.337 H2 I69 37 I69 H3 H3 H 0 1 N N N N N N -8.762 -16.631 -19.071 -2.635 1.287 -0.082 H3 I69 38 I69 H4 H4 H 0 1 N N N N N N -8.289 -14.337 -19.686 -0.433 3.227 0.391 H4 I69 39 I69 H5 H5 H 0 1 N N N N N N -7.310 -15.319 -18.544 -1.573 2.651 -0.865 H5 I69 40 I69 H6 H6 H 0 1 N N N N N N -9.286 -13.433 -15.989 1.414 0.431 -1.577 H6 I69 41 I69 H7 H7 H 0 1 N N N N N N -13.312 -12.335 -17.439 3.719 -0.489 2.061 H7 I69 42 I69 H8 H8 H 0 1 N N N N N N -13.650 -13.105 -14.509 5.871 -0.776 -0.083 H8 I69 43 I69 H9 H9 H 0 1 N N N N N N -15.003 -12.613 -15.584 6.028 -1.360 1.591 H9 I69 44 I69 H10 H10 H 0 1 N N N N N N -5.505 -14.105 -17.172 -1.155 3.304 -3.251 H10 I69 45 I69 H11 H11 H 0 1 N N N N N N -5.908 -12.509 -16.454 0.587 3.236 -3.853 H11 I69 46 I69 H12 H12 H 0 1 N N N N N N -13.134 -14.958 -16.147 3.970 -2.772 1.247 H12 I69 47 I69 H13 H13 H 0 1 N N N N N N -14.193 -14.763 -18.210 6.557 -3.353 0.393 H13 I69 48 I69 H14 H14 H 0 1 N N N N N N -15.598 -13.874 -17.527 5.198 -4.515 0.230 H14 I69 49 I69 H15 H15 H 0 1 N N N N N N -16.633 -15.973 -17.664 6.407 -2.673 -1.854 H15 I69 50 I69 H16 H16 H 0 1 N N N N N N -15.068 -16.855 -17.621 5.685 -4.296 -2.067 H16 I69 51 I69 H17 H17 H 0 1 N N N N N N -10.063 -19.277 -19.650 -2.600 -1.260 2.597 H17 I69 52 I69 H18 H18 H 0 1 N N N N N N -11.234 -18.667 -20.867 -0.929 -0.648 2.630 H18 I69 53 I69 H19 H19 H 0 1 N N N N N N -9.546 -18.053 -20.858 -2.078 -0.166 3.901 H19 I69 54 I69 H20 H20 H 0 1 N N N N N N -7.265 -21.984 -17.251 -7.703 -0.816 -2.113 H20 I69 55 I69 H21 H21 H 0 1 N N N N N N -6.577 -21.131 -18.674 -6.258 0.134 -1.689 H21 I69 56 I69 H22 H22 H 0 1 N N N N N N -5.491 -21.994 -17.533 -6.106 -1.298 -2.735 H22 I69 57 I69 H23 H23 H 0 1 N N N N N N -5.917 -19.601 -14.728 -8.235 -1.091 0.312 H23 I69 58 I69 H24 H24 H 0 1 N N N N N N -6.864 -21.109 -14.966 -7.018 -1.770 1.419 H24 I69 59 I69 H25 H25 H 0 1 N N N N N N -5.094 -21.102 -15.272 -6.791 -0.142 0.737 H25 I69 60 I69 H26 H26 H 0 1 N N N N N N -5.029 -18.362 -16.641 -6.424 -3.584 -1.778 H26 I69 61 I69 H27 H27 H 0 1 N N N N N N -4.163 -19.844 -17.172 -6.804 -3.780 -0.049 H27 I69 62 I69 H28 H28 H 0 1 N N N N N N -5.250 -18.982 -18.313 -8.021 -3.102 -1.156 H28 I69 63 I69 H29 H29 H 0 1 N N N N N N -11.527 -15.258 -19.446 -0.463 1.728 2.218 H29 I69 64 I69 H30 H30 H 0 1 N N N N N N -10.384 -15.751 -20.741 -1.753 2.833 1.687 H30 I69 65 I69 H31 H31 H 0 1 N N N N N N -12.072 -16.366 -20.750 -1.684 2.294 3.382 H31 I69 66 I69 H32 H32 H 0 1 N N N N N N -12.316 -17.019 -17.768 -3.964 1.381 3.360 H32 I69 67 I69 H33 H33 H 0 1 N N N N N N -12.806 -18.044 -19.159 -4.159 2.001 1.703 H33 I69 68 I69 H34 H34 H 0 1 N N N N N N -11.687 -18.695 -17.914 -4.486 0.287 2.056 H34 I69 69 I69 H35 H35 H 0 1 N N N N N N -8.258 -11.509 -16.913 2.281 3.129 -0.559 H35 I69 70 I69 H36 H36 H 0 1 N N N N N N -8.995 -11.759 -18.532 2.335 2.469 -2.227 H36 I69 71 I69 H37 H37 H 0 1 N N N N N N -12.755 -10.630 -14.979 4.371 1.936 1.990 H37 I69 72 I69 H38 H38 H 0 1 N Y N N N N -12.466 -10.189 -16.696 5.661 0.890 2.630 H38 I69 73 I69 H39 H39 H 0 1 N N N N N N -9.795 -18.397 -16.893 -2.536 -1.616 0.216 H39 I69 74 I69 H40 H40 H 0 1 N N N N N N -11.235 -12.686 -15.287 3.766 0.177 -0.782 H40 I69 75 I69 H41 H41 H 0 1 N N N N N N -16.403 -16.821 -15.312 3.919 -2.688 -2.792 H41 I69 76 I69 H42 H42 H 0 1 N N N N N N -8.156 -19.526 -16.037 -4.539 -2.676 -0.344 H42 I69 77 I69 H43 H43 H 0 1 N N N N N N -14.393 -9.253 -15.840 6.479 2.390 0.960 H43 I69 78 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I69 C26 C30 SING N N 1 I69 C31 C30 SING N N 2 I69 C30 C32 SING N N 3 I69 C30 C11 SING N N 4 I69 O29 C9 DOUB N N 5 I69 C1 C16 SING N N 6 I69 C1 C2 SING N N 7 I69 C13 C16 SING N N 8 I69 C13 N13 SING N N 9 I69 C11 N10 SING N N 10 I69 C11 C12 SING N N 11 I69 O38 C15 DOUB N N 12 I69 C16 C34 SING N N 13 I69 C16 C2 SING N N 14 I69 C9 N10 SING N N 15 I69 C9 N8 SING N N 16 I69 N13 C12 SING N N 17 I69 N13 C14 SING N N 18 I69 C34 C14 SING N N 19 I69 C27 C7 SING N N 20 I69 C12 O33 DOUB N N 21 I69 C21 C22 SING N N 22 I69 C21 C20 SING N N 23 I69 C15 C14 SING N N 24 I69 C15 N16 SING N N 25 I69 C29 C7 SING N N 26 I69 C22 N23 SING N N 27 I69 N8 C7 SING N N 28 I69 C7 C28 SING N N 29 I69 C17 N16 SING N N 30 I69 C17 C8 SING N N 31 I69 C17 C19 SING N N 32 I69 O9 C8 SING N N 33 I69 C20 C19 SING N N 34 I69 C20 C24 SING N N 35 I69 N23 C24 SING N N 36 I69 C24 O26 DOUB N N 37 I69 C1 H1 SING N N 38 I69 C1 H2 SING N N 39 I69 C11 H3 SING N N 40 I69 C13 H4 SING N N 41 I69 C13 H5 SING N N 42 I69 C14 H6 SING N N 43 I69 C17 H7 SING N N 44 I69 C19 H8 SING N N 45 I69 C19 H9 SING N N 46 I69 C2 H10 SING N N 47 I69 C2 H11 SING N N 48 I69 C20 H12 SING N N 49 I69 C21 H13 SING N N 50 I69 C21 H14 SING N N 51 I69 C22 H15 SING N N 52 I69 C22 H16 SING N N 53 I69 C26 H17 SING N N 54 I69 C26 H18 SING N N 55 I69 C26 H19 SING N N 56 I69 C27 H20 SING N N 57 I69 C27 H21 SING N N 58 I69 C27 H22 SING N N 59 I69 C28 H23 SING N N 60 I69 C28 H24 SING N N 61 I69 C28 H25 SING N N 62 I69 C29 H26 SING N N 63 I69 C29 H27 SING N N 64 I69 C29 H28 SING N N 65 I69 C31 H29 SING N N 66 I69 C31 H30 SING N N 67 I69 C31 H31 SING N N 68 I69 C32 H32 SING N N 69 I69 C32 H33 SING N N 70 I69 C32 H34 SING N N 71 I69 C34 H35 SING N N 72 I69 C34 H36 SING N N 73 I69 C8 H37 SING N N 74 I69 C8 H38 SING N N 75 I69 N10 H39 SING N N 76 I69 N16 H40 SING N N 77 I69 N23 H41 SING N N 78 I69 N8 H42 SING N N 79 I69 O9 H43 SING N N 80 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I69 SMILES ACDLabs 12.01 "O=C(C(NC(=O)NC(C)(C)C)C(C)(C)C)N1CC2(CC2)CC1C(=O)NC(CC1CCNC1=O)CO" I69 InChI InChI 1.03 "InChI=1S/C25H43N5O5/c1-23(2,3)18(28-22(35)29-24(4,5)6)21(34)30-14-25(8-9-25)12-17(30)20(33)27-16(13-31)11-15-7-10-26-19(15)32/h15-18,31H,7-14H2,1-6H3,(H,26,32)(H,27,33)(H2,28,29,35)/t15-,16-,17-,18+/m0/s1" I69 InChIKey InChI 1.03 QPINBLRCPHAOCS-XLAORIBOSA-N I69 SMILES_CANONICAL CACTVS 3.385 "CC(C)(C)NC(=O)N[C@H](C(=O)N1CC2(CC2)C[C@H]1C(=O)N[C@H](CO)C[C@@H]3CCNC3=O)C(C)(C)C" I69 SMILES CACTVS 3.385 "CC(C)(C)NC(=O)N[CH](C(=O)N1CC2(CC2)C[CH]1C(=O)N[CH](CO)C[CH]3CCNC3=O)C(C)(C)C" I69 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)[C@@H](C(=O)N1CC2(CC2)C[C@H]1C(=O)N[C@@H](C[C@@H]3CCNC3=O)CO)NC(=O)NC(C)(C)C" I69 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(C)C(C(=O)N1CC2(CC2)CC1C(=O)NC(CC3CCNC3=O)CO)NC(=O)NC(C)(C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier I69 "SYSTEMATIC NAME" ACDLabs 12.01 "(6S)-5-{(2S)-2-[(tert-butylcarbamoyl)amino]-3,3-dimethylbutanoyl}-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-5-azaspiro[2.4]heptane-6-carboxamide (non-preferred name)" I69 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(6~{S})-5-[(2~{S})-2-(~{tert}-butylcarbamoylamino)-3,3-dimethyl-butanoyl]-~{N}-[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-5-azaspiro[2.4]heptane-6-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I69 "Create component" 2021-09-16 RCSB I69 "Initial release" 2022-07-27 RCSB I69 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id I69 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C8 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #