data_I6H # _chem_comp.id I6H _chem_comp.name Dexverapamil _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H38 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-02-15 _chem_comp.pdbx_modified_date 2022-10-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 454.602 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I6H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7QKR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I6H C30 C1 C 0 1 N N N 92.070 105.291 105.820 -5.336 3.658 -0.233 C30 I6H 1 I6H O19 O1 O 0 1 N N N 91.216 104.797 106.809 -6.194 2.796 0.517 O19 I6H 2 I6H C6 C2 C 0 1 Y N N 91.904 104.243 107.886 -5.868 1.476 0.549 C6 I6H 3 I6H C5 C3 C 0 1 Y N N 93.280 104.306 107.893 -4.746 1.022 -0.125 C5 I6H 4 I6H C9 C4 C 0 1 Y N N 91.236 103.637 108.932 -6.656 0.580 1.265 C9 I6H 5 I6H O23 O2 O 0 1 N N N 89.843 103.562 108.942 -7.755 1.022 1.933 O23 I6H 6 I6H C32 C5 C 0 1 N N N 89.344 102.951 110.094 -8.517 0.046 2.646 C32 I6H 7 I6H C13 C6 C 0 1 Y N N 91.950 103.098 109.986 -6.319 -0.763 1.296 C13 I6H 8 I6H C11 C7 C 0 1 Y N N 93.333 103.160 109.997 -5.202 -1.211 0.616 C11 I6H 9 I6H C2 C8 C 0 1 Y N N 93.992 103.771 108.948 -4.416 -0.320 -0.090 C2 I6H 10 I6H C1 C9 C 0 1 N N R 95.510 103.859 108.906 -3.195 -0.813 -0.824 C1 I6H 11 I6H C15 C10 C 0 1 N N N 96.144 102.745 109.708 -3.047 -2.321 -0.613 C15 I6H 12 I6H C29 C11 C 0 1 N N N 96.311 103.158 111.164 -2.900 -2.615 0.881 C29 I6H 13 I6H C28 C12 C 0 1 N N N 97.498 102.433 109.078 -4.287 -3.036 -1.154 C28 I6H 14 I6H C3 C13 C 0 1 N N N 95.945 103.655 107.461 -3.340 -0.531 -2.262 C3 I6H 15 I6H N4 N1 N 0 1 N N N 96.255 103.481 106.387 -3.452 -0.313 -3.371 N4 I6H 16 I6H C22 C14 C 0 1 N N N 95.978 105.211 109.446 -1.954 -0.098 -0.287 C22 I6H 17 I6H C26 C15 C 0 1 N N N 95.008 105.785 110.481 -0.732 -0.508 -1.112 C26 I6H 18 I6H C25 C16 C 0 1 N N N 95.217 107.271 110.770 0.522 0.141 -0.524 C25 I6H 19 I6H N8 N2 N 0 1 N N N 94.482 107.580 111.979 1.695 -0.253 -1.316 N8 I6H 20 I6H C27 C17 C 0 1 N N N 94.993 106.755 113.056 1.621 0.299 -2.675 C27 I6H 21 I6H C16 C18 C 0 1 N N N 94.619 108.983 112.317 2.940 0.153 -0.650 C16 I6H 22 I6H C21 C19 C 0 1 N N N 93.561 109.357 113.355 4.132 -0.484 -1.366 C21 I6H 23 I6H C17 C20 C 0 1 Y N N 92.980 110.751 113.139 5.410 -0.068 -0.683 C17 I6H 24 I6H C12 C21 C 0 1 Y N N 93.686 111.877 113.514 5.919 -0.830 0.351 C12 I6H 25 I6H C18 C22 C 0 1 Y N N 91.738 110.880 112.565 6.073 1.073 -1.097 C18 I6H 26 I6H C14 C23 C 0 1 Y N N 91.197 112.132 112.357 7.245 1.459 -0.474 C14 I6H 27 I6H C10 C24 C 0 1 Y N N 91.896 113.259 112.730 7.758 0.702 0.567 C10 I6H 28 I6H O24 O3 O 0 1 N N N 91.324 114.516 112.509 8.911 1.080 1.181 O24 I6H 29 I6H C33 C25 C 0 1 N N N 90.354 114.516 111.504 9.542 2.269 0.701 C33 I6H 30 I6H C7 C26 C 0 1 Y N N 93.147 113.136 113.311 7.093 -0.449 0.980 C7 I6H 31 I6H O20 O4 O 0 1 N N N 93.864 114.276 113.693 7.593 -1.195 2.001 O20 I6H 32 I6H C31 C27 C 0 1 N N N 95.237 114.058 113.833 6.857 -2.363 2.371 C31 I6H 33 I6H H1 H1 H 0 1 N N N 91.474 105.714 104.998 -5.709 4.681 -0.177 H1 I6H 34 I6H H2 H2 H 0 1 N N N 92.712 106.074 106.248 -4.328 3.616 0.180 H2 I6H 35 I6H H3 H3 H 0 1 N N N 92.697 104.473 105.435 -5.316 3.336 -1.274 H3 I6H 36 I6H H4 H4 H 0 1 N N N 93.803 104.775 107.072 -4.130 1.716 -0.678 H4 I6H 37 I6H H5 H5 H 0 1 N N N 88.245 102.920 110.047 -8.882 -0.709 1.951 H5 I6H 38 I6H H6 H6 H 0 1 N N N 89.737 101.926 110.165 -7.888 -0.427 3.400 H6 I6H 39 I6H H7 H7 H 0 1 N N N 89.657 103.526 110.978 -9.364 0.531 3.133 H7 I6H 40 I6H H8 H8 H 0 1 N N N 91.427 102.626 110.805 -6.930 -1.460 1.851 H8 I6H 41 I6H H9 H9 H 0 1 N N N 93.891 102.735 110.818 -4.940 -2.259 0.641 H9 I6H 42 I6H H10 H10 H 0 1 N N N 95.507 101.850 109.656 -2.163 -2.677 -1.142 H10 I6H 43 I6H H11 H11 H 0 1 N N N 96.773 102.335 111.729 -3.578 -1.975 1.446 H11 I6H 44 I6H H12 H12 H 0 1 N N N 96.955 104.048 111.221 -3.144 -3.660 1.072 H12 I6H 45 I6H H13 H13 H 0 1 N N N 95.326 103.390 111.595 -1.873 -2.419 1.191 H13 I6H 46 I6H H14 H14 H 0 1 N N N 97.987 101.624 109.640 -4.199 -3.149 -2.234 H14 I6H 47 I6H H15 H15 H 0 1 N N N 97.353 102.118 108.034 -4.370 -4.020 -0.691 H15 I6H 48 I6H H16 H16 H 0 1 N N N 98.131 103.332 109.105 -5.175 -2.449 -0.921 H16 I6H 49 I6H H17 H17 H 0 1 N N N 96.964 105.083 109.917 -2.095 0.980 -0.359 H17 I6H 50 I6H H18 H18 H 0 1 N N N 96.061 105.918 108.608 -1.798 -0.376 0.756 H18 I6H 51 I6H H19 H19 H 0 1 N N N 93.982 105.646 110.109 -0.625 -1.593 -1.088 H19 I6H 52 I6H H20 H20 H 0 1 N N N 95.136 105.228 111.421 -0.862 -0.179 -2.143 H20 I6H 53 I6H H21 H21 H 0 1 N N N 96.287 107.480 110.916 0.415 1.225 -0.547 H21 I6H 54 I6H H22 H22 H 0 1 N N N 94.836 107.875 109.933 0.652 -0.189 0.507 H22 I6H 55 I6H H24 H24 H 0 1 N N N 94.444 106.979 113.982 1.583 1.387 -2.625 H24 I6H 56 I6H H25 H25 H 0 1 N N N 94.861 105.694 112.799 2.501 -0.008 -3.240 H25 I6H 57 I6H H26 H26 H 0 1 N N N 96.062 106.966 113.204 0.724 -0.074 -3.170 H26 I6H 58 I6H H27 H27 H 0 1 N N N 95.621 109.165 112.732 3.033 1.239 -0.684 H27 I6H 59 I6H H28 H28 H 0 1 N N N 94.480 109.594 111.413 2.921 -0.177 0.389 H28 I6H 60 I6H H29 H29 H 0 1 N N N 92.743 108.624 113.301 4.039 -1.569 -1.332 H29 I6H 61 I6H H30 H30 H 0 1 N N N 94.021 109.320 114.353 4.151 -0.154 -2.405 H30 I6H 62 I6H H31 H31 H 0 1 N N N 94.661 111.775 113.967 5.401 -1.723 0.670 H31 I6H 63 I6H H32 H32 H 0 1 N N N 91.184 109.999 112.276 5.674 1.663 -1.908 H32 I6H 64 I6H H33 H33 H 0 1 N N N 90.223 112.229 111.901 7.761 2.350 -0.799 H33 I6H 65 I6H H34 H34 H 0 1 N N N 89.949 115.532 111.385 9.797 2.145 -0.351 H34 I6H 66 I6H H35 H35 H 0 1 N N N 90.808 114.189 110.557 8.860 3.112 0.813 H35 I6H 67 I6H H36 H36 H 0 1 N N N 89.541 113.827 111.779 10.449 2.456 1.276 H36 I6H 68 I6H H37 H37 H 0 1 N N N 95.729 114.995 114.133 5.852 -2.077 2.681 H37 I6H 69 I6H H38 H38 H 0 1 N N N 95.410 113.291 114.602 6.796 -3.039 1.518 H38 I6H 70 I6H H39 H39 H 0 1 N N N 95.654 113.716 112.874 7.363 -2.865 3.196 H39 I6H 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I6H C30 O19 SING N N 1 I6H N4 C3 TRIP N N 2 I6H O19 C6 SING N N 3 I6H C3 C1 SING N N 4 I6H C6 C5 DOUB Y N 5 I6H C6 C9 SING Y N 6 I6H C5 C2 SING Y N 7 I6H C1 C2 SING N N 8 I6H C1 C22 SING N N 9 I6H C1 C15 SING N N 10 I6H C9 O23 SING N N 11 I6H C9 C13 DOUB Y N 12 I6H O23 C32 SING N N 13 I6H C2 C11 DOUB Y N 14 I6H C28 C15 SING N N 15 I6H C22 C26 SING N N 16 I6H C15 C29 SING N N 17 I6H C13 C11 SING Y N 18 I6H C26 C25 SING N N 19 I6H C25 N8 SING N N 20 I6H C33 O24 SING N N 21 I6H N8 C16 SING N N 22 I6H N8 C27 SING N N 23 I6H C16 C21 SING N N 24 I6H C14 C18 DOUB Y N 25 I6H C14 C10 SING Y N 26 I6H O24 C10 SING N N 27 I6H C18 C17 SING Y N 28 I6H C10 C7 DOUB Y N 29 I6H C17 C21 SING N N 30 I6H C17 C12 DOUB Y N 31 I6H C7 C12 SING Y N 32 I6H C7 O20 SING N N 33 I6H O20 C31 SING N N 34 I6H C30 H1 SING N N 35 I6H C30 H2 SING N N 36 I6H C30 H3 SING N N 37 I6H C5 H4 SING N N 38 I6H C32 H5 SING N N 39 I6H C32 H6 SING N N 40 I6H C32 H7 SING N N 41 I6H C13 H8 SING N N 42 I6H C11 H9 SING N N 43 I6H C15 H10 SING N N 44 I6H C29 H11 SING N N 45 I6H C29 H12 SING N N 46 I6H C29 H13 SING N N 47 I6H C28 H14 SING N N 48 I6H C28 H15 SING N N 49 I6H C28 H16 SING N N 50 I6H C22 H17 SING N N 51 I6H C22 H18 SING N N 52 I6H C26 H19 SING N N 53 I6H C26 H20 SING N N 54 I6H C25 H21 SING N N 55 I6H C25 H22 SING N N 56 I6H C27 H24 SING N N 57 I6H C27 H25 SING N N 58 I6H C27 H26 SING N N 59 I6H C16 H27 SING N N 60 I6H C16 H28 SING N N 61 I6H C21 H29 SING N N 62 I6H C21 H30 SING N N 63 I6H C12 H31 SING N N 64 I6H C18 H32 SING N N 65 I6H C14 H33 SING N N 66 I6H C33 H34 SING N N 67 I6H C33 H35 SING N N 68 I6H C33 H36 SING N N 69 I6H C31 H37 SING N N 70 I6H C31 H38 SING N N 71 I6H C31 H39 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I6H InChI InChI 1.06 "InChI=1S/C27H38N2O4/c1-20(2)27(19-28,22-10-12-24(31-5)26(18-22)33-7)14-8-15-29(3)16-13-21-9-11-23(30-4)25(17-21)32-6/h9-12,17-18,20H,8,13-16H2,1-7H3/t27-/m1/s1" I6H InChIKey InChI 1.06 SGTNSNPWRIOYBX-HHHXNRCGSA-N I6H SMILES_CANONICAL CACTVS 3.385 "COc1ccc(CCN(C)CCC[C@@](C#N)(C(C)C)c2ccc(OC)c(OC)c2)cc1OC" I6H SMILES CACTVS 3.385 "COc1ccc(CCN(C)CCC[C](C#N)(C(C)C)c2ccc(OC)c(OC)c2)cc1OC" I6H SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@](CCCN(C)CCc1ccc(c(c1)OC)OC)(C#N)c2ccc(c(c2)OC)OC" I6H SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C(CCCN(C)CCc1ccc(c(c1)OC)OC)(C#N)c2ccc(c(c2)OC)OC" # _pdbx_chem_comp_identifier.comp_id I6H _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R})-2-(3,4-dimethoxyphenyl)-5-[2-(3,4-dimethoxyphenyl)ethyl-methyl-amino]-2-propan-2-yl-pentanenitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I6H "Create component" 2022-02-15 PDBE I6H "Modify descriptor" 2022-08-22 RCSB I6H "Initial release" 2022-10-26 RCSB #