data_I6Q # _chem_comp.id I6Q _chem_comp.name "N~1~-[(1R,2R)-5-{[(3R)-3-aminopyrrolidin-1-yl]methyl}-2-(carbamimidamidomethyl)-2,3-dihydro-1H-inden-1-yl]-N~2~-(4-chloro-3-fluorophenyl)ethanediamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H29 Cl F N7 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-01-18 _chem_comp.pdbx_modified_date 2023-01-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 501.984 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I6Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7TJO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I6Q C10 C1 C 0 1 Y N N -24.200 6.266 -75.707 6.180 1.010 -0.830 C10 I6Q 1 I6Q C15 C2 C 0 1 N N R -27.110 -1.183 -75.755 -1.052 -1.993 0.503 C15 I6Q 2 I6Q C17 C3 C 0 1 Y N N -29.110 -2.179 -75.002 -2.866 -0.637 -0.194 C17 I6Q 3 I6Q C20 C4 C 0 1 N N N -27.513 -2.370 -77.973 -2.678 -3.864 -0.005 C20 I6Q 4 I6Q C22 C5 C 0 1 N N N -25.416 -3.137 -78.992 -4.232 -5.606 -0.780 C22 I6Q 5 I6Q C26 C6 C 0 1 Y N N -29.494 -3.192 -72.767 -3.811 1.224 0.985 C26 I6Q 6 I6Q C02 C7 C 0 1 N N N -25.777 0.712 -76.066 1.227 -1.222 0.890 C02 I6Q 7 I6Q C03 C8 C 0 1 N N N -25.513 2.216 -75.984 2.549 -0.738 0.392 C03 I6Q 8 I6Q C05 C9 C 0 1 Y N N -23.985 4.085 -76.474 4.798 -0.082 0.800 C05 I6Q 9 I6Q C06 C10 C 0 1 Y N N -23.388 4.592 -77.640 5.933 -0.463 1.505 C06 I6Q 10 I6Q C07 C11 C 0 1 Y N N -23.142 5.943 -77.830 7.184 -0.097 1.048 C07 I6Q 11 I6Q C08 C12 C 0 1 Y N N -23.576 6.752 -76.820 7.310 0.633 -0.121 C08 I6Q 12 I6Q C12 C13 C 0 1 Y N N -24.453 4.918 -75.487 4.924 0.656 -0.370 C12 I6Q 13 I6Q C16 C14 C 0 1 Y N N -27.854 -1.879 -74.582 -1.952 -0.820 0.826 C16 I6Q 14 I6Q C18 C15 C 0 1 N N N -29.318 -1.681 -76.455 -2.642 -1.675 -1.274 C18 I6Q 15 I6Q C19 C16 C 0 1 N N R -27.976 -1.295 -76.992 -1.788 -2.774 -0.606 C19 I6Q 16 I6Q C25 C17 C 0 1 Y N N -29.947 -2.848 -74.070 -3.796 0.386 -0.112 C25 I6Q 17 I6Q C27 C18 C 0 1 N N N -30.528 -3.898 -71.874 -4.824 2.337 1.070 C27 I6Q 18 I6Q C29 C19 C 0 1 N N N -31.283 -5.155 -70.437 -4.259 3.448 -1.023 C29 I6Q 19 I6Q C30 C20 C 0 1 N N N -31.265 -6.323 -70.992 -4.186 4.909 -1.517 C30 I6Q 20 I6Q C31 C21 C 0 1 N N R -29.729 -6.686 -71.167 -4.762 5.753 -0.362 C31 I6Q 21 I6Q C33 C22 C 0 1 N N N -29.163 -5.592 -71.537 -5.135 4.731 0.734 C33 I6Q 22 I6Q C34 C23 C 0 1 Y N N -28.200 -2.876 -72.360 -2.897 1.041 2.006 C34 I6Q 23 I6Q C35 C24 C 0 1 Y N N -27.359 -2.211 -73.266 -1.970 0.021 1.926 C35 I6Q 24 I6Q F11 F1 F 0 1 N N N -24.558 7.201 -74.803 6.305 1.728 -1.967 F11 I6Q 25 I6Q N04 N1 N 0 1 N N N -24.206 2.632 -76.459 3.531 -0.441 1.267 N04 I6Q 26 I6Q N14 N2 N 0 1 N N N -27.066 0.199 -75.565 0.246 -1.519 0.015 N14 I6Q 27 I6Q N21 N3 N 0 1 N N N -26.324 -2.013 -78.728 -3.372 -4.576 -1.081 N21 I6Q 28 I6Q N23 N4 N 0 1 N N N -24.139 -2.993 -79.739 -4.430 -5.948 0.462 N23 I6Q 29 I6Q N24 N5 N 0 1 N N N -25.777 -4.266 -78.526 -4.884 -6.274 -1.790 N24 I6Q 30 I6Q N28 N6 N 0 1 N N N -30.103 -4.472 -71.060 -4.269 3.552 0.459 N28 I6Q 31 I6Q N32 N7 N 0 1 N N N -29.549 -7.873 -72.188 -5.956 6.483 -0.809 N32 I6Q 32 I6Q O01 O1 O 0 1 N N N -24.969 -0.033 -76.498 1.036 -1.347 2.081 O01 I6Q 33 I6Q O13 O2 O 0 1 N N N -26.317 2.976 -75.546 2.741 -0.613 -0.800 O13 I6Q 34 I6Q CL09 CL1 CL 0 0 N N N -23.389 8.510 -76.851 8.885 1.077 -0.700 CL09 I6Q 35 I6Q H1 H1 H 0 1 N N N -26.119 -1.634 -75.914 -0.918 -2.621 1.384 H1 I6Q 36 I6Q H2 H2 H 0 1 N N N -28.329 -2.562 -78.685 -2.062 -4.566 0.557 H2 I6Q 37 I6Q H3 H3 H 0 1 N N N -27.299 -3.287 -77.404 -3.411 -3.409 0.661 H3 I6Q 38 I6Q H4 H4 H 0 1 N N N -23.109 3.900 -78.421 5.837 -1.036 2.414 H4 I6Q 39 I6Q H5 H5 H 0 1 N N N -22.645 6.326 -78.709 8.066 -0.394 1.596 H5 I6Q 40 I6Q H6 H6 H 0 1 N N N -24.974 4.555 -74.613 4.044 0.954 -0.919 H6 I6Q 41 I6Q H7 H7 H 0 1 N N N -29.990 -0.810 -76.461 -3.596 -2.087 -1.606 H7 I6Q 42 I6Q H8 H8 H 0 1 N N N -29.752 -2.484 -77.069 -2.107 -1.236 -2.115 H8 I6Q 43 I6Q H9 H9 H 0 1 N N N -28.034 -0.322 -77.502 -1.082 -3.201 -1.318 H9 I6Q 44 I6Q H10 H10 H 0 1 N N N -30.956 -3.103 -74.359 -4.510 0.529 -0.910 H10 I6Q 45 I6Q H11 H11 H 0 1 N N N -31.191 -3.132 -71.445 -5.730 2.045 0.539 H11 I6Q 46 I6Q H12 H12 H 0 1 N N N -31.117 -4.581 -72.504 -5.062 2.532 2.115 H12 I6Q 47 I6Q H13 H13 H 0 1 N N N -31.165 -5.233 -69.346 -5.174 2.973 -1.377 H13 I6Q 48 I6Q H14 H14 H 0 1 N N N -32.217 -4.621 -70.668 -3.386 2.889 -1.359 H14 I6Q 49 I6Q H15 H15 H 0 1 N N N -31.766 -6.291 -71.971 -3.151 5.191 -1.712 H15 I6Q 50 I6Q H16 H16 H 0 1 N N N -31.764 -7.062 -70.348 -4.788 5.035 -2.417 H16 I6Q 51 I6Q H17 H17 H 0 1 N N N -29.357 -7.028 -70.190 -4.010 6.449 0.010 H17 I6Q 52 I6Q H18 H18 H 0 1 N N N -28.173 -5.491 -71.067 -4.921 5.137 1.722 H18 I6Q 53 I6Q H19 H19 H 0 1 N N N -29.054 -5.565 -72.631 -6.187 4.456 0.654 H19 I6Q 54 I6Q H20 H20 H 0 1 N N N -27.852 -3.136 -71.371 -2.908 1.696 2.865 H20 I6Q 55 I6Q H21 H21 H 0 1 N N N -26.350 -1.950 -72.982 -1.256 -0.121 2.724 H21 I6Q 56 I6Q H22 H22 H 0 1 N N N -23.508 1.979 -76.754 3.357 -0.476 2.220 H22 I6Q 57 I6Q H23 H23 H 0 1 N N N -27.791 0.752 -75.155 0.398 -1.419 -0.938 H23 I6Q 58 I6Q H24 H24 H 0 1 N N N -26.140 -1.081 -79.041 -3.225 -4.322 -2.005 H24 I6Q 59 I6Q H25 H25 H 0 1 N N N -23.647 -3.861 -79.811 -5.037 -6.674 0.674 H25 I6Q 60 I6Q H26 H26 H 0 1 N N N -26.633 -4.346 -78.016 -4.737 -6.019 -2.714 H26 I6Q 61 I6Q H27 H27 H 0 1 N N N -25.204 -5.073 -78.670 -5.491 -7.000 -1.578 H27 I6Q 62 I6Q H29 H29 H 0 1 N N N -30.012 -8.687 -71.838 -5.730 7.121 -1.558 H29 I6Q 63 I6Q H30 H30 H 0 1 N N N -29.946 -7.617 -73.070 -6.687 5.846 -1.086 H30 I6Q 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I6Q N23 C22 DOUB N N 1 I6Q C22 N21 SING N N 2 I6Q C22 N24 SING N N 3 I6Q N21 C20 SING N N 4 I6Q C20 C19 SING N N 5 I6Q C07 C06 DOUB Y N 6 I6Q C07 C08 SING Y N 7 I6Q C06 C05 SING Y N 8 I6Q C19 C18 SING N N 9 I6Q C19 C15 SING N N 10 I6Q CL09 C08 SING N N 11 I6Q C08 C10 DOUB Y N 12 I6Q O01 C02 DOUB N N 13 I6Q C05 N04 SING N N 14 I6Q C05 C12 DOUB Y N 15 I6Q N04 C03 SING N N 16 I6Q C18 C17 SING N N 17 I6Q C02 C03 SING N N 18 I6Q C02 N14 SING N N 19 I6Q C03 O13 DOUB N N 20 I6Q C15 N14 SING N N 21 I6Q C15 C16 SING N N 22 I6Q C10 C12 SING Y N 23 I6Q C10 F11 SING N N 24 I6Q C17 C16 DOUB Y N 25 I6Q C17 C25 SING Y N 26 I6Q C16 C35 SING Y N 27 I6Q C25 C26 DOUB Y N 28 I6Q C35 C34 DOUB Y N 29 I6Q C26 C34 SING Y N 30 I6Q C26 C27 SING N N 31 I6Q N32 C31 SING N N 32 I6Q C27 N28 SING N N 33 I6Q C33 C31 SING N N 34 I6Q C33 N28 SING N N 35 I6Q C31 C30 SING N N 36 I6Q N28 C29 SING N N 37 I6Q C30 C29 SING N N 38 I6Q C15 H1 SING N N 39 I6Q C20 H2 SING N N 40 I6Q C20 H3 SING N N 41 I6Q C06 H4 SING N N 42 I6Q C07 H5 SING N N 43 I6Q C12 H6 SING N N 44 I6Q C18 H7 SING N N 45 I6Q C18 H8 SING N N 46 I6Q C19 H9 SING N N 47 I6Q C25 H10 SING N N 48 I6Q C27 H11 SING N N 49 I6Q C27 H12 SING N N 50 I6Q C29 H13 SING N N 51 I6Q C29 H14 SING N N 52 I6Q C30 H15 SING N N 53 I6Q C30 H16 SING N N 54 I6Q C31 H17 SING N N 55 I6Q C33 H18 SING N N 56 I6Q C33 H19 SING N N 57 I6Q C34 H20 SING N N 58 I6Q C35 H21 SING N N 59 I6Q N04 H22 SING N N 60 I6Q N14 H23 SING N N 61 I6Q N21 H24 SING N N 62 I6Q N23 H25 SING N N 63 I6Q N24 H26 SING N N 64 I6Q N24 H27 SING N N 65 I6Q N32 H29 SING N N 66 I6Q N32 H30 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I6Q SMILES ACDLabs 12.01 "Clc1ccc(cc1F)NC(=O)C(=O)NC1c2ccc(cc2CC1CNC(=N)N)CN1CCC(N)C1" I6Q InChI InChI 1.03 "InChI=1S/C24H29ClFN7O2/c25-19-4-2-17(9-20(19)26)31-22(34)23(35)32-21-15(10-30-24(28)29)8-14-7-13(1-3-18(14)21)11-33-6-5-16(27)12-33/h1-4,7,9,15-16,21H,5-6,8,10-12,27H2,(H,31,34)(H,32,35)(H4,28,29,30)/t15-,16-,21-/m1/s1" I6Q InChIKey InChI 1.03 UJGBLAVDKVSVBC-WHSLLNHNSA-N I6Q SMILES_CANONICAL CACTVS 3.385 "N[C@@H]1CCN(C1)Cc2ccc3[C@H](NC(=O)C(=O)Nc4ccc(Cl)c(F)c4)[C@@H](CNC(N)=N)Cc3c2" I6Q SMILES CACTVS 3.385 "N[CH]1CCN(C1)Cc2ccc3[CH](NC(=O)C(=O)Nc4ccc(Cl)c(F)c4)[CH](CNC(N)=N)Cc3c2" I6Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(\N)/NC[C@H]1Cc2cc(ccc2[C@@H]1NC(=O)C(=O)Nc3ccc(c(c3)F)Cl)CN4CC[C@H](C4)N" I6Q SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1CN3CCC(C3)N)CC(C2NC(=O)C(=O)Nc4ccc(c(c4)F)Cl)CNC(=N)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier I6Q "SYSTEMATIC NAME" ACDLabs 12.01 "N~1~-[(1R,2R)-5-{[(3R)-3-aminopyrrolidin-1-yl]methyl}-2-(carbamimidamidomethyl)-2,3-dihydro-1H-inden-1-yl]-N~2~-(4-chloro-3-fluorophenyl)ethanediamide" I6Q "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}'-[(1~{R},2~{R})-5-[[(3~{R})-3-azanylpyrrolidin-1-yl]methyl]-2-(carbamimidamidomethyl)-2,3-dihydro-1~{H}-inden-1-yl]-~{N}-(4-chloranyl-3-fluoranyl-phenyl)ethanediamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I6Q "Create component" 2022-01-18 RCSB I6Q "Initial release" 2023-01-25 RCSB #