data_I7P # _chem_comp.id I7P _chem_comp.name "(1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H19 O27 P7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "1D-myo-inositol 5-diphosphate 1,2,3,4,6-pentakisphosphate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-08-08 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 740.015 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I7P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3T9D _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I7P C1 C1 C 0 1 N N R 0.985 19.147 10.061 1.445 1.400 0.642 C1 I7P 1 I7P C2 C2 C 0 1 N N N -0.490 19.509 9.836 2.381 0.270 0.206 C2 I7P 2 I7P C3 C3 C 0 1 N N S -1.214 19.445 11.200 1.792 -1.075 0.637 C3 I7P 3 I7P C4 C4 C 0 1 N N R -0.615 20.423 12.210 0.423 -1.265 -0.019 C4 I7P 4 I7P C5 C5 C 0 1 N N N 0.891 20.203 12.364 -0.513 -0.136 0.417 C5 I7P 5 I7P C6 C6 C 0 1 N N S 1.639 20.144 11.024 0.076 1.209 -0.014 C6 I7P 6 I7P O11 O11 O 0 1 N N N 1.690 19.154 8.810 1.995 2.655 0.240 O11 I7P 7 I7P O12 O12 O 0 1 N N N -0.586 20.823 9.291 2.526 0.293 -1.215 O12 I7P 8 I7P O13 O13 O 0 1 N N N -2.617 19.719 11.054 2.666 -2.130 0.230 O13 I7P 9 I7P O14 O14 O 0 1 N N N -1.201 20.122 13.465 -0.128 -2.521 0.383 O14 I7P 10 I7P O15 O15 O 0 1 N N N 1.444 21.264 13.151 -1.792 -0.314 -0.196 O15 I7P 11 I7P O16 O16 O 0 1 N N N 2.967 19.709 11.307 -0.798 2.264 0.393 O16 I7P 12 I7P O21 O21 O 0 1 N N N 2.573 16.696 9.154 3.083 5.035 0.499 O21 I7P 13 I7P O22 O22 O 0 1 N N N -2.666 20.797 7.748 3.717 0.598 -3.539 O22 I7P 14 I7P O23 O23 O 0 1 N N N -3.454 18.036 12.794 4.366 -4.120 0.480 O23 I7P 15 I7P O24 O24 O 0 1 N N N -3.710 20.643 13.734 -1.216 -4.901 0.124 O24 I7P 16 I7P O25 O25 O 0 1 N N N 1.764 19.577 15.081 -3.308 0.625 1.591 O25 I7P 17 I7P O26 O26 O 0 1 N N N 5.357 20.273 12.023 -2.495 2.483 -1.603 O26 I7P 18 I7P O31 O31 O 0 1 N N N 0.558 17.188 7.602 1.030 4.358 1.995 O31 I7P 19 I7P O32 O32 O 0 1 N N N -0.416 20.061 6.757 4.583 1.736 -1.459 O32 I7P 20 I7P O33 O33 O 0 1 N N N -3.151 17.308 10.298 4.090 -2.390 2.297 O33 I7P 21 I7P O34 O34 O 0 1 N N N -2.019 22.602 13.611 -1.427 -3.154 -1.686 O34 I7P 22 I7P O35 O35 O 0 1 N N N 1.022 21.994 15.513 -3.078 -1.886 1.474 O35 I7P 23 I7P O36 O36 O 0 1 N N N 3.799 22.206 11.308 -2.290 4.416 0.167 O36 I7P 24 I7P O41 O41 O 0 1 N N N 2.950 17.951 6.913 3.295 3.289 2.309 O41 I7P 25 I7P O42 O42 O 0 1 N N N -0.755 22.516 7.386 4.898 -0.763 -1.625 O42 I7P 26 I7P O43 O43 O 0 1 N N N -5.065 18.964 10.910 2.207 -4.039 1.978 O43 I7P 27 I7P O44 O44 O 0 1 N N N -2.065 21.033 15.695 0.837 -4.224 -1.372 O44 I7P 28 I7P O45 O45 O 0 1 N N N 3.368 21.455 14.705 -4.406 -0.546 -0.357 O45 I7P 29 I7P O46 O46 O 0 1 N N N 4.653 20.530 9.562 -0.431 3.929 -1.468 O46 I7P 30 I7P O55 O55 O 0 1 N N N 3.618 22.277 17.150 -6.294 1.272 -0.154 O55 I7P 31 I7P O65 O65 O 0 1 N N N 5.542 22.600 15.476 -6.774 -0.987 -1.410 O65 I7P 32 I7P O75 O75 O 0 1 N N N 3.342 23.990 15.203 -6.439 -0.919 1.090 O75 I7P 33 I7P PA1 PA1 P 0 1 N N N 2.004 17.754 8.049 2.371 3.823 1.283 PA1 I7P 34 I7P PA2 PA2 P 0 1 N N N -1.090 21.133 7.759 3.945 0.493 -1.949 PA2 I7P 35 I7P PA3 PA3 P 0 1 N N N -3.678 18.515 11.252 3.348 -3.153 1.269 PA3 I7P 36 I7P PA4 PA4 P 0 1 N N N -2.242 21.117 14.224 -0.504 -3.688 -0.660 PA4 I7P 37 I7P PA5 PA5 P 0 1 N N N 1.813 21.020 14.724 -3.149 -0.506 0.649 PA5 I7P 38 I7P PA6 PA6 P 0 1 N N N 4.205 20.669 10.971 -1.480 3.287 -0.646 PA6 I7P 39 I7P PB5 PB5 P 0 1 N N N 3.920 22.679 15.610 -5.988 -0.308 -0.180 PB5 I7P 40 I7P H1 H1 H 0 1 N N N 1.034 18.140 10.501 1.335 1.382 1.726 H1 I7P 41 I7P H2 H2 H 0 1 N N N -0.954 18.805 9.129 3.356 0.406 0.673 H2 I7P 42 I7P H3 H3 H 0 1 N N N -1.078 18.421 11.579 1.681 -1.093 1.721 H3 I7P 43 I7P H4 H4 H 0 1 N N N -0.800 21.454 11.874 0.533 -1.247 -1.103 H4 I7P 44 I7P H5 H5 H 0 1 N N N 1.019 19.226 12.853 -0.624 -0.154 1.501 H5 I7P 45 I7P H6 H6 H 0 1 N N N 1.620 21.134 10.546 0.187 1.227 -1.098 H6 I7P 46 I7P HO21 HO21 H 0 0 N N N 3.426 16.380 8.880 3.338 5.775 1.066 HO21 I7P 47 I7P HO22 HO22 H 0 0 N N N -2.830 20.063 7.168 4.532 0.720 -4.046 HO22 I7P 48 I7P HO23 HO23 H 0 0 N N N -3.069 17.167 12.804 4.814 -4.764 1.045 HO23 I7P 49 I7P HO24 HO24 H 0 0 N N N -4.105 21.328 13.207 -1.470 -5.641 -0.444 HO24 I7P 50 I7P HO26 HO26 H 0 0 N N N 6.140 20.013 11.553 -3.211 2.036 -1.130 HO26 I7P 51 I7P HO31 HO31 H 0 0 N N N 0.542 17.068 6.660 0.378 4.723 1.381 HO31 I7P 52 I7P HO35 HO35 H 0 0 N N N 0.549 21.537 16.198 -2.974 -2.671 0.918 HO35 I7P 53 I7P HO36 HO36 H 0 0 N N N 3.923 22.744 10.535 -2.728 5.069 -0.397 HO36 I7P 54 I7P HO42 HO42 H 0 0 N N N -0.198 22.511 6.616 4.543 -1.613 -1.919 HO42 I7P 55 I7P HO43 HO43 H 0 0 N N N -5.394 18.451 10.181 1.679 -4.567 1.362 HO43 I7P 56 I7P HO44 HO44 H 0 0 N N N -1.844 21.891 16.037 1.490 -4.589 -0.759 HO44 I7P 57 I7P HO55 HO55 H 0 0 N N N 3.105 22.962 17.562 -6.024 1.738 -0.957 HO55 I7P 58 I7P HO65 HO65 H 0 0 N N N 5.874 23.428 15.149 -7.734 -0.883 -1.369 HO65 I7P 59 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I7P O11 C1 SING N N 1 I7P C2 C1 SING N N 2 I7P C1 C6 SING N N 3 I7P C1 H1 SING N N 4 I7P O12 C2 SING N N 5 I7P C2 C3 SING N N 6 I7P C2 H2 SING N N 7 I7P O13 C3 SING N N 8 I7P C3 C4 SING N N 9 I7P C3 H3 SING N N 10 I7P C4 C5 SING N N 11 I7P C4 O14 SING N N 12 I7P C4 H4 SING N N 13 I7P C6 C5 SING N N 14 I7P C5 O15 SING N N 15 I7P C5 H5 SING N N 16 I7P C6 O16 SING N N 17 I7P C6 H6 SING N N 18 I7P PA1 O11 SING N N 19 I7P PA2 O12 SING N N 20 I7P O13 PA3 SING N N 21 I7P O14 PA4 SING N N 22 I7P O15 PA5 SING N N 23 I7P PA6 O16 SING N N 24 I7P PA1 O21 SING N N 25 I7P O21 HO21 SING N N 26 I7P O22 PA2 SING N N 27 I7P O22 HO22 SING N N 28 I7P PA3 O23 SING N N 29 I7P O23 HO23 SING N N 30 I7P O24 PA4 SING N N 31 I7P O24 HO24 SING N N 32 I7P PA5 O25 DOUB N N 33 I7P PA6 O26 SING N N 34 I7P O26 HO26 SING N N 35 I7P O31 PA1 SING N N 36 I7P O31 HO31 SING N N 37 I7P O32 PA2 DOUB N N 38 I7P O33 PA3 DOUB N N 39 I7P O34 PA4 DOUB N N 40 I7P PA5 O35 SING N N 41 I7P O35 HO35 SING N N 42 I7P PA6 O36 SING N N 43 I7P O36 HO36 SING N N 44 I7P O41 PA1 DOUB N N 45 I7P O42 PA2 SING N N 46 I7P O42 HO42 SING N N 47 I7P O43 PA3 SING N N 48 I7P O43 HO43 SING N N 49 I7P PA4 O44 SING N N 50 I7P O44 HO44 SING N N 51 I7P O45 PA5 SING N N 52 I7P O45 PB5 SING N N 53 I7P O46 PA6 DOUB N N 54 I7P PB5 O55 SING N N 55 I7P O55 HO55 SING N N 56 I7P O65 PB5 SING N N 57 I7P O65 HO65 SING N N 58 I7P O75 PB5 DOUB N N 59 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I7P SMILES ACDLabs 12.01 "O=P(O)(O)OC1C(OP(=O)(O)O)C(OP(=O)(O)O)C(OP(=O)(O)O)C(OP(=O)(O)O)C1OP(=O)(OP(=O)(O)O)O" I7P InChI InChI 1.03 "InChI=1S/C6H19O27P7/c7-34(8,9)27-1-2(28-35(10,11)12)4(30-37(16,17)18)6(32-40(25,26)33-39(22,23)24)5(31-38(19,20)21)3(1)29-36(13,14)15/h1-6H,(H,25,26)(H2,7,8,9)(H2,10,11,12)(H2,13,14,15)(H2,16,17,18)(H2,19,20,21)(H2,22,23,24)/t1-,2+,3-,4-,5+,6+" I7P InChIKey InChI 1.03 UPHPWXPNZIOZJL-KXXVROSKSA-N I7P SMILES_CANONICAL CACTVS 3.370 "O[P](O)(=O)O[C@H]1[C@@H](O[P](O)(O)=O)[C@H](O[P](O)(O)=O)[C@@H](O[P](O)(=O)O[P](O)(O)=O)[C@H](O[P](O)(O)=O)[C@H]1O[P](O)(O)=O" I7P SMILES CACTVS 3.370 "O[P](O)(=O)O[CH]1[CH](O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH](O[P](O)(=O)O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH]1O[P](O)(O)=O" I7P SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "[C@H]1([C@H](C([C@H]([C@@H](C1OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O" I7P SMILES "OpenEye OEToolkits" 1.7.2 "C1(C(C(C(C(C1OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier I7P "SYSTEMATIC NAME" ACDLabs 12.01 "(1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate" I7P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "[(2S,3R,5S,6R)-2,3,4,5,6-pentaphosphonooxycyclohexyl] phosphono hydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I7P "Create component" 2011-08-08 RCSB I7P "Modify synonyms" 2011-08-09 RCSB I7P "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id I7P _pdbx_chem_comp_synonyms.name "1D-myo-inositol 5-diphosphate 1,2,3,4,6-pentakisphosphate" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##