data_I8K # _chem_comp.id I8K _chem_comp.name "[4-[1-[(4~{R})-4-[(3~{R},5~{S},7~{S},8~{R},9~{S},10~{S},13~{R},14~{S},17~{R})-10,13-dimethyl-3,7-bis(oxidanyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]pentanoyl]piperidin-4-yl]oxyphenyl]-bis(oxidanyl)-$l^{4}-borane" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C35 H55 B N O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-02-24 _chem_comp.pdbx_modified_date 2022-08-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 596.625 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I8K _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7Z0N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I8K C8 C1 C 0 1 N N N 19.132 -2.003 -4.704 -6.371 1.411 -0.416 C8 I8K 1 I8K C9 C2 C 0 1 Y N N 20.747 -0.931 -3.228 -8.348 0.161 -0.838 C9 I8K 2 I8K C10 C3 C 0 1 Y N N 21.494 -1.608 -2.275 -9.355 -0.300 -1.673 C10 I8K 3 I8K C11 C4 C 0 1 Y N N 21.733 -1.022 -1.048 -10.289 -1.200 -1.197 C11 I8K 4 I8K C12 C5 C 0 1 Y N N 21.251 0.253 -0.736 -10.220 -1.642 0.111 C12 I8K 5 I8K C13 C6 C 0 1 Y N N 20.479 0.891 -1.711 -9.217 -1.185 0.946 C13 I8K 6 I8K N1 N1 N 0 1 N N N 18.167 -4.430 -6.137 -3.698 2.111 0.191 N1 I8K 7 I8K C6 C7 C 0 1 N N N 19.157 -4.487 -5.053 -4.705 3.181 0.160 C6 I8K 8 I8K C3 C8 C 0 1 N N N 16.308 -7.518 -5.929 0.011 1.851 -0.287 C3 I8K 9 I8K C5 C9 C 0 1 N N N 17.587 -5.485 -6.755 -2.398 2.384 -0.035 C5 I8K 10 I8K C4 C10 C 0 1 N N N 17.672 -6.859 -6.116 -1.378 1.276 -0.000 C4 I8K 11 I8K C2 C11 C 0 1 N N R 16.224 -8.504 -4.749 1.046 0.726 -0.252 C2 I8K 12 I8K C15 C12 C 0 1 N N N 18.931 -2.094 -6.199 -5.256 0.366 -0.503 C15 I8K 13 I8K C16 C13 C 0 1 N N N 17.805 -3.056 -6.511 -4.136 0.737 0.474 C16 I8K 14 I8K C17 C14 C 0 1 N N R 14.971 -9.400 -4.868 2.448 1.317 -0.415 C17 I8K 15 I8K C18 C15 C 0 1 N N N 14.723 -9.946 -6.299 2.727 2.352 0.704 C18 I8K 16 I8K C19 C16 C 0 1 N N N 13.902 -11.244 -6.142 4.003 1.864 1.444 C19 I8K 17 I8K C22 C17 C 0 1 N N S 12.174 -13.496 -4.691 6.845 0.636 1.625 C22 I8K 18 I8K C26 C18 C 0 1 N N R 10.353 -14.281 -0.463 9.577 -1.090 -1.258 C26 I8K 19 I8K C29 C19 C 0 1 N N S 13.040 -14.133 -1.849 7.171 -1.904 0.201 C29 I8K 20 I8K C30 C20 C 0 1 N N N 14.285 -15.026 -2.085 6.456 -2.844 1.175 C30 I8K 21 I8K C31 C21 C 0 1 N N S 13.218 -12.721 -2.501 6.194 -0.835 -0.287 C31 I8K 22 I8K C32 C22 C 0 1 N N N 14.318 -11.868 -1.846 5.056 -1.484 -1.068 C32 I8K 23 I8K C33 C23 C 0 1 N N N 14.550 -10.512 -2.529 4.004 -0.446 -1.493 C33 I8K 24 I8K C34 C24 C 0 1 N N R 14.897 -10.690 -4.005 3.504 0.232 -0.233 C34 I8K 25 I8K C1 C25 C 0 1 N N N 16.279 -7.753 -3.416 0.772 -0.257 -1.392 C1 I8K 26 I8K O1 O1 O 0 1 N N N 16.965 -5.339 -7.808 -2.049 3.522 -0.267 O1 I8K 27 I8K C7 C26 C 0 1 N N N 18.931 -3.363 -4.066 -5.818 2.782 -0.813 C7 I8K 28 I8K O2 O2 O 0 1 N N N 20.500 -1.511 -4.443 -7.432 1.050 -1.302 O2 I8K 29 I8K B1 B1 B 0 1 N N N 21.420 1.014 0.718 -11.273 -2.655 0.645 B1 I8K 30 I8K O3 O3 O 0 1 N N N 22.428 0.369 1.637 -10.828 -3.930 0.431 O3 I8K 31 I8K O4 O4 O 0 1 N N N 21.672 2.451 0.413 -11.459 -2.457 1.984 O4 I8K 32 I8K C14 C27 C 0 1 Y N N 20.228 0.320 -2.939 -8.281 -0.285 0.474 C14 I8K 33 I8K C20 C28 C 0 1 N N S 13.681 -11.394 -4.628 4.702 1.001 0.388 C20 I8K 34 I8K C21 C29 C 0 1 N N R 13.386 -12.798 -4.039 5.669 -0.041 0.919 C21 I8K 35 I8K O5 O5 O 0 1 N N N 12.414 -13.751 -6.096 6.364 1.383 2.743 O5 I8K 36 I8K C23 C30 C 0 1 N N N 11.857 -14.841 -4.023 7.830 -0.431 2.109 C23 I8K 37 I8K C24 C31 C 0 1 N N S 11.794 -14.826 -2.480 8.347 -1.231 0.912 C24 I8K 38 I8K C25 C32 C 0 1 N N N 10.450 -14.273 -1.973 9.058 -0.289 -0.062 C25 I8K 39 I8K O6 O6 O 0 1 N N N 9.087 -13.745 -0.036 10.241 -0.210 -2.167 O6 I8K 40 I8K C27 C33 C 0 1 N N N 11.481 -13.465 0.123 8.402 -1.765 -1.968 C27 I8K 41 I8K C28 C34 C 0 1 N N N 12.830 -14.034 -0.313 7.690 -2.706 -0.994 C28 I8K 42 I8K C35 C35 C 0 1 N N N 16.209 -11.483 -4.174 2.998 -0.821 0.755 C35 I8K 43 I8K H13 H1 H 0 1 N N N 18.400 -1.297 -4.284 -6.749 1.454 0.605 H13 I8K 44 I8K H14 H2 H 0 1 N N N 21.887 -2.590 -2.492 -9.410 0.046 -2.695 H14 I8K 45 I8K H15 H3 H 0 1 N N N 22.307 -1.562 -0.310 -11.073 -1.558 -1.847 H15 I8K 46 I8K H19 H4 H 0 1 N N N 20.065 1.865 -1.494 -9.166 -1.531 1.967 H19 I8K 47 I8K H10 H5 H 0 1 N N N 19.066 -5.451 -4.531 -5.122 3.318 1.157 H10 I8K 48 I8K H9 H6 H 0 1 N N N 20.167 -4.395 -5.480 -4.241 4.109 -0.176 H9 I8K 49 I8K H6 H7 H 0 1 N N N 15.564 -6.724 -5.766 0.014 2.317 -1.273 H6 I8K 50 I8K H5 H8 H 0 1 N N N 16.063 -8.066 -6.851 0.258 2.597 0.468 H5 I8K 51 I8K H8 H9 H 0 1 N N N 18.288 -7.506 -6.758 -1.625 0.530 -0.755 H8 I8K 52 I8K H7 H10 H 0 1 N N N 18.150 -6.758 -5.130 -1.381 0.810 0.985 H7 I8K 53 I8K H4 H11 H 0 1 N N N 17.106 -9.159 -4.800 0.982 0.203 0.703 H4 I8K 54 I8K H22 H12 H 0 1 N N N 19.858 -2.453 -6.670 -5.656 -0.614 -0.242 H22 I8K 55 I8K H21 H13 H 0 1 N N N 18.680 -1.099 -6.594 -4.860 0.339 -1.518 H21 I8K 56 I8K H24 H14 H 0 1 N N N 16.909 -2.755 -5.949 -3.298 0.053 0.346 H24 I8K 57 I8K H23 H15 H 0 1 N N N 17.591 -3.021 -7.589 -4.508 0.675 1.497 H23 I8K 58 I8K H25 H16 H 0 1 N N N 14.101 -8.781 -4.601 2.549 1.782 -1.395 H25 I8K 59 I8K H26 H17 H 0 1 N N N 15.681 -10.161 -6.794 2.901 3.336 0.268 H26 I8K 60 I8K H27 H18 H 0 1 N N N 14.160 -9.211 -6.893 1.886 2.392 1.395 H27 I8K 61 I8K H28 H19 H 0 1 N N N 12.939 -11.158 -6.667 4.630 2.708 1.729 H28 I8K 62 I8K H29 H20 H 0 1 N N N 14.460 -12.105 -6.538 3.738 1.267 2.316 H29 I8K 63 I8K H32 H21 H 0 1 N N N 11.298 -12.840 -4.581 7.350 1.306 0.929 H32 I8K 64 I8K H39 H22 H 0 1 N N N 10.451 -15.319 -0.111 10.277 -1.850 -0.911 H39 I8K 65 I8K H45 H23 H 0 1 N N N 14.127 -16.008 -1.615 7.154 -3.605 1.523 H45 I8K 66 I8K H46 H24 H 0 1 N N N 14.442 -15.158 -3.166 6.087 -2.273 2.026 H46 I8K 67 I8K H47 H25 H 0 1 N N N 15.170 -14.546 -1.642 5.619 -3.324 0.668 H47 I8K 68 I8K H48 H26 H 0 1 N N N 12.272 -12.188 -2.325 6.725 -0.146 -0.945 H48 I8K 69 I8K H50 H27 H 0 1 N N N 15.260 -12.436 -1.877 5.463 -1.964 -1.958 H50 I8K 70 I8K H49 H28 H 0 1 N N N 14.035 -11.684 -0.799 4.579 -2.238 -0.442 H49 I8K 71 I8K H52 H29 H 0 1 N N N 15.379 -9.994 -2.025 4.457 0.291 -2.156 H52 I8K 72 I8K H51 H30 H 0 1 N N N 13.635 -9.907 -2.446 3.177 -0.943 -2.001 H51 I8K 73 I8K H2 H31 H 0 1 N N N 16.218 -8.473 -2.586 1.454 -1.104 -1.314 H2 I8K 74 I8K H3 H32 H 0 1 N N N 17.225 -7.195 -3.348 -0.257 -0.612 -1.326 H3 I8K 75 I8K H1 H33 H 0 1 N N N 15.434 -7.051 -3.356 0.922 0.244 -2.348 H1 I8K 76 I8K H11 H34 H 0 1 N N N 17.902 -3.428 -3.683 -5.417 2.733 -1.825 H11 I8K 77 I8K H12 H35 H 0 1 N N N 19.640 -3.473 -3.233 -6.618 3.522 -0.774 H12 I8K 78 I8K H17 H36 H 0 1 N N N 22.473 0.857 2.451 -11.436 -4.616 0.740 H17 I8K 79 I8K H18 H37 H 0 1 N N N 21.777 2.934 1.224 -10.658 -2.572 2.514 H18 I8K 80 I8K H20 H38 H 0 1 N N N 19.631 0.844 -3.671 -7.498 0.072 1.127 H20 I8K 81 I8K H30 H39 H 0 1 N N N 12.808 -10.772 -4.383 5.193 1.631 -0.354 H30 I8K 82 I8K H31 H40 H 0 1 N N N 14.268 -13.424 -4.238 5.153 -0.701 1.616 H31 I8K 83 I8K H33 H41 H 0 1 N N N 11.656 -14.180 -6.474 7.058 1.840 3.239 H33 I8K 84 I8K H34 H42 H 0 1 N N N 10.881 -15.182 -4.397 8.668 0.051 2.613 H34 I8K 85 I8K H35 H43 H 0 1 N N N 12.635 -15.558 -4.322 7.325 -1.102 2.804 H35 I8K 86 I8K H36 H44 H 0 1 N N N 11.836 -15.878 -2.160 9.047 -1.992 1.259 H36 I8K 87 I8K H38 H45 H 0 1 N N N 10.338 -13.238 -2.328 9.896 0.191 0.444 H38 I8K 88 I8K H37 H46 H 0 1 N N N 9.637 -14.891 -2.382 8.358 0.470 -0.409 H37 I8K 89 I8K H40 H47 H 0 1 N N N 9.041 -13.757 0.913 10.597 -0.651 -2.952 H40 I8K 90 I8K H41 H48 H 0 1 N N N 11.396 -12.425 -0.226 7.702 -1.005 -2.316 H41 I8K 91 I8K H42 H49 H 0 1 N N N 11.415 -13.490 1.221 8.771 -2.336 -2.820 H42 I8K 92 I8K H44 H50 H 0 1 N N N 12.926 -15.045 0.110 8.389 -3.466 -0.646 H44 I8K 93 I8K H43 H51 H 0 1 N N N 13.620 -13.389 0.098 6.853 -3.187 -1.500 H43 I8K 94 I8K H53 H52 H 0 1 N N N 16.165 -12.399 -3.566 2.148 -1.347 0.322 H53 I8K 95 I8K H54 H53 H 0 1 N N N 16.341 -11.752 -5.232 3.796 -1.533 0.967 H54 I8K 96 I8K H55 H54 H 0 1 N N N 17.056 -10.864 -3.844 2.691 -0.334 1.680 H55 I8K 97 I8K H16 H55 H 0 1 N N N 20.348 0.940 1.253 -12.322 -2.491 0.064 H16 I8K 98 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I8K O1 C5 DOUB N N 1 I8K C5 N1 SING N N 2 I8K C5 C4 SING N N 3 I8K C16 C15 SING N N 4 I8K C16 N1 SING N N 5 I8K C18 C19 SING N N 6 I8K C18 C17 SING N N 7 I8K C15 C8 SING N N 8 I8K C19 C20 SING N N 9 I8K N1 C6 SING N N 10 I8K C4 C3 SING N N 11 I8K O5 C22 SING N N 12 I8K C3 C2 SING N N 13 I8K C6 C7 SING N N 14 I8K C17 C2 SING N N 15 I8K C17 C34 SING N N 16 I8K C2 C1 SING N N 17 I8K C8 O2 SING N N 18 I8K C8 C7 SING N N 19 I8K C22 C21 SING N N 20 I8K C22 C23 SING N N 21 I8K C20 C21 SING N N 22 I8K C20 C34 SING N N 23 I8K O2 C9 SING N N 24 I8K C35 C34 SING N N 25 I8K C21 C31 SING N N 26 I8K C23 C24 SING N N 27 I8K C34 C33 SING N N 28 I8K C9 C14 DOUB Y N 29 I8K C9 C10 SING Y N 30 I8K C14 C13 SING Y N 31 I8K C33 C32 SING N N 32 I8K C31 C29 SING N N 33 I8K C31 C32 SING N N 34 I8K C24 C25 SING N N 35 I8K C24 C29 SING N N 36 I8K C10 C11 DOUB Y N 37 I8K C30 C29 SING N N 38 I8K C25 C26 SING N N 39 I8K C29 C28 SING N N 40 I8K C13 C12 DOUB Y N 41 I8K C11 C12 SING Y N 42 I8K C12 B1 SING N N 43 I8K C26 O6 SING N N 44 I8K C26 C27 SING N N 45 I8K C28 C27 SING N N 46 I8K O4 B1 SING N N 47 I8K B1 O3 SING N N 48 I8K C8 H13 SING N N 49 I8K C10 H14 SING N N 50 I8K C11 H15 SING N N 51 I8K C13 H19 SING N N 52 I8K C6 H10 SING N N 53 I8K C6 H9 SING N N 54 I8K C3 H6 SING N N 55 I8K C3 H5 SING N N 56 I8K C4 H8 SING N N 57 I8K C4 H7 SING N N 58 I8K C2 H4 SING N N 59 I8K C15 H22 SING N N 60 I8K C15 H21 SING N N 61 I8K C16 H24 SING N N 62 I8K C16 H23 SING N N 63 I8K C17 H25 SING N N 64 I8K C18 H26 SING N N 65 I8K C18 H27 SING N N 66 I8K C19 H28 SING N N 67 I8K C19 H29 SING N N 68 I8K C22 H32 SING N N 69 I8K C26 H39 SING N N 70 I8K C30 H45 SING N N 71 I8K C30 H46 SING N N 72 I8K C30 H47 SING N N 73 I8K C31 H48 SING N N 74 I8K C32 H50 SING N N 75 I8K C32 H49 SING N N 76 I8K C33 H52 SING N N 77 I8K C33 H51 SING N N 78 I8K C1 H2 SING N N 79 I8K C1 H3 SING N N 80 I8K C1 H1 SING N N 81 I8K C7 H11 SING N N 82 I8K C7 H12 SING N N 83 I8K O3 H17 SING N N 84 I8K O4 H18 SING N N 85 I8K C14 H20 SING N N 86 I8K C20 H30 SING N N 87 I8K C21 H31 SING N N 88 I8K O5 H33 SING N N 89 I8K C23 H34 SING N N 90 I8K C23 H35 SING N N 91 I8K C24 H36 SING N N 92 I8K C25 H38 SING N N 93 I8K C25 H37 SING N N 94 I8K O6 H40 SING N N 95 I8K C27 H41 SING N N 96 I8K C27 H42 SING N N 97 I8K C28 H44 SING N N 98 I8K C28 H43 SING N N 99 I8K C35 H53 SING N N 100 I8K C35 H54 SING N N 101 I8K C35 H55 SING N N 102 I8K B1 H16 SING N N 103 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I8K InChI InChI 1.06 "InChI=1S/C35H55BNO6/c1-22(4-11-32(40)37-18-14-27(15-19-37)43-26-7-5-24(6-8-26)36(41)42)28-9-10-29-33-30(13-17-35(28,29)3)34(2)16-12-25(38)20-23(34)21-31(33)39/h5-8,22-23,25,27-31,33,36,38-39,41-42H,4,9-21H2,1-3H3/t22-,23+,25-,28-,29+,30+,31+,33+,34+,35-/m1/s1" I8K InChIKey InChI 1.06 PHWWHXAZUYBGQF-KSZJEZMCSA-N I8K SMILES_CANONICAL CACTVS 3.385 "C[C@H](CCC(=O)N1CCC(CC1)Oc2ccc(cc2)[BH](O)O)[C@H]3CC[C@H]4[C@@H]5[C@@H](O)C[C@@H]6C[C@H](O)CC[C@]6(C)[C@H]5CC[C@]34C" I8K SMILES CACTVS 3.385 "C[CH](CCC(=O)N1CCC(CC1)Oc2ccc(cc2)[BH](O)O)[CH]3CC[CH]4[CH]5[CH](O)C[CH]6C[CH](O)CC[C]6(C)[CH]5CC[C]34C" I8K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[BH](c1ccc(cc1)OC2CCN(CC2)C(=O)CC[C@@H](C)[C@H]3CC[C@@H]4[C@@]3(CC[C@H]5[C@H]4[C@H](C[C@H]6[C@@]5(CC[C@H](C6)O)C)O)C)(O)O" I8K SMILES "OpenEye OEToolkits" 2.0.7 "[BH](c1ccc(cc1)OC2CCN(CC2)C(=O)CCC(C)C3CCC4C3(CCC5C4C(CC6C5(CCC(C6)O)C)O)C)(O)O" # _pdbx_chem_comp_identifier.comp_id I8K _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[4-[1-[(4~{R})-4-[(3~{R},5~{S},7~{S},8~{R},9~{S},10~{S},13~{R},14~{S},17~{R})-10,13-dimethyl-3,7-bis(oxidanyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]pentanoyl]piperidin-4-yl]oxyphenyl]-bis(oxidanyl)-$l^{4}-borane" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I8K "Create component" 2022-02-24 PDBE I8K "Initial release" 2022-05-04 RCSB I8K "Modify descriptor" 2022-08-22 RCSB #