data_I8P # _chem_comp.id I8P _chem_comp.name "(1R,3S,4R,5S,6R)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl bis[trihydrogen (diphosphate)]" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H20 O30 P8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "1D-myo-inositol 1,5-bisdiphosphate 2,3,4,6-tetrakisphosphate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-08-08 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 819.995 _chem_comp.one_letter_code ? _chem_comp.three_letter_code I8P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3T9F _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal I8P C1 C1 C 0 1 N N R 0.833 18.486 9.928 1.322 -0.306 0.491 C1 I8P 1 I8P C2 C2 C 0 1 N N R -0.628 18.953 9.786 1.147 -1.774 0.099 C2 I8P 2 I8P C3 C3 C 0 1 N N N -1.329 18.872 11.158 -0.201 -2.282 0.613 C3 I8P 3 I8P C4 C4 C 0 1 N N R -0.648 19.783 12.168 -1.328 -1.452 -0.005 C4 I8P 4 I8P C5 C5 C 0 1 N N S 0.847 19.468 12.281 -1.153 0.016 0.387 C5 I8P 5 I8P C6 C6 C 0 1 N N N 1.595 19.358 10.937 0.195 0.525 -0.127 C6 I8P 6 I8P O11 O11 O 0 1 N N N 1.482 18.491 8.655 2.582 0.169 0.011 O11 I8P 7 I8P O12 O12 O 0 1 N N N -0.671 20.303 9.285 1.191 -1.896 -1.324 O12 I8P 8 I8P O13 O13 O 0 1 N N N -2.711 19.232 11.046 -0.364 -3.654 0.247 O13 I8P 9 I8P O14 O14 O 0 1 N N N -1.250 19.553 13.428 -2.588 -1.927 0.475 O14 I8P 10 I8P O15 O15 O 0 1 N N N 1.460 20.513 13.011 -2.206 0.792 -0.191 O15 I8P 11 I8P O16 O16 O 0 1 N N N 2.833 18.753 11.250 0.358 1.896 0.239 O16 I8P 12 I8P O21 O21 O 0 1 N N N 0.176 17.467 6.749 3.178 1.835 1.811 O21 I8P 13 I8P O22 O22 O 0 1 N N N -0.505 21.843 7.235 3.753 -2.163 -1.855 O22 I8P 14 I8P O23 O23 O 0 1 N N N -3.702 17.624 12.731 0.770 -4.972 2.219 O23 I8P 15 I8P O24 O24 O 0 1 N N N -3.779 20.065 13.717 -5.059 -2.817 0.365 O24 I8P 16 I8P O25 O25 O 0 1 N N N 1.791 18.976 15.047 -2.503 2.575 1.571 O25 I8P 17 I8P O26 O26 O 0 1 N N N 5.386 18.853 11.763 -0.776 3.215 -1.733 O26 I8P 18 I8P O31 O31 O 0 1 N N N 2.693 17.122 6.939 4.262 -0.440 1.939 O31 I8P 19 I8P O32 O32 O 0 1 N N N -1.273 19.431 6.894 2.252 -4.173 -1.572 O32 I8P 20 I8P O33 O33 O 0 1 N N N -3.284 16.858 10.309 -1.712 -4.510 2.202 O33 I8P 21 I8P O34 O34 O 0 1 N N N -2.167 21.979 13.438 -4.055 -1.490 -1.532 O34 I8P 22 I8P O35 O35 O 0 1 N N N 0.967 21.406 15.258 -4.140 0.653 1.585 O35 I8P 23 I8P O36 O36 O 0 1 N N N 4.113 20.975 10.937 0.839 4.462 -0.075 O36 I8P 24 I8P O41 O41 O 0 1 N N N 1.003 15.942 8.508 4.952 1.303 0.097 O41 I8P 25 I8P O42 O42 O 0 1 N N N -2.813 21.102 8.025 1.960 -2.800 -3.670 O42 I8P 26 I8P O43 O43 O 0 1 N N N -5.216 18.562 10.784 -0.845 -6.220 0.561 O43 I8P 27 I8P O44 O44 O 0 1 N N N -2.094 20.579 15.636 -3.219 -3.849 -1.204 O44 I8P 28 I8P O45 O45 O 0 1 N N N 3.338 20.838 14.505 -4.207 2.495 -0.290 O45 I8P 29 I8P O46 O46 O 0 1 N N N 4.460 18.936 9.316 1.706 2.752 -1.717 O46 I8P 30 I8P O51 O51 O 0 1 N N N 0.507 13.535 8.617 5.728 3.776 0.540 O51 I8P 31 I8P O55 O55 O 0 1 N N N 3.260 23.433 14.632 -5.819 3.723 1.214 O55 I8P 32 I8P O61 O61 O 0 1 N N N 3.042 14.070 7.987 6.851 1.821 1.677 O61 I8P 33 I8P O65 O65 O 0 1 N N N 5.500 22.043 15.093 -4.219 5.120 -0.149 O65 I8P 34 I8P O71 O71 O 0 1 N N N 2.169 14.497 10.388 7.286 2.127 -0.791 O71 I8P 35 I8P O75 O75 O 0 1 N N N 3.598 22.009 16.818 -6.231 3.854 -1.272 O75 I8P 36 I8P PA1 PA1 P 0 1 N N N 1.383 17.247 7.593 3.731 0.741 0.983 PA1 I8P 37 I8P PA2 PA2 P 0 1 N N N -1.320 20.604 7.797 2.288 -2.789 -2.094 PA2 I8P 38 I8P PA3 PA3 P 0 1 N N N -3.846 18.064 11.193 -0.563 -4.832 1.326 PA3 I8P 39 I8P PA4 PA4 P 0 1 N N N -2.307 20.571 14.156 -3.737 -2.498 -0.497 PA4 I8P 40 I8P PA5 PA5 P 0 1 N N N 1.809 20.379 14.576 -3.248 1.649 0.688 PA5 I8P 41 I8P PA6 PA6 P 0 1 N N N 4.244 19.354 10.729 0.557 3.074 -0.841 PA6 I8P 42 I8P PB1 PB1 P 0 1 N N N 1.769 14.517 8.947 6.218 2.247 0.408 PB1 I8P 43 I8P PB5 PB5 P 0 1 N N N 3.885 22.088 15.354 -5.134 3.796 -0.095 PB5 I8P 44 I8P H1 H1 H 0 1 N N N 0.831 17.455 10.312 1.288 -0.213 1.577 H1 I8P 45 I8P H2 H2 H 0 1 N N N -1.151 18.299 9.073 1.950 -2.366 0.540 H2 I8P 46 I8P H3 H3 H 0 1 N N N -1.257 17.832 11.508 -0.235 -2.189 1.698 H3 I8P 47 I8P H4 H4 H 0 1 N N N -0.759 20.828 11.844 -1.294 -1.545 -1.091 H4 I8P 48 I8P H5 H5 H 0 1 N N N 0.912 18.483 12.765 -1.187 0.109 1.472 H5 I8P 49 I8P H6 H6 H 0 1 N N N 1.707 20.348 10.470 0.229 0.432 -1.213 H6 I8P 50 I8P HO22 HO22 H 0 0 N N N -0.118 21.615 6.398 3.849 -1.255 -2.174 HO22 I8P 51 I8P HO23 HO23 H 0 0 N N N -3.320 16.756 12.778 1.564 -5.183 1.709 HO23 I8P 52 I8P HO24 HO24 H 0 0 N N N -4.184 20.716 13.155 -5.794 -3.166 -0.157 HO24 I8P 53 I8P HO26 HO26 H 0 0 N N N 6.042 18.352 11.293 -1.570 3.426 -1.224 HO26 I8P 54 I8P HO31 HO31 H 0 0 N N N 2.587 17.204 5.999 4.639 -1.193 1.463 HO31 I8P 55 I8P HO35 HO35 H 0 0 N N N 0.484 21.000 15.968 -4.656 0.016 1.071 HO35 I8P 56 I8P HO36 HO36 H 0 0 N N N 4.198 21.410 10.097 0.969 5.217 -0.664 HO36 I8P 57 I8P HO42 HO42 H 0 0 N N N -3.410 20.549 7.534 2.582 -3.320 -4.198 HO42 I8P 58 I8P HO43 HO43 H 0 0 N N N -5.528 18.058 10.042 -0.975 -6.975 1.150 HO43 I8P 59 I8P HO44 HO44 H 0 0 N N N -1.900 21.463 15.924 -2.992 -4.555 -0.585 HO44 I8P 60 I8P HO51 HO51 H 0 0 N N N 0.758 12.911 7.946 5.303 4.122 -0.257 HO51 I8P 61 I8P HO65 HO65 H 0 0 N N N 5.759 22.798 14.578 -3.740 5.233 -0.981 HO65 I8P 62 I8P HO71 HO71 H 0 0 N N N 3.078 14.230 10.461 8.076 2.670 -0.670 HO71 I8P 63 I8P HO75 HO75 H 0 0 N N N 3.092 22.768 17.083 -6.826 4.614 -1.219 HO75 I8P 64 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal I8P O11 C1 SING N N 1 I8P C2 C1 SING N N 2 I8P C1 C6 SING N N 3 I8P C1 H1 SING N N 4 I8P O12 C2 SING N N 5 I8P C2 C3 SING N N 6 I8P C2 H2 SING N N 7 I8P O13 C3 SING N N 8 I8P C3 C4 SING N N 9 I8P C3 H3 SING N N 10 I8P C4 C5 SING N N 11 I8P C4 O14 SING N N 12 I8P C4 H4 SING N N 13 I8P C6 C5 SING N N 14 I8P C5 O15 SING N N 15 I8P C5 H5 SING N N 16 I8P C6 O16 SING N N 17 I8P C6 H6 SING N N 18 I8P PA1 O11 SING N N 19 I8P PA2 O12 SING N N 20 I8P O13 PA3 SING N N 21 I8P O14 PA4 SING N N 22 I8P O15 PA5 SING N N 23 I8P PA6 O16 SING N N 24 I8P O21 PA1 DOUB N N 25 I8P O22 PA2 SING N N 26 I8P O22 HO22 SING N N 27 I8P PA3 O23 SING N N 28 I8P O23 HO23 SING N N 29 I8P O24 PA4 SING N N 30 I8P O24 HO24 SING N N 31 I8P PA5 O25 DOUB N N 32 I8P PA6 O26 SING N N 33 I8P O26 HO26 SING N N 34 I8P O31 PA1 SING N N 35 I8P O31 HO31 SING N N 36 I8P O32 PA2 DOUB N N 37 I8P O33 PA3 DOUB N N 38 I8P O34 PA4 DOUB N N 39 I8P PA5 O35 SING N N 40 I8P O35 HO35 SING N N 41 I8P PA6 O36 SING N N 42 I8P O36 HO36 SING N N 43 I8P PA1 O41 SING N N 44 I8P O41 PB1 SING N N 45 I8P PA2 O42 SING N N 46 I8P O42 HO42 SING N N 47 I8P O43 PA3 SING N N 48 I8P O43 HO43 SING N N 49 I8P PA4 O44 SING N N 50 I8P O44 HO44 SING N N 51 I8P O45 PA5 SING N N 52 I8P O45 PB5 SING N N 53 I8P O46 PA6 DOUB N N 54 I8P O51 PB1 SING N N 55 I8P O51 HO51 SING N N 56 I8P O55 PB5 DOUB N N 57 I8P O61 PB1 DOUB N N 58 I8P O65 PB5 SING N N 59 I8P O65 HO65 SING N N 60 I8P PB1 O71 SING N N 61 I8P O71 HO71 SING N N 62 I8P PB5 O75 SING N N 63 I8P O75 HO75 SING N N 64 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor I8P SMILES ACDLabs 12.01 "O=P(O)(O)OC1C(OP(=O)(O)O)C(OP(=O)(O)O)C(OP(=O)(O)OP(=O)(O)O)C(OP(=O)(O)O)C1OP(=O)(OP(=O)(O)O)O" I8P InChI InChI 1.03 "InChI=1S/C6H20O30P8/c7-37(8,9)29-1-2(30-38(10,11)12)5(33-43(25,26)35-41(19,20)21)4(32-40(16,17)18)6(3(1)31-39(13,14)15)34-44(27,28)36-42(22,23)24/h1-6H,(H,25,26)(H,27,28)(H2,7,8,9)(H2,10,11,12)(H2,13,14,15)(H2,16,17,18)(H2,19,20,21)(H2,22,23,24)/t1-,2-,3-,4-,5+,6-/m1/s1" I8P InChIKey InChI 1.03 HHQOOERQSFJGEP-SLWYWOEDSA-N I8P SMILES_CANONICAL CACTVS 3.370 "O[P](O)(=O)O[C@H]1[C@@H](O[P](O)(O)=O)[C@@H](O[P](O)(=O)O[P](O)(O)=O)[C@H](O[P](O)(O)=O)[C@@H](O[P](O)(=O)O[P](O)(O)=O)[C@@H]1O[P](O)(O)=O" I8P SMILES CACTVS 3.370 "O[P](O)(=O)O[CH]1[CH](O[P](O)(O)=O)[CH](O[P](O)(=O)O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH](O[P](O)(=O)O[P](O)(O)=O)[CH]1O[P](O)(O)=O" I8P SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "[C@@H]1([C@H](C([C@H]([C@@H](C1OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)OP(=O)(O)O)OP(=O)(O)O" I8P SMILES "OpenEye OEToolkits" 1.7.2 "C1(C(C(C(C(C1OP(=O)(O)O)OP(=O)(O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier I8P "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,3S,4R,5S,6R)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl bis[trihydrogen (diphosphate)]" I8P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "[(1R,3S,4R,6R)-3-[oxidanyl(phosphonooxy)phosphoryl]oxy-2,4,5,6-tetraphosphonooxy-cyclohexyl] phosphono hydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site I8P "Create component" 2011-08-08 RCSB I8P "Modify synonyms" 2011-08-09 RCSB I8P "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id I8P _pdbx_chem_comp_synonyms.name "1D-myo-inositol 1,5-bisdiphosphate 2,3,4,6-tetrakisphosphate" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##