data_I9F
#
_chem_comp.id I9F
_chem_comp.name "dimethyl (2R)-2-hydroxy-2-{2-[4-(3-hydroxy-9,10-dioxo-9,10-dihydroanthracene-2-sulfonyl)piperazin-1-yl]-2-oxoethyl}butanedioate"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C26 H26 N2 O11 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-01-24
_chem_comp.pdbx_modified_date 2022-03-11
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 574.556
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code I9F
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5SCI
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
I9F C10 C1 C 0 1 Y N N 21.691 -67.374 53.453 3.757 -0.901 0.892 C10 I9F 1
I9F C11 C2 C 0 1 Y N N 21.970 -66.181 52.810 2.896 -1.505 -0.002 C11 I9F 2
I9F C13 C3 C 0 1 N N N 19.974 -61.948 54.355 -1.910 -2.676 -0.731 C13 I9F 3
I9F C14 C4 C 0 1 N N N 19.829 -61.847 56.808 -3.737 -1.201 -0.040 C14 I9F 4
I9F C17 C5 C 0 1 N N N 20.976 -61.375 59.780 -5.481 0.872 -0.939 C17 I9F 5
I9F C21 C6 C 0 1 N N N 16.662 -60.129 62.448 -9.571 3.125 0.910 C21 I9F 6
I9F O9 O1 O 0 1 N N N 19.500 -66.109 52.055 1.719 -3.765 -0.212 O9 I9F 7
I9F S S1 S 0 1 N N N 20.592 -65.210 52.251 1.642 -2.593 0.588 S I9F 8
I9F O8 O2 O 0 1 N N N 21.045 -64.396 51.167 1.759 -2.610 2.004 O8 I9F 9
I9F C9 C7 C 0 1 Y N N 22.709 -68.244 53.819 4.747 -0.035 0.430 C9 I9F 10
I9F C7 C8 C 0 1 N N N 22.381 -69.491 54.546 5.670 0.613 1.382 C7 I9F 11
I9F O1 O3 O 0 1 N N N 21.215 -69.841 54.707 5.569 0.391 2.572 O1 I9F 12
I9F C6 C9 C 0 1 Y N N 23.504 -70.329 55.030 6.717 1.531 0.886 C6 I9F 13
I9F C5 C10 C 0 1 Y N N 23.233 -71.446 55.822 7.590 2.146 1.778 C5 I9F 14
I9F C4 C11 C 0 1 Y N N 24.274 -72.185 56.357 8.568 3.004 1.306 C4 I9F 15
I9F C3 C12 C 0 1 Y N N 25.579 -71.828 56.110 8.683 3.257 -0.049 C3 I9F 16
I9F C2 C13 C 0 1 Y N N 25.871 -70.735 55.310 7.823 2.654 -0.950 C2 I9F 17
I9F C1 C14 C 0 1 Y N N 24.838 -69.974 54.764 6.834 1.787 -0.492 C1 I9F 18
I9F C24 C15 C 0 1 Y N N 23.293 -65.816 52.531 3.011 -1.259 -1.364 C24 I9F 19
I9F O10 O4 O 0 1 N N N 23.604 -64.624 51.949 2.158 -1.857 -2.234 O10 I9F 20
I9F C25 C16 C 0 1 Y N N 24.316 -66.682 52.891 3.997 -0.401 -1.841 C25 I9F 21
I9F C8 C17 C 0 1 Y N N 24.041 -67.894 53.538 4.863 0.221 -0.950 C8 I9F 22
I9F C C18 C 0 1 N N N 25.164 -68.757 53.979 5.911 1.138 -1.446 C I9F 23
I9F O O5 O 0 1 N N N 26.325 -68.477 53.702 6.012 1.360 -2.637 O I9F 24
I9F N N1 N 0 1 N N N 20.150 -64.195 53.451 0.182 -1.890 0.248 N I9F 25
I9F C23 C19 C 0 1 N N N 19.772 -64.783 54.748 -0.457 -0.987 1.216 C23 I9F 26
I9F C22 C20 C 0 1 N N N 18.889 -63.799 55.495 -1.869 -1.506 1.512 C22 I9F 27
I9F N1 N2 N 0 1 N N N 19.576 -62.507 55.652 -2.549 -1.773 0.237 N1 I9F 28
I9F C12 C21 C 0 1 N N N 20.871 -62.920 53.616 -0.498 -2.157 -1.028 C12 I9F 29
I9F O7 O6 O 0 1 N N N 20.410 -60.770 56.820 -4.289 -1.429 -1.095 O7 I9F 30
I9F C15 C22 C 0 1 N N N 19.379 -62.464 58.117 -4.380 -0.277 0.962 C15 I9F 31
I9F C16 C23 C 0 1 N N R 19.512 -61.630 59.405 -5.711 0.233 0.406 C16 I9F 32
I9F O2 O7 O 0 1 N N N 18.887 -60.357 59.206 -6.618 -0.862 0.264 O2 I9F 33
I9F O4 O8 O 0 1 N N N 21.904 -61.922 59.252 -6.037 0.435 -1.919 O4 I9F 34
I9F O3 O9 O 0 1 N N N 21.081 -60.504 60.784 -4.658 1.927 -1.049 O3 I9F 35
I9F C18 C24 C 0 1 N N N 22.416 -60.268 61.293 -4.483 2.492 -2.375 C18 I9F 36
I9F C19 C25 C 0 1 N N N 18.854 -62.425 60.548 -6.303 1.266 1.366 C19 I9F 37
I9F C20 C26 C 0 1 N N N 17.572 -61.853 61.090 -7.614 1.768 0.818 C20 I9F 38
I9F O6 O10 O 0 1 N N N 16.470 -62.264 60.833 -8.031 1.343 -0.233 O6 I9F 39
I9F O5 O11 O 0 1 N N N 17.814 -60.804 61.884 -8.318 2.687 1.498 O5 I9F 40
I9F H4 H1 H 0 1 N N N 20.666 -67.632 53.673 3.662 -1.097 1.950 H4 I9F 41
I9F H7 H2 H 0 1 N N N 20.517 -61.005 54.517 -1.850 -3.680 -0.310 H7 I9F 42
I9F H8 H3 H 0 1 N N N 19.075 -61.754 53.752 -2.495 -2.699 -1.650 H8 I9F 43
I9F H18 H4 H 0 1 N N N 16.999 -59.291 63.076 -10.238 2.270 0.797 H18 I9F 44
I9F H19 H5 H 0 1 N N N 16.027 -59.746 61.635 -10.038 3.866 1.558 H19 I9F 45
I9F H17 H6 H 0 1 N N N 16.085 -60.838 63.060 -9.379 3.567 -0.068 H17 I9F 46
I9F H3 H7 H 0 1 N N N 22.211 -71.734 56.017 7.505 1.953 2.837 H3 I9F 47
I9F H2 H8 H 0 1 N N N 24.060 -73.047 56.972 9.244 3.480 2.000 H2 I9F 48
I9F H1 H9 H 0 1 N N N 26.383 -72.404 56.543 9.449 3.929 -0.406 H1 I9F 49
I9F H H10 H 0 1 N N N 26.899 -70.472 55.109 7.918 2.856 -2.007 H I9F 50
I9F H24 H11 H 0 1 N N N 22.827 -64.256 51.546 1.355 -1.349 -2.410 H24 I9F 51
I9F H25 H12 H 0 1 N N N 25.339 -66.418 52.669 4.084 -0.212 -2.901 H25 I9F 52
I9F H22 H13 H 0 1 N N N 20.677 -64.989 55.338 0.126 -0.966 2.136 H22 I9F 53
I9F H23 H14 H 0 1 N N N 19.222 -65.721 54.582 -0.514 0.018 0.796 H23 I9F 54
I9F H20 H15 H 0 1 N N N 18.653 -64.207 56.489 -1.806 -2.427 2.093 H20 I9F 55
I9F H21 H16 H 0 1 N N N 17.957 -63.647 54.930 -2.424 -0.756 2.076 H21 I9F 56
I9F H5 H17 H 0 1 N N N 21.792 -63.087 54.194 0.058 -2.908 -1.588 H5 I9F 57
I9F H6 H18 H 0 1 N N N 21.128 -62.509 52.628 -0.561 -1.236 -1.608 H6 I9F 58
I9F H9 H19 H 0 1 N N N 18.316 -62.723 58.006 -4.558 -0.817 1.892 H9 I9F 59
I9F H10 H20 H 0 1 N N N 19.967 -63.382 58.262 -3.719 0.568 1.154 H10 I9F 60
I9F H11 H21 H 0 1 N N N 19.142 -60.007 58.360 -6.813 -1.321 1.092 H11 I9F 61
I9F H12 H22 H 0 1 N N N 22.372 -59.536 62.113 -3.795 3.336 -2.323 H12 I9F 62
I9F H13 H23 H 0 1 N N N 22.838 -61.212 61.667 -4.076 1.732 -3.043 H13 I9F 63
I9F H14 H24 H 0 1 N N N 23.052 -59.876 60.486 -5.447 2.831 -2.755 H14 I9F 64
I9F H15 H25 H 0 1 N N N 18.641 -63.438 60.176 -6.470 0.803 2.339 H15 I9F 65
I9F H16 H26 H 0 1 N N N 19.575 -62.483 61.377 -5.611 2.101 1.475 H16 I9F 66
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
I9F O C DOUB N N 1
I9F C C1 SING N N 2
I9F C1 C2 SING Y N 3
I9F C2 C3 DOUB Y N 4
I9F C3 C4 SING Y N 5
I9F C4 C5 DOUB Y N 6
I9F C1 C6 DOUB Y N 7
I9F C5 C6 SING Y N 8
I9F C6 C7 SING N N 9
I9F O1 C7 DOUB N N 10
I9F C C8 SING N N 11
I9F C8 C9 DOUB Y N 12
I9F C7 C9 SING N N 13
I9F C9 C10 SING Y N 14
I9F C10 C11 DOUB Y N 15
I9F C11 S SING N N 16
I9F N S SING N N 17
I9F N C12 SING N N 18
I9F C12 C13 SING N N 19
I9F C13 N1 SING N N 20
I9F C14 N1 SING N N 21
I9F C15 C14 SING N N 22
I9F C16 C15 SING N N 23
I9F O2 C16 SING N N 24
I9F C17 C16 SING N N 25
I9F O3 C17 SING N N 26
I9F C18 O3 SING N N 27
I9F O4 C17 DOUB N N 28
I9F C19 C16 SING N N 29
I9F C20 C19 SING N N 30
I9F O5 C20 SING N N 31
I9F C21 O5 SING N N 32
I9F O6 C20 DOUB N N 33
I9F O7 C14 DOUB N N 34
I9F N1 C22 SING N N 35
I9F C22 C23 SING N N 36
I9F C23 N SING N N 37
I9F O8 S DOUB N N 38
I9F S O9 DOUB N N 39
I9F C24 C11 SING Y N 40
I9F O10 C24 SING N N 41
I9F C25 C24 DOUB Y N 42
I9F C8 C25 SING Y N 43
I9F C10 H4 SING N N 44
I9F C13 H7 SING N N 45
I9F C13 H8 SING N N 46
I9F C21 H18 SING N N 47
I9F C21 H19 SING N N 48
I9F C21 H17 SING N N 49
I9F C5 H3 SING N N 50
I9F C4 H2 SING N N 51
I9F C3 H1 SING N N 52
I9F C2 H SING N N 53
I9F O10 H24 SING N N 54
I9F C25 H25 SING N N 55
I9F C23 H22 SING N N 56
I9F C23 H23 SING N N 57
I9F C22 H20 SING N N 58
I9F C22 H21 SING N N 59
I9F C12 H5 SING N N 60
I9F C12 H6 SING N N 61
I9F C15 H9 SING N N 62
I9F C15 H10 SING N N 63
I9F O2 H11 SING N N 64
I9F C18 H12 SING N N 65
I9F C18 H13 SING N N 66
I9F C18 H14 SING N N 67
I9F C19 H15 SING N N 68
I9F C19 H16 SING N N 69
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
I9F SMILES ACDLabs 12.01 "O=S(=O)(c1cc2C(=O)c3ccccc3C(=O)c2cc1O)N1CCN(CC1)C(=O)CC(O)(CC(=O)OC)C(=O)OC"
I9F InChI InChI 1.03 "InChI=1S/C26H26N2O11S/c1-38-22(31)14-26(35,25(34)39-2)13-21(30)27-7-9-28(10-8-27)40(36,37)20-12-18-17(11-19(20)29)23(32)15-5-3-4-6-16(15)24(18)33/h3-6,11-12,29,35H,7-10,13-14H2,1-2H3/t26-/m1/s1"
I9F InChIKey InChI 1.03 RCVSIAGVCLZIRH-AREMUKBSSA-N
I9F SMILES_CANONICAL CACTVS 3.385 "COC(=O)C[C@](O)(CC(=O)N1CCN(CC1)[S](=O)(=O)c2cc3C(=O)c4ccccc4C(=O)c3cc2O)C(=O)OC"
I9F SMILES CACTVS 3.385 "COC(=O)C[C](O)(CC(=O)N1CCN(CC1)[S](=O)(=O)c2cc3C(=O)c4ccccc4C(=O)c3cc2O)C(=O)OC"
I9F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COC(=O)C[C@](CC(=O)N1CCN(CC1)S(=O)(=O)c2cc3c(cc2O)C(=O)c4ccccc4C3=O)(C(=O)OC)O"
I9F SMILES "OpenEye OEToolkits" 2.0.7 "COC(=O)CC(CC(=O)N1CCN(CC1)S(=O)(=O)c2cc3c(cc2O)C(=O)c4ccccc4C3=O)(C(=O)OC)O"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
I9F "SYSTEMATIC NAME" ACDLabs 12.01 "dimethyl (2R)-2-hydroxy-2-{2-[4-(3-hydroxy-9,10-dioxo-9,10-dihydroanthracene-2-sulfonyl)piperazin-1-yl]-2-oxoethyl}butanedioate"
I9F "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "dimethyl (2~{R})-2-oxidanyl-2-[2-[4-[3-oxidanyl-9,10-bis(oxidanylidene)anthracen-2-yl]sulfonylpiperazin-1-yl]-2-oxidanylidene-ethyl]butanedioate"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
I9F "Create component" 2022-01-24 RCSB
I9F "Initial release" 2022-03-16 RCSB
##