data_IBB # _chem_comp.id IBB _chem_comp.name "5-(2-IMIDAZOLINYL)-2-[2-(4-HYDROXYPHENYL)-5-BENZIMIDAZOLYL]BENZIMIDAZOLE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAD _chem_comp.formula "C23 H20 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 396.445 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IBB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 109D _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IBB C1 C1 C 0 1 N N N 10.536 25.506 3.215 0.119 -0.065 -7.328 C1 IBB 1 IBB C2 C2 C 0 1 N N N 12.264 25.260 1.620 -1.485 1.108 -8.632 C2 IBB 2 IBB C3 C3 C 0 1 N N N 11.463 26.547 1.328 -0.119 1.837 -8.681 C3 IBB 3 IBB C4 C4 C 0 1 Y N N 9.662 25.203 4.345 -0.086 -0.421 -5.879 C4 IBB 4 IBB C5 C5 C 0 1 Y N N 8.397 25.821 4.408 -1.046 -1.361 -5.530 C5 IBB 5 IBB C6 C6 C 0 1 Y N N 7.518 25.516 5.476 -1.248 -1.698 -4.211 C6 IBB 6 IBB C7 C7 C 0 1 Y N N 7.868 24.615 6.499 -0.479 -1.089 -3.213 C7 IBB 7 IBB C8 C8 C 0 1 Y N N 9.143 24.038 6.403 0.491 -0.137 -3.573 C8 IBB 8 IBB C9 C9 C 0 1 Y N N 10.033 24.305 5.364 0.679 0.189 -4.908 C9 IBB 9 IBB C10 C10 C 0 1 Y N N 8.097 23.364 8.126 0.469 -0.404 -1.375 C10 IBB 10 IBB C11 C11 C 0 1 Y N N 8.686 21.360 11.165 0.086 -0.128 2.348 C11 IBB 11 IBB C12 C12 C 0 1 Y N N 7.399 21.285 11.734 1.429 0.011 2.748 C12 IBB 12 IBB C13 C13 C 0 1 Y N N 6.332 21.895 11.057 2.443 0.012 1.781 C13 IBB 13 IBB C14 C14 C 0 1 Y N N 6.567 22.587 9.852 2.128 -0.121 0.462 C14 IBB 14 IBB C15 C15 C 0 1 Y N N 8.743 20.267 12.994 0.209 0.062 4.549 C15 IBB 15 IBB C16 C16 C 0 1 Y N N 9.191 19.492 14.155 -0.171 0.150 5.974 C16 IBB 16 IBB C17 C17 C 0 1 Y N N 10.514 19.485 14.521 0.604 -0.484 6.947 C17 IBB 17 IBB C18 C18 C 0 1 Y N N 10.862 18.842 15.702 0.245 -0.400 8.274 C18 IBB 18 IBB C19 C19 C 0 1 Y N N 9.898 18.224 16.493 -0.885 0.314 8.646 C19 IBB 19 IBB C20 C20 C 0 1 Y N N 8.578 18.167 16.088 -1.663 0.943 7.682 C20 IBB 20 IBB C21 C21 C 0 1 Y N N 8.229 18.809 14.904 -1.308 0.867 6.352 C21 IBB 21 IBB C22 C22 C 0 1 Y N N 7.862 22.646 9.334 0.794 -0.260 0.058 C22 IBB 22 IBB C23 C23 C 0 1 Y N N 8.933 22.017 9.970 -0.226 -0.264 1.007 C23 IBB 23 IBB N1 N1 N 0 1 N N N 11.681 24.810 2.874 -1.149 -0.219 -8.065 N1 IBB 24 IBB N2 N2 N 0 1 N N N 10.360 26.516 2.293 0.541 1.347 -7.442 N2 IBB 25 IBB N3 N3 N 0 1 Y N N 9.289 23.227 7.478 1.076 0.280 -2.393 N3 IBB 26 IBB N4 N4 N 0 1 Y N N 7.213 24.157 7.609 -0.441 -1.211 -1.864 N4 IBB 27 IBB N5 N5 N 0 1 Y N N 7.472 20.586 12.887 1.436 0.128 4.091 N5 IBB 28 IBB N6 N6 N 0 1 Y N N 9.567 20.704 11.978 -0.665 -0.092 3.508 N6 IBB 29 IBB O1 O1 O 0 1 N N N 10.260 17.715 17.709 -1.235 0.395 9.956 O1 IBB 30 IBB H1 H1 H 0 1 N N N 9.889 25.368 4.112 0.879 -0.714 -7.763 H1 IBB 31 IBB H21A 1H2 H 0 0 N N N 12.255 24.504 0.799 -1.901 1.003 -9.634 H21A IBB 32 IBB H22 2H2 H 0 1 N N N 13.371 25.388 1.635 -2.180 1.638 -7.980 H22 IBB 33 IBB H31 1H3 H 0 1 N N N 12.071 27.480 1.361 0.445 1.543 -9.565 H31 IBB 34 IBB H32 2H3 H 0 1 N N N 11.137 26.650 0.266 -0.255 2.918 -8.647 H32 IBB 35 IBB H5 H5 H 0 1 N N N 8.096 26.538 3.626 -1.639 -1.832 -6.299 H5 IBB 36 IBB H6 H6 H 0 1 N N N 6.526 25.997 5.512 -1.997 -2.430 -3.947 H6 IBB 37 IBB H9 H9 H 0 1 N N N 11.019 23.811 5.348 1.423 0.920 -5.187 H9 IBB 38 IBB H13 H13 H 0 1 N N N 5.311 21.830 11.470 3.475 0.118 2.081 H13 IBB 39 IBB H14 H14 H 0 1 N N N 5.739 23.081 9.315 2.914 -0.119 -0.278 H14 IBB 40 IBB H17 H17 H 0 1 N N N 11.270 19.978 13.888 1.484 -1.040 6.658 H17 IBB 41 IBB H18 H18 H 0 1 N N N 11.919 18.821 16.016 0.845 -0.890 9.027 H18 IBB 42 IBB H20 H20 H 0 1 N N N 7.827 17.627 16.689 -2.542 1.497 7.975 H20 IBB 43 IBB H21 H21 H 0 1 N N N 7.182 18.776 14.556 -1.910 1.360 5.603 H21 IBB 44 IBB H23 H23 H 0 1 N N N 9.948 22.038 9.539 -1.255 -0.372 0.697 H23 IBB 45 IBB HN1 HN1 H 0 1 N N N 11.505 23.805 2.854 -1.859 -0.430 -7.380 HN1 IBB 46 IBB HN2 HN2 H 0 1 N N N 10.232 27.420 2.746 1.533 1.339 -7.626 HN2 IBB 47 IBB HN3 HN3 H 0 1 N N N 10.094 22.656 7.735 1.785 0.936 -2.303 HN3 IBB 48 IBB HN6 HN6 H 0 1 N N N 10.571 20.575 11.858 -1.630 -0.164 3.572 HN6 IBB 49 IBB HO1 HO1 H 0 1 N N N 9.602 17.293 18.248 -0.794 1.177 10.316 HO1 IBB 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IBB C1 C4 SING N N 1 IBB C1 N1 SING N N 2 IBB C1 N2 SING N N 3 IBB C1 H1 SING N N 4 IBB C2 C3 SING N N 5 IBB C2 N1 SING N N 6 IBB C2 H21A SING N N 7 IBB C2 H22 SING N N 8 IBB C3 N2 SING N N 9 IBB C3 H31 SING N N 10 IBB C3 H32 SING N N 11 IBB C4 C5 SING Y N 12 IBB C4 C9 DOUB Y N 13 IBB C5 C6 DOUB Y N 14 IBB C5 H5 SING N N 15 IBB C6 C7 SING Y N 16 IBB C6 H6 SING N N 17 IBB C7 C8 DOUB Y N 18 IBB C7 N4 SING Y N 19 IBB C8 C9 SING Y N 20 IBB C8 N3 SING Y N 21 IBB C9 H9 SING N N 22 IBB C10 C22 SING Y N 23 IBB C10 N3 SING Y N 24 IBB C10 N4 DOUB Y N 25 IBB C11 C12 DOUB Y N 26 IBB C11 C23 SING Y N 27 IBB C11 N6 SING Y N 28 IBB C12 C13 SING Y N 29 IBB C12 N5 SING Y N 30 IBB C13 C14 DOUB Y N 31 IBB C13 H13 SING N N 32 IBB C14 C22 SING Y N 33 IBB C14 H14 SING N N 34 IBB C15 C16 SING Y N 35 IBB C15 N5 DOUB Y N 36 IBB C15 N6 SING Y N 37 IBB C16 C17 SING Y N 38 IBB C16 C21 DOUB Y N 39 IBB C17 C18 DOUB Y N 40 IBB C17 H17 SING N N 41 IBB C18 C19 SING Y N 42 IBB C18 H18 SING N N 43 IBB C19 C20 DOUB Y N 44 IBB C19 O1 SING N N 45 IBB C20 C21 SING Y N 46 IBB C20 H20 SING N N 47 IBB C21 H21 SING N N 48 IBB C22 C23 DOUB Y N 49 IBB C23 H23 SING N N 50 IBB N1 HN1 SING N N 51 IBB N2 HN2 SING N N 52 IBB N3 HN3 SING N N 53 IBB N6 HN6 SING N N 54 IBB O1 HO1 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IBB SMILES ACDLabs 10.04 "Oc1ccc(cc1)c3nc2ccc(cc2n3)c4nc5c(n4)cc(cc5)C6NCCN6" IBB SMILES_CANONICAL CACTVS 3.341 "Oc1ccc(cc1)c2[nH]c3cc(ccc3n2)c4[nH]c5cc(ccc5n4)C6NCCN6" IBB SMILES CACTVS 3.341 "Oc1ccc(cc1)c2[nH]c3cc(ccc3n2)c4[nH]c5cc(ccc5n4)C6NCCN6" IBB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1c2[nH]c3cc(ccc3n2)c4[nH]c5cc(ccc5n4)C6NCCN6)O" IBB SMILES "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1c2[nH]c3cc(ccc3n2)c4[nH]c5cc(ccc5n4)C6NCCN6)O" IBB InChI InChI 1.03 "InChI=1S/C23H20N6O/c30-16-5-1-13(2-6-16)22-26-17-8-4-15(12-20(17)28-22)23-27-18-7-3-14(11-19(18)29-23)21-24-9-10-25-21/h1-8,11-12,21,24-25,30H,9-10H2,(H,26,28)(H,27,29)" IBB InChIKey InChI 1.03 SOARWAXWPUGSQA-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier IBB "SYSTEMATIC NAME" ACDLabs 10.04 "4-(6-imidazolidin-2-yl-1H,3'H-2,5'-bibenzimidazol-2'-yl)phenol" IBB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "4-[6-(6-imidazolidin-2-yl-1H-benzimidazol-2-yl)-1H-benzimidazol-2-yl]phenol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IBB "Create component" 1999-07-08 RCSB IBB "Modify aromatic_flag" 2011-06-04 RCSB IBB "Modify descriptor" 2011-06-04 RCSB #