data_IE3 # _chem_comp.id IE3 _chem_comp.name "[3-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]sulfanyl-4-methoxy-phenyl]-(3,4,5-trimethoxyphenyl)methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H28 O10 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-03-11 _chem_comp.pdbx_modified_date 2023-01-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 496.527 _chem_comp.one_letter_code ? _chem_comp.three_letter_code IE3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7Z63 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal IE3 S1 S1 S 0 1 N N N 25.498 8.518 100.633 3.361 -1.732 0.072 S1 IE3 1 IE3 C10 C1 C 0 1 Y N N 24.639 7.561 101.745 1.630 -1.916 0.344 C10 IE3 2 IE3 C11 C2 C 0 1 Y N N 25.474 6.642 102.534 1.035 -3.176 0.235 C11 IE3 3 IE3 C12 C3 C 0 1 Y N N 24.853 5.830 103.475 -0.328 -3.324 0.449 C12 IE3 4 IE3 C13 C4 C 0 1 Y N N 23.461 5.845 103.596 -1.102 -2.229 0.770 C13 IE3 5 IE3 C14 C5 C 0 1 Y N N 22.678 6.716 102.867 -0.515 -0.966 0.881 C14 IE3 6 IE3 C15 C6 C 0 1 Y N N 23.270 7.556 101.909 0.859 -0.815 0.671 C15 IE3 7 IE3 O7 O1 O 0 1 N N N 26.803 6.696 102.354 1.793 -4.258 -0.081 O7 IE3 8 IE3 C16 C7 C 0 1 N N N 27.764 6.205 103.305 1.121 -5.515 -0.176 C16 IE3 9 IE3 C17 C8 C 0 1 N N N 21.221 6.813 103.037 -1.343 0.206 1.223 C17 IE3 10 IE3 O8 O2 O 0 1 N N N 20.728 7.921 102.801 -0.879 1.101 1.904 O8 IE3 11 IE3 C18 C9 C 0 1 Y N N 20.322 5.703 103.486 -2.734 0.293 0.739 C18 IE3 12 IE3 C19 C10 C 0 1 Y N N 20.620 4.369 103.208 -3.569 1.321 1.188 C19 IE3 13 IE3 C20 C11 C 0 1 Y N N 19.757 3.364 103.657 -4.871 1.400 0.733 C20 IE3 14 IE3 C21 C12 C 0 1 Y N N 18.524 3.710 104.365 -5.352 0.457 -0.172 C21 IE3 15 IE3 C22 C13 C 0 1 Y N N 18.247 5.121 104.615 -4.523 -0.568 -0.621 C22 IE3 16 IE3 C23 C14 C 0 1 Y N N 19.143 6.075 104.153 -3.218 -0.648 -0.174 C23 IE3 17 IE3 O11 O3 O 0 1 N N N 17.098 5.438 105.290 -4.997 -1.487 -1.504 O11 IE3 18 IE3 O10 O4 O 0 1 N N N 17.629 2.751 104.740 -6.634 0.537 -0.617 O10 IE3 19 IE3 O9 O5 O 0 1 N N N 20.018 2.019 103.378 -5.683 2.400 1.169 O9 IE3 20 IE3 C26 C15 C 0 1 N N N 16.687 6.819 105.362 -4.092 -2.511 -1.922 C26 IE3 21 IE3 C25 C16 C 0 1 N N N 17.411 2.573 106.159 -6.863 1.309 -1.798 C25 IE3 22 IE3 C24 C17 C 0 1 N N N 21.415 1.721 103.121 -5.124 3.332 2.097 C24 IE3 23 IE3 C1 C18 C 0 1 N N S 24.316 9.665 99.959 3.628 0.043 0.334 C1 IE3 24 IE3 O5 O6 O 0 1 N N N 23.662 9.043 98.842 2.936 0.783 -0.673 O5 IE3 25 IE3 C5 C19 C 0 1 N N R 22.685 9.869 98.210 3.060 2.201 -0.544 C5 IE3 26 IE3 C6 C20 C 0 1 N N N 22.207 9.133 97.046 2.259 2.886 -1.654 C6 IE3 27 IE3 O6 O7 O 0 1 N N N 21.337 8.092 97.495 0.868 2.610 -1.477 O6 IE3 28 IE3 C4 C21 C 0 1 N N R 23.291 11.192 97.748 4.534 2.596 -0.660 C4 IE3 29 IE3 O4 O8 O 0 1 N N N 24.242 10.929 96.681 5.025 2.235 -1.953 O4 IE3 30 IE3 C3 C22 C 0 1 N N S 24.075 11.867 98.843 5.338 1.859 0.415 C3 IE3 31 IE3 O3 O9 O 0 1 N N N 24.791 13.030 98.369 6.726 2.165 0.268 O3 IE3 32 IE3 C2 C23 C 0 1 N N R 25.038 10.879 99.462 5.126 0.351 0.254 C2 IE3 33 IE3 O2 O10 O 0 1 N N N 25.683 11.558 100.490 5.813 -0.343 1.297 O2 IE3 34 IE3 H1 H1 H 0 1 N N N 25.445 5.189 104.111 -0.783 -4.299 0.363 H1 IE3 35 IE3 H2 H2 H 0 1 N N N 22.985 5.156 104.279 -2.162 -2.348 0.935 H2 IE3 36 IE3 H3 H3 H 0 1 N N N 22.652 8.199 101.300 1.317 0.159 0.760 H3 IE3 37 IE3 H4 H4 H 0 1 N N N 28.780 6.369 102.918 1.840 -6.293 -0.434 H4 IE3 38 IE3 H5 H5 H 0 1 N N N 27.644 6.742 104.258 0.657 -5.752 0.781 H5 IE3 39 IE3 H6 H6 H 0 1 N N N 27.602 5.129 103.467 0.353 -5.459 -0.948 H6 IE3 40 IE3 H7 H7 H 0 1 N N N 21.509 4.114 102.651 -3.196 2.053 1.890 H7 IE3 41 IE3 H8 H8 H 0 1 N N N 18.930 7.122 104.309 -2.574 -1.441 -0.525 H8 IE3 42 IE3 H9 H9 H 0 1 N N N 15.752 6.894 105.936 -4.595 -3.176 -2.624 H9 IE3 43 IE3 H10 H10 H 0 1 N N N 17.471 7.409 105.859 -3.228 -2.057 -2.407 H10 IE3 44 IE3 H11 H11 H 0 1 N N N 16.525 7.207 104.345 -3.763 -3.082 -1.054 H11 IE3 45 IE3 H12 H12 H 0 1 N N N 16.672 1.775 106.320 -6.292 0.887 -2.624 H12 IE3 46 IE3 H13 H13 H 0 1 N N N 18.359 2.297 106.644 -7.925 1.290 -2.043 H13 IE3 47 IE3 H14 H14 H 0 1 N N N 17.037 3.512 106.593 -6.548 2.338 -1.626 H14 IE3 48 IE3 H15 H15 H 0 1 N N N 21.529 0.647 102.912 -4.803 2.803 2.994 H15 IE3 49 IE3 H16 H16 H 0 1 N N N 21.760 2.302 102.253 -4.268 3.829 1.641 H16 IE3 50 IE3 H17 H17 H 0 1 N N N 22.015 1.988 104.003 -5.876 4.075 2.363 H17 IE3 51 IE3 H18 H18 H 0 1 N N N 23.609 9.925 100.760 3.251 0.326 1.317 H18 IE3 52 IE3 H19 H19 H 0 1 N N N 21.850 10.074 98.896 2.675 2.512 0.427 H19 IE3 53 IE3 H20 H20 H 0 1 N N N 23.061 8.697 96.506 2.424 3.962 -1.610 H20 IE3 54 IE3 H21 H21 H 0 1 N N N 21.659 9.812 96.377 2.584 2.508 -2.623 H21 IE3 55 IE3 H22 H22 H 0 1 N N N 21.016 7.602 96.747 0.299 3.014 -2.146 H22 IE3 56 IE3 H23 H23 H 0 1 N N N 22.491 11.860 97.396 4.635 3.672 -0.518 H23 IE3 57 IE3 H24 H24 H 0 1 N N N 24.624 11.748 96.388 5.955 2.457 -2.097 H24 IE3 58 IE3 H25 H25 H 0 1 N N N 23.366 12.182 99.623 4.997 2.171 1.403 H25 IE3 59 IE3 H26 H26 H 0 1 N N N 25.270 13.423 99.089 7.296 1.731 0.919 H26 IE3 60 IE3 H27 H27 H 0 1 N N N 25.764 10.570 98.695 5.512 0.031 -0.714 H27 IE3 61 IE3 H28 H28 H 0 1 N N N 26.303 10.977 100.914 5.721 -1.305 1.256 H28 IE3 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal IE3 O4 C4 SING N N 1 IE3 C6 O6 SING N N 2 IE3 C6 C5 SING N N 3 IE3 C4 C5 SING N N 4 IE3 C4 C3 SING N N 5 IE3 C5 O5 SING N N 6 IE3 O3 C3 SING N N 7 IE3 O5 C1 SING N N 8 IE3 C3 C2 SING N N 9 IE3 C2 C1 SING N N 10 IE3 C2 O2 SING N N 11 IE3 C1 S1 SING N N 12 IE3 S1 C10 SING N N 13 IE3 C10 C15 DOUB Y N 14 IE3 C10 C11 SING Y N 15 IE3 C15 C14 SING Y N 16 IE3 O7 C11 SING N N 17 IE3 O7 C16 SING N N 18 IE3 C11 C12 DOUB Y N 19 IE3 O8 C17 DOUB N N 20 IE3 C14 C17 SING N N 21 IE3 C14 C13 DOUB Y N 22 IE3 C17 C18 SING N N 23 IE3 C24 O9 SING N N 24 IE3 C19 C18 DOUB Y N 25 IE3 C19 C20 SING Y N 26 IE3 O9 C20 SING N N 27 IE3 C12 C13 SING Y N 28 IE3 C18 C23 SING Y N 29 IE3 C20 C21 DOUB Y N 30 IE3 C23 C22 DOUB Y N 31 IE3 C21 C22 SING Y N 32 IE3 C21 O10 SING N N 33 IE3 C22 O11 SING N N 34 IE3 O10 C25 SING N N 35 IE3 O11 C26 SING N N 36 IE3 C12 H1 SING N N 37 IE3 C13 H2 SING N N 38 IE3 C15 H3 SING N N 39 IE3 C16 H4 SING N N 40 IE3 C16 H5 SING N N 41 IE3 C16 H6 SING N N 42 IE3 C19 H7 SING N N 43 IE3 C23 H8 SING N N 44 IE3 C26 H9 SING N N 45 IE3 C26 H10 SING N N 46 IE3 C26 H11 SING N N 47 IE3 C25 H12 SING N N 48 IE3 C25 H13 SING N N 49 IE3 C25 H14 SING N N 50 IE3 C24 H15 SING N N 51 IE3 C24 H16 SING N N 52 IE3 C24 H17 SING N N 53 IE3 C1 H18 SING N N 54 IE3 C5 H19 SING N N 55 IE3 C6 H20 SING N N 56 IE3 C6 H21 SING N N 57 IE3 O6 H22 SING N N 58 IE3 C4 H23 SING N N 59 IE3 O4 H24 SING N N 60 IE3 C3 H25 SING N N 61 IE3 O3 H26 SING N N 62 IE3 C2 H27 SING N N 63 IE3 O2 H28 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor IE3 InChI InChI 1.06 "InChI=1S/C23H28O10S/c1-29-13-6-5-11(18(25)12-7-14(30-2)22(32-4)15(8-12)31-3)9-17(13)34-23-21(28)20(27)19(26)16(10-24)33-23/h5-9,16,19-21,23-24,26-28H,10H2,1-4H3/t16-,19+,20+,21-,23+/m1/s1" IE3 InChIKey InChI 1.06 MGBZLSXWJZVCBJ-YNIWLMFPSA-N IE3 SMILES_CANONICAL CACTVS 3.385 "COc1ccc(cc1S[C@@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O)C(=O)c3cc(OC)c(OC)c(OC)c3" IE3 SMILES CACTVS 3.385 "COc1ccc(cc1S[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O)C(=O)c3cc(OC)c(OC)c(OC)c3" IE3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1S[C@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O)C(=O)c3cc(c(c(c3)OC)OC)OC" IE3 SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1SC2C(C(C(C(O2)CO)O)O)O)C(=O)c3cc(c(c(c3)OC)OC)OC" # _pdbx_chem_comp_identifier.comp_id IE3 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[3-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]sulfanyl-4-methoxy-phenyl]-(3,4,5-trimethoxyphenyl)methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site IE3 "Create component" 2022-03-11 PDBE IE3 "Modify descriptor" 2022-08-22 RCSB IE3 "Initial release" 2023-01-18 RCSB #