data_IGT
#
_chem_comp.id IGT
_chem_comp.name 5-azanyl-3,6-dimethyl-1H-pyrimidine-2,4-dione
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C6 H9 N3 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-03-21
_chem_comp.pdbx_modified_date 2022-08-22
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 155.155
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code IGT
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7Z92
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
IGT C10 C1 C 0 1 N N N 18.369 -25.931 11.751 -0.145 -1.112 0.003 C10 IGT 1
IGT C01 C2 C 0 1 N N N 19.572 -23.657 11.728 -2.571 -0.899 -0.003 C01 IGT 2
IGT C03 C3 C 0 1 N N N 17.176 -23.786 11.047 -1.086 1.028 0.001 C03 IGT 3
IGT C06 C4 C 0 1 N N N 15.857 -25.950 11.052 1.267 0.817 0.001 C06 IGT 4
IGT C07 C5 C 0 1 N N N 14.543 -26.668 10.793 2.629 1.462 -0.002 C07 IGT 5
IGT C08 C6 C 0 1 N N N 17.089 -26.685 11.506 1.151 -0.531 0.000 C08 IGT 6
IGT N02 N1 N 0 1 N N N 18.390 -24.486 11.522 -1.229 -0.310 0.000 N02 IGT 7
IGT N05 N2 N 0 1 N N N 15.911 -24.526 10.811 0.134 1.595 0.003 N05 IGT 8
IGT N09 N3 N 0 1 N N N 17.054 -28.122 11.728 2.298 -1.346 -0.002 N09 IGT 9
IGT O04 O1 O 0 1 N N N 17.232 -22.616 10.885 -2.075 1.736 -0.001 O04 IGT 10
IGT O11 O2 O 0 1 N N N 19.330 -26.531 12.145 -0.277 -2.322 0.002 O11 IGT 11
IGT H1 H1 H 0 1 N N N 20.404 -24.285 12.079 -3.316 -0.104 -0.004 H1 IGT 12
IGT H2 H2 H 0 1 N N N 19.851 -23.175 10.780 -2.695 -1.515 -0.893 H2 IGT 13
IGT H3 H3 H 0 1 N N N 19.352 -22.886 12.481 -2.699 -1.515 0.887 H3 IGT 14
IGT H4 H4 H 0 1 N N N 14.658 -27.738 11.020 2.956 1.617 -1.030 H4 IGT 15
IGT H5 H5 H 0 1 N N N 13.759 -26.240 11.434 2.578 2.421 0.513 H5 IGT 16
IGT H6 H6 H 0 1 N N N 14.261 -26.546 9.737 3.339 0.812 0.511 H6 IGT 17
IGT H8 H8 H 0 1 N N N 17.956 -28.436 12.024 3.180 -0.942 -0.004 H8 IGT 18
IGT H9 H9 H 0 1 N N N 16.379 -28.334 12.435 2.207 -2.311 -0.002 H9 IGT 19
IGT H7 H7 H 0 1 N N N 15.099 -24.041 10.486 0.215 2.562 0.003 H7 IGT 20
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
IGT C07 C06 SING N N 1
IGT N05 C03 SING N N 2
IGT N05 C06 SING N N 3
IGT O04 C03 DOUB N N 4
IGT C03 N02 SING N N 5
IGT C06 C08 DOUB N N 6
IGT C08 N09 SING N N 7
IGT C08 C10 SING N N 8
IGT N02 C01 SING N N 9
IGT N02 C10 SING N N 10
IGT C10 O11 DOUB N N 11
IGT C01 H1 SING N N 12
IGT C01 H2 SING N N 13
IGT C01 H3 SING N N 14
IGT C07 H4 SING N N 15
IGT C07 H5 SING N N 16
IGT C07 H6 SING N N 17
IGT N09 H8 SING N N 18
IGT N09 H9 SING N N 19
IGT N05 H7 SING N N 20
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
IGT InChI InChI 1.06 "InChI=1S/C6H9N3O2/c1-3-4(7)5(10)9(2)6(11)8-3/h7H2,1-2H3,(H,8,11)"
IGT InChIKey InChI 1.06 DMYXWQPNMMVHBF-UHFFFAOYSA-N
IGT SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)NC(=C(N)C1=O)C"
IGT SMILES CACTVS 3.385 "CN1C(=O)NC(=C(N)C1=O)C"
IGT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=C(C(=O)N(C(=O)N1)C)N"
IGT SMILES "OpenEye OEToolkits" 2.0.7 "CC1=C(C(=O)N(C(=O)N1)C)N"
#
_pdbx_chem_comp_identifier.comp_id IGT
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "5-azanyl-3,6-dimethyl-1~{H}-pyrimidine-2,4-dione"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
IGT "Create component" 2022-03-21 PDBE
IGT "Modify aromatic_flag" 2022-03-22 PDBE
IGT "Initial release" 2022-03-30 RCSB
IGT "Modify descriptor" 2022-08-22 RCSB
#