data_IJB
#
_chem_comp.id IJB
_chem_comp.name "4-[(~{E})-(6-azanyl-2-oxidanylidene-1~{H}-indol-3-ylidene)methyl]benzoic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C16 H12 N2 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-03-22
_chem_comp.pdbx_modified_date 2023-01-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 280.278
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code IJB
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7Z6U
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
IJB C1 C1 C 0 1 N N N 120.901 207.005 -4.061 1.559 -1.496 0.007 C1 IJB 1
IJB C2 C2 C 0 1 Y N N 121.130 206.277 -5.302 1.746 -0.031 -0.100 C2 IJB 2
IJB C3 C3 C 0 1 Y N N 121.383 207.239 -6.300 3.123 0.202 0.025 C3 IJB 3
IJB C4 C4 C 0 1 Y N N 121.679 206.876 -7.611 3.595 1.507 -0.033 C4 IJB 4
IJB C5 C5 C 0 1 Y N N 121.753 205.522 -7.942 2.711 2.559 -0.218 C5 IJB 5
IJB C6 C6 C 0 1 Y N N 121.488 204.560 -6.951 1.346 2.319 -0.347 C6 IJB 6
IJB C7 C7 C 0 1 Y N N 121.181 204.931 -5.652 0.863 1.030 -0.284 C7 IJB 7
IJB C8 C8 C 0 1 N N N 120.587 206.680 -2.796 0.388 -2.189 -0.056 C8 IJB 8
IJB C9 C9 C 0 1 Y N N 120.357 205.363 -2.190 -0.893 -1.472 -0.022 C9 IJB 9
IJB C10 C10 C 0 1 Y N N 120.855 205.043 -0.926 -1.919 -1.828 -0.907 C10 IJB 10
IJB C11 C11 C 0 1 Y N N 120.631 203.799 -0.360 -3.115 -1.157 -0.874 C11 IJB 11
IJB C12 C12 C 0 1 Y N N 119.907 202.829 -1.042 -3.309 -0.119 0.042 C12 IJB 12
IJB C13 C13 C 0 1 N N N 119.733 201.464 -0.470 -4.598 0.602 0.076 C13 IJB 13
IJB C14 C14 C 0 1 Y N N 119.402 203.140 -2.300 -2.286 0.237 0.925 C14 IJB 14
IJB C15 C15 C 0 1 Y N N 119.626 204.385 -2.863 -1.092 -0.435 0.898 C15 IJB 15
IJB O1 O1 O 0 1 N N N 120.327 201.276 0.684 -4.787 1.602 0.958 O1 IJB 16
IJB N1 N1 N 0 1 N N N 122.151 205.128 -9.228 3.192 3.868 -0.274 N1 IJB 17
IJB O2 O2 O 0 1 N N N 119.075 200.595 -1.050 -5.488 0.292 -0.691 O2 IJB 18
IJB N N2 N 0 1 N N N 121.333 208.513 -5.742 3.780 -1.011 0.199 N IJB 19
IJB C C16 C 0 1 N N N 121.065 208.454 -4.417 2.919 -2.042 0.191 C IJB 20
IJB O O3 O 0 1 N N N 121.009 209.420 -3.654 3.207 -3.217 0.321 O IJB 21
IJB H1 H1 H 0 1 N N N 121.849 207.633 -8.363 4.653 1.702 0.067 H1 IJB 22
IJB H2 H2 H 0 1 N N N 121.525 203.512 -7.208 0.664 3.144 -0.491 H2 IJB 23
IJB H3 H3 H 0 1 N N N 120.981 204.173 -4.909 -0.195 0.842 -0.384 H3 IJB 24
IJB H4 H4 H 0 1 N N N 120.489 207.517 -2.121 0.402 -3.266 -0.131 H4 IJB 25
IJB H5 H5 H 0 1 N N N 121.426 205.779 -0.379 -1.769 -2.629 -1.615 H5 IJB 26
IJB H6 H6 H 0 1 N N N 121.023 203.581 0.622 -3.906 -1.431 -1.556 H6 IJB 27
IJB H7 H7 H 0 1 N N N 118.829 202.403 -2.843 -2.439 1.040 1.632 H7 IJB 28
IJB H8 H8 H 0 1 N N N 119.227 204.603 -3.843 -0.302 -0.159 1.581 H8 IJB 29
IJB H9 H9 H 0 1 N N N 120.167 200.388 0.982 -5.647 2.045 0.943 H9 IJB 30
IJB H10 H10 H 0 1 N N N 122.147 204.130 -9.287 4.143 4.039 -0.183 H10 IJB 31
IJB H11 H11 H 0 1 N N N 121.517 205.504 -9.903 2.577 4.606 -0.403 H11 IJB 32
IJB H12 H12 H 0 1 N N N 121.476 209.361 -6.253 4.740 -1.102 0.308 H12 IJB 33
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
IJB N1 C5 SING N N 1
IJB C5 C4 DOUB Y N 2
IJB C5 C6 SING Y N 3
IJB C4 C3 SING Y N 4
IJB C6 C7 DOUB Y N 5
IJB C3 N SING N N 6
IJB C3 C2 DOUB Y N 7
IJB N C SING N N 8
IJB C7 C2 SING Y N 9
IJB C2 C1 SING N N 10
IJB C C1 SING N N 11
IJB C O DOUB N N 12
IJB C1 C8 DOUB N E 13
IJB C15 C14 DOUB Y N 14
IJB C15 C9 SING Y N 15
IJB C8 C9 SING N N 16
IJB C14 C12 SING Y N 17
IJB C9 C10 DOUB Y N 18
IJB O2 C13 DOUB N N 19
IJB C12 C13 SING N N 20
IJB C12 C11 DOUB Y N 21
IJB C10 C11 SING Y N 22
IJB C13 O1 SING N N 23
IJB C4 H1 SING N N 24
IJB C6 H2 SING N N 25
IJB C7 H3 SING N N 26
IJB C8 H4 SING N N 27
IJB C10 H5 SING N N 28
IJB C11 H6 SING N N 29
IJB C14 H7 SING N N 30
IJB C15 H8 SING N N 31
IJB O1 H9 SING N N 32
IJB N1 H10 SING N N 33
IJB N1 H11 SING N N 34
IJB N H12 SING N N 35
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
IJB InChI InChI 1.06 "InChI=1S/C16H12N2O3/c17-11-5-6-12-13(15(19)18-14(12)8-11)7-9-1-3-10(4-2-9)16(20)21/h1-8H,17H2,(H,18,19)(H,20,21)/b13-7+"
IJB InChIKey InChI 1.06 ZHACTBVJLNRYNH-NTUHNPAUSA-N
IJB SMILES_CANONICAL CACTVS 3.385 "Nc1ccc\2c(NC(=O)C\2=C/c3ccc(cc3)C(O)=O)c1"
IJB SMILES CACTVS 3.385 "Nc1ccc2c(NC(=O)C2=Cc3ccc(cc3)C(O)=O)c1"
IJB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1/C=C/2\c3ccc(cc3NC2=O)N)C(=O)O"
IJB SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C=C2c3ccc(cc3NC2=O)N)C(=O)O"
#
_pdbx_chem_comp_identifier.comp_id IJB
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "4-[(~{E})-(6-azanyl-2-oxidanylidene-1~{H}-indol-3-ylidene)methyl]benzoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
IJB "Create component" 2022-03-22 PDBE
IJB "Modify descriptor" 2022-08-22 RCSB
IJB "Initial release" 2023-02-01 RCSB
#